CN185721
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185721 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.176e-20 Identity = 51/85 (60.00%), Postives = 61/85 (71.76%), Query Frame = 1 Query: 76 RRTNVFHPFSLDVWDPFHGFL-----SSALTNAPSSAR----ETSQFTNARIDWKDTPHAHVFKADLPRLTKEEVKVDVEEGRIL 303 RR+NVF PFSLD+WDPF GF SS+ + PS R ET+ F ARIDWK+TP AHVFKAD+P L KEEVKV+V++G IL Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGGSSSGSIFPSFPRGASSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNIL 89
BLAST of CN185721 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.760e-20 Identity = 52/89 (58.43%), Postives = 64/89 (71.91%), Query Frame = 1 Query: 46 MSLIPSIFGGRRTN-VFHPFSLDVWDPFH--GFLSSALTNAPSSARETSQFTNARIDWKDTPHAHVFKADLPRLTKEEVKVDVEEGRIL 303 MSLIP IFG RR++ +F PFS+DV+DPF GF S+ ++ E+S F N RIDWK+TP HVFK DLP L KEEVKV+VEE R+L Sbjct: 1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPST-------NSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVL 82
BLAST of CN185721 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.760e-20 Identity = 47/85 (55.29%), Postives = 59/85 (69.41%), Query Frame = 1 Query: 76 RRTNVFHPFSLDVWDPFHGFLSSALTNAPSS---------ARETSQFTNARIDWKDTPHAHVFKADLPRLTKEEVKVDVEEGRIL 303 RR+NVF PFSLD+WDPF GF + + + S + ET+ F ARIDWK+TP AHVFKAD+P L KEEVKV+VE+G +L Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGSRSSGSIFPSFPRGTSSETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVL 89
BLAST of CN185721 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 6.760e-20 Identity = 45/78 (57.69%), Postives = 58/78 (74.36%), Query Frame = 1 Query: 76 RRTNVFHPFSLDVWDPFHGFLSSALTNA--PSSARETSQFTNARIDWKDTPHAHVFKADLPRLTKEEVKVDVEEGRIL 303 RR+NVF PFSLD+WDPF GF + + + P + + + F ARIDWK+TP AHVFKAD+P L KEEVKV+VE+G +L Sbjct: 5 RRSNVFDPFSLDLWDPFDGFPFGSGSGSLFPRANSDAAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVL 82
BLAST of CN185721 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.382e-19 Identity = 45/76 (59.21%), Postives = 57/76 (75.00%), Query Frame = 1 Query: 76 RRTNVFHPFSLDVWDPFHGFLSSALTNAPSSARETSQFTNARIDWKDTPHAHVFKADLPRLTKEEVKVDVEEGRIL 303 RR+NVF PF+ D WDPF G S + +S R+T+ F NAR+DWK+TP +HVFKADLP + KEEVKV+VEEG +L Sbjct: 5 RRSNVFDPFA-DFWDPFDGVFRSLVP--ATSDRDTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVL 77
BLAST of CN185721 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.723e-19 Identity = 49/89 (55.06%), Postives = 59/89 (66.29%), Query Frame = 1 Query: 46 MSLIPSIFGGRR---TNVFHPFSLDVWDPFHGFLSSALTNAPSSARETSQFTNARIDWKDTPHAHVFKADLPRLTKEEVKVDVEEGRIL 303 MSLIPS FG R N+F PFSLDVWDPF PSS+ +S NAR+DWK+T AHVFKADLP + KEEVKV++E+ +L Sbjct: 1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKEL------QFPSSS--SSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVL 81
BLAST of CN185721 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.327e-18 Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 1 Query: 97 PFSLDVWDPFHGF-LSSALTNAPSSARETSQFTNARIDWKDTPHAHVFKADLPRLTKEEVKVDVEEGRIL 303 PFSLDVWDPF F +++ +A S +E S F + RIDWK+TP AHVFKADLP L KEEVKV++E+ R+L Sbjct: 2 PFSLDVWDPFKDFPFTNSALSASSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVL 71
BLAST of CN185721 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.410e-17 Identity = 44/83 (53.01%), Postives = 55/83 (66.27%), Query Frame = 1 Query: 76 RRTNVFHPFSLDVWDPFHGF-------LSSALTNAPSSARETSQFTNARIDWKDTPHAHVFKADLPRLTKEEVKVDVEEGRIL 303 RR N F PFSLD+WDP GF SS+ + P + + + F ARIDWK+TP HVFKAD+P L KEEVKV+V++G IL Sbjct: 5 RRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNIL 87
BLAST of CN185721 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.101e-17 Identity = 45/77 (58.44%), Postives = 55/77 (71.43%), Query Frame = 1 Query: 76 RRTNVFHPFSLDVW-DPFHGFLSSALTNAPSSARETSQFTNARIDWKDTPHAHVFKADLPRLTKEEVKVDVEEGRIL 303 RRTNVF PF+ D+W DPF F S + ET+ F NAR+DWK+TP AHVFKADLP + KEEVKV+VE+G +L Sbjct: 5 RRTNVFDPFA-DLWADPFDTF-RSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVL 79
BLAST of CN185721 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.558e-16 Identity = 44/77 (57.14%), Postives = 56/77 (72.73%), Query Frame = 1 Query: 76 RRTNVFHPFSLDVW-DPFHGFLSSALTNAPSSARETSQFTNARIDWKDTPHAHVFKADLPRLTKEEVKVDVEEGRIL 303 RR+NVF PF+ D+W DPF F S + S+ ET+ F NAR+DWK+TP AHVFK DLP + KEEVKV+VE+G +L Sbjct: 5 RRSNVFDPFA-DLWADPFDTFRSIVPAISGGSS-ETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVL 79 The following BLAST results are available for this feature:
BLAST of CN185721 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185721 ID=CN185721; Name=CN185721; organism=Citrus sinensis; type=EST; length=303bpback to top |