CN185735
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_MOOTA (50S ribosomal protein L17 OS=Moorella thermoacetica (strain ATCC 39073) GN=rplQ PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.339e-21 Identity = 48/106 (45.28%), Postives = 67/106 (63.21%), Query Frame = -2 Query: 172 KLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 489 KL R R+ + + T LLKHG+I+T RA ++ +KMITL K G LH RRQAL ++ ++ +V LF E+ RY ++NGGYTRI++T R GD P+ IE Sbjct: 5 KLGRLAGHRKMMLRNIVTSLLKHGKIETTELRAKELKSLAEKMITLGKRGDLHSRRQALAYLLDEDVVTKLFKEIGPRYADKNGGYTRIVKTGFRQGDGAPMVLIE 110
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_CLOTE (50S ribosomal protein L17 OS=Clostridium tetani GN=rplQ PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.593e-20 Identity = 49/106 (46.23%), Postives = 64/106 (60.38%), Query Frame = -2 Query: 172 KLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 489 KL RP DQR + T LLK G+I+T RA R +KMITL K G L RRQAL F+ E+++V LF ++ +Y ERNGGYTR+ + PR GD + +E Sbjct: 6 KLGRPTDQRMAMLRNQVTSLLKSGKIETTVTRAKETRSLAEKMITLGKRGDLQARRQALSFVTEEEVVKRLFDDIAPKYAERNGGYTRMYKVGPRRGDGAEIVILE 111
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_CAUSK (50S ribosomal protein L17 OS=Caulobacter sp. (strain K31) GN=rplQ PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.593e-20 Identity = 50/114 (43.86%), Postives = 70/114 (61.40%), Query Frame = -2 Query: 172 MRHGRRVPKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 513 MRHG+ KL R R +F ++ L+KH +I T +A +R +V+K++TLAK G LH RRQA+ + + + V LFA + RY ER GGY R+++ R GDN PLA IE Sbjct: 1 MRHGKAHRKLGRTSAHRTAMFANMSASLIKHEQIVTTLPKAKELRPFVEKLVTLAKRGDLHARRQAISIVRDVEQVGKLFAAIGPRYKERQGGYIRVLKAGFRYGDNAPLAVIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_CARHZ (50S ribosomal protein L17 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rplQ PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.593e-20 Identity = 47/106 (44.34%), Postives = 66/106 (62.26%), Query Frame = -2 Query: 172 KLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 489 KL R D R + L T LLK G+I T AR + + +K+ITLAK+ +LH RRQAL ++YE+ +V LF E+ +Y +R GGYTRI++ PR GD + +E Sbjct: 5 KLGRRKDHREAMLRNLVTSLLKEGKIITTEARGKSAKAVAEKLITLAKNDTLHNRRQALAYLYEENVVRKLFKEIGPKYADRPGGYTRIVKIGPRRGDGAMMVLVE 110
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_STRMU (50S ribosomal protein L17 OS=Streptococcus mutans GN=rplQ PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.081e-20 Identity = 56/122 (45.90%), Postives = 70/122 (57.38%), Query Frame = -2 Query: 172 KLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEK----------------QIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 489 KL R QR+ +F LTT LL + I T ARA +RK V+KMITL K G+LH RRQA F+ + + LF+E+ RY ERNGGYTRI++T PR GD P+A IE Sbjct: 5 KLGRTSSQRKAMFRDLTTDLLINESIVTTEARAKEIRKTVEKMITLGKRGNLHARRQAAAFVRNEIASESYDEAKDEYTSTTALQKLFSEIAPRYAERNGGYTRILKTEPRRGDAAPMAIIE 126
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_PHEZH (50S ribosomal protein L17 OS=Phenylobacterium zucineum (strain HLK1) GN=rplQ PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.081e-20 Identity = 49/114 (42.98%), Postives = 71/114 (62.28%), Query Frame = -2 Query: 172 MRHGRRVPKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 513 MRHG+ KL R R +F ++ L+KH +I T +A +R +V+K++TLAK G LH RRQA+ + + + V LFA + RY +RNGGY R+++ R GDN P+A IE Sbjct: 1 MRHGKAHRKLGRTSAHRTAMFANMSASLIKHEQIVTTLPKAKELRPFVEKLVTLAKRGDLHARRQAISHVRDVEQVGKLFAVLGPRYKDRNGGYIRVLKAGYRHGDNAPMAVIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_SACEN (50S ribosomal protein L17 OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=rplQ PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.717e-20 Identity = 45/105 (42.86%), Postives = 65/105 (61.90%), Query Frame = -2 Query: 175 KLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYI 489 +L P R + L T L +HG+I T A+A +R +++IT AK G LH RR+ + I +K +VH LFAE+ + +RNGGYTRI++ +PR GDN +A I Sbjct: 9 RLGGSPSHERLMLANLATSLFEHGKITTTEAKAKRLRPLAERLITKAKKGDLHNRREVMKTIRDKDVVHKLFAEIGPHFADRNGGYTRIVKAMPRRGDNAKMAVI 113
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_ALKOO (50S ribosomal protein L17 OS=Alkaliphilus oremlandii (strain OhILAs) GN=rplQ PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.717e-20 Identity = 52/106 (49.06%), Postives = 65/106 (61.32%), Query Frame = -2 Query: 172 KLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 489 KL R R + L T LLK+GRI+T RA R+ +KMITLAK G LH RRQ L F+ E+ +V LF E+ +Y ERNGGYTRI++ PR GD + IE Sbjct: 6 KLGRVSAHRNLMLRNLVTSLLKNGRIETTDTRAKETRRLAEKMITLAKRGDLHARRQVLSFVTEETVVKNLFDEIAPKYQERNGGYTRIMKLGPRRGDAAEMVIIE 111
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_SYNAS (50S ribosomal protein L17 OS=Syntrophus aciditrophicus (strain SB) GN=rplQ PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.549e-20 Identity = 49/114 (42.98%), Postives = 69/114 (60.53%), Query Frame = -2 Query: 172 MRHGRRVPKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 513 MRHG+ KL R R + + T L++ +KT RA +RK +KMITL K G +H RRQAL + ++ +V +F E+ ERY +R GGYTRII+ R GD+ P++ IE Sbjct: 1 MRHGKTGRKLGRTSSHRTAMLRNMVTSFLRYESVKTTDTRAKELRKLAEKMITLGKRGDVHARRQALAVVRDRAVVTKIFNELAERYRDRPGGYTRIIKAGYREGDSAPISIIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_MAGSA (50S ribosomal protein L17 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=rplQ PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.549e-20 Identity = 53/114 (46.49%), Postives = 68/114 (59.65%), Query Frame = -2 Query: 172 MRHGRRVPKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 513 MRHG KL+R R+ LF L LLKH +IKT +A R V+K+ITL K G LH RRQA F+ + ++V LFA + RY ER GGY R+++ R GD P+A IE Sbjct: 1 MRHGMSGRKLNRDKSARKALFVSLANALLKHEQIKTTLPKAKDARPIVEKLITLGKRGDLHARRQAYAFLRDDKVVAKLFAVIGPRYKERQGGYCRVLKAGFRYGDCAPMAIIE 114 The following BLAST results are available for this feature:
BLAST of CN185735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185735 ID=CN185735; Name=CN185735; organism=Citrus sinensis; type=EST; length=718bpback to top |