CN185714
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185714 vs. ExPASy Swiss-Prot
Match: RL13_CHICK (60S ribosomal protein L13 OS=Gallus gallus GN=RPL13 PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 2.890e-33 Identity = 73/131 (55.73%), Postives = 95/131 (72.52%), Query Frame = -1 Query: 239 KYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 631 +Y+ K+RAGRGF+LEELK AGI K+ A TIGISVD RR+N+S E LQ+NVQRLK Y++KL++FPR+ K GDS+PEEL ATQ+ GP MPI ++++ K+FKA+ LR+ RAN R FG R Sbjct: 65 RYHKKVRAGRGFSLEELKLAGINKRFARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSPEELKMATQLSGPVMPIRNVFKREKARVISEEEKNFKAFASLRMARANARLFGIR 195
BLAST of CN185714 vs. ExPASy Swiss-Prot
Match: RL13_MOUSE (60S ribosomal protein L13 OS=Mus musculus GN=Rpl13 PE=2 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 4.930e-33 Identity = 73/131 (55.73%), Postives = 95/131 (72.52%), Query Frame = -1 Query: 239 KYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 631 +Y+ K+RAGRGF+LEEL+ AGI KK+A TIGISVD RR+N+S E LQ+NVQRLK Y++KL++FPR+ K GDS+ EEL ATQ+ GP MPI +T++ K+FKA+ LR+ RAN R FG R Sbjct: 65 RYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPIRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIR 195
BLAST of CN185714 vs. ExPASy Swiss-Prot
Match: RL13_HUMAN (60S ribosomal protein L13 OS=Homo sapiens GN=RPL13 PE=1 SV=4) HSP 1 Score: 140.584 bits (353), Expect = 6.438e-33 Identity = 72/131 (54.96%), Postives = 95/131 (72.52%), Query Frame = -1 Query: 239 KYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 631 +Y+ K+RAGRGF+LEEL+ AGI KK+A TIGISVD RR+N+S E LQ+NVQRLK Y++KL++FPR+ K GDS+ EEL ATQ+ GP MP+ +T++ K+FKA+ LR+ RAN R FG R Sbjct: 65 RYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIR 195
BLAST of CN185714 vs. ExPASy Swiss-Prot
Match: RL13_BOVIN (60S ribosomal protein L13 OS=Bos taurus GN=RPL13 PE=2 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 1.873e-32 Identity = 72/131 (54.96%), Postives = 94/131 (71.76%), Query Frame = -1 Query: 239 KYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 631 +Y+ K+RAGRGF+LEEL+ AGI KK+A TIGISVD RR+N+ E LQ+NVQRLK Y++KL++FPR+ K GDS+ EEL ATQ+ GP MPI +T++ K+FKA+ LR+ RAN R FG R Sbjct: 65 RYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKCTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPIRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIR 195
BLAST of CN185714 vs. ExPASy Swiss-Prot
Match: RL13_DROME (60S ribosomal protein L13 OS=Drosophila melanogaster GN=RpL13 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.173e-32 Identity = 72/132 (54.55%), Postives = 94/132 (71.21%), Query Frame = -1 Query: 239 KYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKP-TVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 631 +Y+ KLRAGRGFTLEELK AGI A TIGI+VD RRKN+SLE Q N+QRLK Y++KL++FP +K +AG+S+ EE ATQ++GP +PI E+P V+ +VT+D K FKA+ LR R + R G R Sbjct: 64 RYHTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRAGESSLEECKLATQLKGPVLPIKNEQPAVVEFREVTKDEKKFKAFATLRKARTDARLVGIR 195
BLAST of CN185714 vs. ExPASy Swiss-Prot
Match: RL13_CRIGR (60S ribosomal protein L13 OS=Cricetulus griseus GN=RPL13 PE=2 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 5.450e-32 Identity = 72/131 (54.96%), Postives = 94/131 (71.76%), Query Frame = -1 Query: 239 KYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 631 +Y+ K+RAGRGF+LEEL+ AGI KK+A TIGISVD RR+N+S E LQ+NVQRLK Y++KL++FPR+ K GDS+ EEL ATQ+ GP M I +T++ K+FKA+ LR+ RAN R FG R Sbjct: 65 RYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMRIRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIR 195
BLAST of CN185714 vs. ExPASy Swiss-Prot
Match: RL13_SCHPO (60S ribosomal protein L13 OS=Schizosaccharomyces pombe GN=rpl13 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.257e-28 Identity = 68/131 (51.91%), Postives = 91/131 (69.47%), Query Frame = -1 Query: 239 KYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 631 +YNMK+RAGRGFTLEELKAAG+ +++A TIGI VDHRR+NRS E LQ NV+R+K Y A L+VFPR+A + K GD+ A T V +PIT ++ + +T++ K+F A+ L ERA R+ GAR Sbjct: 64 RYNMKVRAGRGFTLEELKAAGVSRRVASTIGIPVDHRRRNRSEESLQRNVERIKVYLAHLIVFPRKAGQPKKGDATDVSGAEQTDV-AAVLPIT-QEAVEEAKPITEEAKNFNAFSTLSNERAYARYAGAR 192
BLAST of CN185714 vs. ExPASy Swiss-Prot
Match: RL13_LUMRU (60S ribosomal protein L13 OS=Lumbricus rubellus GN=RPL13 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.775e-28 Identity = 65/131 (49.62%), Postives = 89/131 (67.94%), Query Frame = -1 Query: 239 KYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 631 KYN +LR GRGF+L+ELKAAGI KK A IGISVD RR+N+S+E LQ NVQRLK Y++KL++FP++ K GD+ EE+ ATQ++G +P T +T + + K +D+LR RA++R G R Sbjct: 41 KYNTRLREGRGFSLDELKAAGINKKEARAIGISVDVRRRNKSVESLQLNVQRLKEYRSKLILFPKKLSKPNKGDATEEEMKLATQLKGKLLPRTAWIKPEKARAITDEERKVKVFDRLRQARAHKRLAGKR 171
BLAST of CN185714 vs. ExPASy Swiss-Prot
Match: RL13_SPOFR (60S ribosomal protein L13 OS=Spodoptera frugiperda GN=RpL13 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.620e-26 Identity = 62/131 (47.33%), Postives = 88/131 (67.18%), Query Frame = -1 Query: 239 KYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 631 +Y+ K+RAGRGFTL E++AAG+ A TIGI+VD RR+N+S+E LQ NVQRLK Y+A+L++FP + +K G++ EE ATQ++GP MP+ P +T++ K FKAY LR R+ + G R Sbjct: 64 RYHTKVRAGRGFTLREIRAAGLNPAFARTIGIAVDPRRRNKSVESLQVNVQRLKEYRARLILFP-KGKKVLKGEANEEERKLATQLRGPLMPVQQPAPKSIARAITEEEKDFKAYQYLRGARSIAKLVGIR 193
BLAST of CN185714 vs. ExPASy Swiss-Prot
Match: RL13_CAEEL (60S ribosomal protein L13 OS=Caenorhabditis elegans GN=rpl-13 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.956e-26 Identity = 64/135 (47.41%), Postives = 91/135 (67.41%), Query Frame = -1 Query: 239 KYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMP----ITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 631 +YN K R GRGF+L+ELKAAGI + A TIGI+VD RR N++ EGL++N RLK YKAKL++FP++A K GDS+ EEL A Q++G +P IT ++P +VT + + + LR ERA++++ G R Sbjct: 65 RYNTKTRLGRGFSLQELKAAGISQAQARTIGIAVDVRRTNKTAEGLKANADRLKEYKAKLILFPKKASAPKKGDSSAEELKVAAQLRGDVLPLSHTITFDEPR----QVTDAERKVEIFRLLRKERADKKYRGKR 195 The following BLAST results are available for this feature:
BLAST of CN185714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185714 ID=CN185714; Name=CN185714; organism=Citrus sinensis; type=EST; length=631bpback to top |