CN185735
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_RHOSR (50S ribosomal protein L17 OS=Rhodococcus sp. (strain RHA1) GN=rplQ PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.792e-22 Identity = 49/98 (50.00%), Postives = 68/98 (69.39%), Query Frame = -2 Query: 172 RRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 465 ++ +F L T L +HGRI T ++A A+R Y +K++T AK G+L RR+ L I K +VH LFAE+ Y +R+GGYTRII+T+PR GDN P+A IE Sbjct: 17 QKAIFANLATALFEHGRITTTESKAKALRPYAEKLVTHAKAGTLAHRREVLKVIRNKDVVHTLFAEIGPFYADRDGGYTRIIKTVPRKGDNAPMAIIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_RHOOB (50S ribosomal protein L17 OS=Rhodococcus opacus (strain B4) GN=rplQ PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.792e-22 Identity = 49/98 (50.00%), Postives = 68/98 (69.39%), Query Frame = -2 Query: 172 RRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 465 ++ +F L T L +HGRI T ++A A+R Y +K++T AK G+L RR+ L I K +VH LFAE+ Y +R+GGYTRII+T+PR GDN P+A IE Sbjct: 17 QKAIFANLATALFEHGRITTTESKAKALRPYAEKLVTHAKAGTLAHRREVLKVIRNKDVVHTLFAEIGPFYADRDGGYTRIIKTVPRKGDNAPMAIIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_CLOK5 (50S ribosomal protein L17 OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=rplQ PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.952e-22 Identity = 51/106 (48.11%), Postives = 64/106 (60.38%), Query Frame = -2 Query: 172 KLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 489 KL P D RR + L T LKHG+I+T RA R +KMITLAK G LH RRQ L F+ E+++V LF + +Y ERNGGYTR+ + PR GD L +E Sbjct: 6 KLGLPSDHRRAMLRNLVTSFLKHGKIQTTVTRAKEARSLAEKMITLAKRGDLHARRQVLSFVTEEEVVKNLFTNIAPKYAERNGGYTRMYKIGPRRGDGAELVILE 111
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_CLOK1 (50S ribosomal protein L17 OS=Clostridium kluyveri (strain NBRC 12016) GN=rplQ PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.952e-22 Identity = 51/106 (48.11%), Postives = 64/106 (60.38%), Query Frame = -2 Query: 172 KLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 489 KL P D RR + L T LKHG+I+T RA R +KMITLAK G LH RRQ L F+ E+++V LF + +Y ERNGGYTR+ + PR GD L +E Sbjct: 6 KLGLPSDHRRAMLRNLVTSFLKHGKIQTTVTRAKEARSLAEKMITLAKRGDLHARRQVLSFVTEEEVVKNLFTNIAPKYAERNGGYTRMYKIGPRRGDGAELVILE 111
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_SYMTH (50S ribosomal protein L17 OS=Symbiobacterium thermophilum GN=rplQ PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22 Identity = 52/106 (49.06%), Postives = 69/106 (65.09%), Query Frame = -2 Query: 172 KLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 489 KL R R+ LF + T L RI+T A+A AV+ ++MITLAK G LH RRQAL +IY++ +V LF ++ RY +RNGGYTR+IRT R GD P+A +E Sbjct: 6 KLGRDSSARKALFRAVVTALFDKERIETTEAKAKAVQSIAEEMITLAKRGDLHARRQALAYIYDESVVTKLFNQIAPRYADRNGGYTRVIRTGVRKGDAAPMAILE 111
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_NOCFA (50S ribosomal protein L17 OS=Nocardia farcinica GN=rplQ PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22 Identity = 51/98 (52.04%), Postives = 66/98 (67.35%), Query Frame = -2 Query: 172 RRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 465 ++ +F L T L +HGRI T A+A AVR Y +K+IT AK G+L RR+ L I K +VH+LFAE+ + R GGYTRI +TLPR GDN P+A IE Sbjct: 17 QKAIFANLATALFEHGRITTTEAKAKAVRPYAEKLITKAKAGTLADRREVLKVIRNKDVVHSLFAEIGPSFEGREGGYTRITKTLPRKGDNAPMAIIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_MYCVP (50S ribosomal protein L17 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=rplQ PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22 Identity = 50/107 (46.73%), Postives = 69/107 (64.49%), Query Frame = -2 Query: 172 PKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 492 P+L ++ L L T L +HGRIKT +A A+R Y +K+IT AK G+LH RR+ + I +K +VH LFAE+ + +R+GGYTRII+ R GDN P+A IE Sbjct: 8 PRLGGSSSHQKALLANLATSLFEHGRIKTTEPKARALRPYAEKLITHAKKGTLHNRREVMKKIRDKDVVHVLFAEIGPFFADRSGGYTRIIKVENRKGDNAPMAVIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_CALS8 (50S ribosomal protein L17 OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=rplQ PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22 Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = -2 Query: 172 RVPKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 498 ++ KL R D R+ L L T L KHGRI T A+A +R+ +K+IT+AK G L R+ LG++YE+ + + LF ++ RY RNGGYTRII+ PR GD + YIE Sbjct: 3 KLRKLKRDTDHRQALMRNLATSLFKHGRIMTTEAKAKDLRRVAEKLITIAKKGDLASYRRVLGYLYEEDVAYDLFQKIAPRYQGRNGGYTRIIKVGPRKGDGAMMVYIE 111
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_ANATD (50S ribosomal protein L17 OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=rplQ PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22 Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = -2 Query: 172 RVPKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 498 ++ KL R D R+ L L T L KHGRI T A+A +R+ +K+IT+AK G L R+ LG++YE+ + + LF ++ RY RNGGYTRII+ PR GD + YIE Sbjct: 3 KLRKLKRDTDHRQALMRNLATSLFKHGRIMTTEAKAKDLRRIAEKLITIAKKGDLASYRRVLGYLYEEDVAYDLFQKIAPRYQGRNGGYTRIIKVGPRKGDGAMMVYIE 111
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_MYCLE (50S ribosomal protein L17 OS=Mycobacterium leprae GN=rplQ PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.441e-21 Identity = 50/107 (46.73%), Postives = 69/107 (64.49%), Query Frame = -2 Query: 172 PKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 492 P+L ++ L L L +HGRIKT +A A+R Y +K+IT AK G+LH RR+ L + +K +VHALFAE+ + +R+GGYTRII+ R GDN P+A IE Sbjct: 8 PRLGGSSSHQKALLTNLAASLFEHGRIKTTEPKARALRPYAEKLITHAKKGTLHNRREVLKKLPDKDVVHALFAEIGPFFSDRDGGYTRIIKVEARKGDNAPMAVIE 114 The following BLAST results are available for this feature:
BLAST of CN185735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185735 ID=CN185735; Name=CN185735; organism=Citrus sinensis; type=EST; length=718bpback to top |