CN185715
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185715 vs. ExPASy Swiss-Prot
Match: RL13_SCHMA (60S ribosomal protein L13 OS=Schistosoma mansoni GN=RPL13 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.268e-24 Identity = 56/119 (47.06%), Postives = 81/119 (68.07%), Query Frame = 2 Query: 2 KYNL*LRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLR 358 +YN+ +R+GRGF+L+E++AAG+ K A TIGI+VDHRR+N S+EGLQ NV RLK YKAKL++FP K +A D+ +E+ ATQ++ P +PIT + K T + A+ +R Sbjct: 64 RYNMKVRSGRGFSLQEVRAAGLNPKFARTIGIAVDHRRRNVSVEGLQRNVARLKAYKAKLILFPLNPAKPQAMDAKADEVKKATQLRRPVLPITQRAKRLKAHKPTSSELRYSAFHAIR 182
BLAST of CN185715 vs. ExPASy Swiss-Prot
Match: RL13_DICDI (60S ribosomal protein L13 OS=Dictyostelium discoideum GN=rpl13 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.518e-21 Identity = 58/133 (43.61%), Postives = 81/133 (60.90%), Query Frame = 2 Query: 2 KYNL*LRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLV--KVTQDMKSFKAYDKLRIERANERHFGAR 394 +YN+ +RAGRGFTLEELKAAG+ + A TIGI+VD RR N++ + L N QRLK Y++KLV+FPR+ K G++ EE+A A Q P+ + T + K T+ K F AY L+ + + G R Sbjct: 63 RYNMKVRAGRGFTLEELKAAGLTAQYARTIGIAVDTRRVNKTQQSLTLNTQRLKNYQSKLVLFPRKVNAPKKGEATKEEVAKAVQTLKPFTVKSAIAVTCEQTPRKPTEAEKKFSAYATLKAADSKAKTVGIR 195
BLAST of CN185715 vs. ExPASy Swiss-Prot
Match: RL13A_YEAST (60S ribosomal protein L13-A OS=Saccharomyces cerevisiae GN=RPL13A PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.052e-18 Identity = 55/131 (41.98%), Postives = 75/131 (57.25%), Query Frame = 2 Query: 2 KYNL*LRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 394 KYN +RAGRGFTL E+KAAG+ A TIGI+VDHRR+NR+ E +NVQRLK Y++K++VFPR + APE A QV + +P D+ A+ LR+ R+ ++ G R Sbjct: 64 KYNRKVRAGRGFTLAEVKAAGLTAAYARTIGIAVDHRRQNRNQEIFDANVQRLKEYQSKIIVFPRNGK-------APE----AEQVLSAAATFPIAQPATDVEARAVQDNGESAFRTLRLARSEKKFRGIR 183
BLAST of CN185715 vs. ExPASy Swiss-Prot
Match: RL13B_YEAST (60S ribosomal protein L13-B OS=Saccharomyces cerevisiae GN=RPL13B PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.500e-18 Identity = 55/131 (41.98%), Postives = 75/131 (57.25%), Query Frame = 2 Query: 2 KYNL*LRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 394 KYN +RAGRGFTL E+KAAG+ A TIGI+VDHRR+NR+ E +NVQRLK Y++K++VFPR + APE A QV + +P D+ A+ LR+ R+ ++ G R Sbjct: 64 KYNRKVRAGRGFTLAEVKAAGLTAAYARTIGIAVDHRRQNRNQEIFDANVQRLKEYQSKIIVFPRDGK-------APE----AEQVLSAAATFPIAQPATDVEARAVQDNGESAFRTLRLARSEKKFRGIR 183
BLAST of CN185715 vs. ExPASy Swiss-Prot
Match: RL13_CANAL (60S ribosomal protein L13 OS=Candida albicans GN=RPL13 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.970e-18 Identity = 53/129 (41.09%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 2 KYNL*LRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITL---EKPTVDLVKVTQDMKSFKAYDKLRIERANER 379 KYN +RAGRGFTL ELKA GI K A TIGISVDHRR+N+S E +NV RL+ YK+KLV+F ++ + + +++ V+ P L E P + + ++ K Y +R +RA E+ Sbjct: 64 KYNRKVRAGRGFTLAELKAVGIAPKYARTIGISVDHRRQNKSQETFDANVARLQEYKSKLVIFDKKTKASEVASFEQVDVSATFPVEQPAPESGLRAVEVPEQTAYRTLRLARNEKKYKGIREKRAKEK 192
BLAST of CN185715 vs. ExPASy Swiss-Prot
Match: RL13_SACEX (60S ribosomal protein L13 OS=Saccharomyces exiguus GN=RPL13 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.268e-17 Identity = 53/131 (40.46%), Postives = 73/131 (55.73%), Query Frame = 2 Query: 2 KYNL*LRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 394 KYN +RAGRGFT E+KAAG+ A TIGI+VDHRR+N++ E + NVQRLK Y++K++VFPR + PE QV + +P V+ AY LR+ R+ +R+ G R Sbjct: 64 KYNRKVRAGRGFTFGEVKAAGLTPAYARTIGIAVDHRRQNKNQEMFELNVQRLKEYQSKIIVFPRNGK-------VPE----TEQVLSTAAAFPIAQPAVETETRAVQDNGESAYRTLRMARSEKRYKGIR 183 The following BLAST results are available for this feature:
BLAST of CN185715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185715 ID=CN185715; Name=CN185715; organism=Citrus sinensis; type=EST; length=637bpback to top |