CN185714
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185714 vs. ExPASy Swiss-Prot
Match: RL13_SCHMA (60S ribosomal protein L13 OS=Schistosoma mansoni GN=RPL13 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.698e-25 Identity = 58/119 (48.74%), Postives = 82/119 (68.91%), Query Frame = -1 Query: 275 KYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLR 631 +YNMK+R+GRGF+L+E++AAG+ K A TIGI+VDHRR+N S+EGLQ NV RLK YKAKL++FP K +A D+ +E+ ATQ++ P +PIT + K T + A+ +R Sbjct: 64 RYNMKVRSGRGFSLQEVRAAGLNPKFARTIGIAVDHRRRNVSVEGLQRNVARLKAYKAKLILFPLNPAKPQAMDAKADEVKKATQLRRPVLPITQRAKRLKAHKPTSSELRYSAFHAIR 182
BLAST of CN185714 vs. ExPASy Swiss-Prot
Match: RL13_DICDI (60S ribosomal protein L13 OS=Dictyostelium discoideum GN=rpl13 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.040e-23 Identity = 60/133 (45.11%), Postives = 82/133 (61.65%), Query Frame = -1 Query: 239 KYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLV--KVTQDMKSFKAYDKLRIERANERHFGAR 631 +YNMK+RAGRGFTLEELKAAG+ + A TIGI+VD RR N++ + L N QRLK Y++KLV+FPR+ K G++ EE+A A Q P+ + T + K T+ K F AY L+ + + G R Sbjct: 63 RYNMKVRAGRGFTLEELKAAGLTAQYARTIGIAVDTRRVNKTQQSLTLNTQRLKNYQSKLVLFPRKVNAPKKGEATKEEVAKAVQTLKPFTVKSAIAVTCEQTPRKPTEAEKKFSAYATLKAADSKAKTVGIR 195
BLAST of CN185714 vs. ExPASy Swiss-Prot
Match: RL13A_YEAST (60S ribosomal protein L13-A OS=Saccharomyces cerevisiae GN=RPL13A PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.392e-19 Identity = 56/131 (42.75%), Postives = 76/131 (58.02%), Query Frame = -1 Query: 239 KYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 631 KYN K+RAGRGFTL E+KAAG+ A TIGI+VDHRR+NR+ E +NVQRLK Y++K++VFPR + APE A QV + +P D+ A+ LR+ R+ ++ G R Sbjct: 64 KYNRKVRAGRGFTLAEVKAAGLTAAYARTIGIAVDHRRQNRNQEIFDANVQRLKEYQSKIIVFPRNGK-------APE----AEQVLSAAATFPIAQPATDVEARAVQDNGESAFRTLRLARSEKKFRGIR 183
BLAST of CN185714 vs. ExPASy Swiss-Prot
Match: RL13B_YEAST (60S ribosomal protein L13-B OS=Saccharomyces cerevisiae GN=RPL13B PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.375e-19 Identity = 56/131 (42.75%), Postives = 76/131 (58.02%), Query Frame = -1 Query: 239 KYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 631 KYN K+RAGRGFTL E+KAAG+ A TIGI+VDHRR+NR+ E +NVQRLK Y++K++VFPR + APE A QV + +P D+ A+ LR+ R+ ++ G R Sbjct: 64 KYNRKVRAGRGFTLAEVKAAGLTAAYARTIGIAVDHRRQNRNQEIFDANVQRLKEYQSKIIVFPRDGK-------APE----AEQVLSAAATFPIAQPATDVEARAVQDNGESAFRTLRLARSEKKFRGIR 183
BLAST of CN185714 vs. ExPASy Swiss-Prot
Match: RL13_CANAL (60S ribosomal protein L13 OS=Candida albicans GN=RPL13 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.051e-19 Identity = 54/129 (41.86%), Postives = 76/129 (58.91%), Query Frame = -1 Query: 254 KYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITL---EKPTVDLVKVTQDMKSFKAYDKLRIERANER 631 KYN K+RAGRGFTL ELKA GI K A TIGISVDHRR+N+S E +NV RL+ YK+KLV+F ++ + + +++ V+ P L E P + + ++ K Y +R +RA E+ Sbjct: 64 KYNRKVRAGRGFTLAELKAVGIAPKYARTIGISVDHRRQNKSQETFDANVARLQEYKSKLVIFDKKTKASEVASFEQVDVSATFPVEQPAPESGLRAVEVPEQTAYRTLRLARNEKKYKGIREKRAKEK 192
BLAST of CN185714 vs. ExPASy Swiss-Prot
Match: RL13_SACEX (60S ribosomal protein L13 OS=Saccharomyces exiguus GN=RPL13 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.540e-18 Identity = 54/131 (41.22%), Postives = 74/131 (56.49%), Query Frame = -1 Query: 239 KYNMKLRAGRGFTLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 631 KYN K+RAGRGFT E+KAAG+ A TIGI+VDHRR+N++ E + NVQRLK Y++K++VFPR + PE QV + +P V+ AY LR+ R+ +R+ G R Sbjct: 64 KYNRKVRAGRGFTFGEVKAAGLTPAYARTIGIAVDHRRQNKNQEMFELNVQRLKEYQSKIIVFPRNGK-------VPE----TEQVLSTAAAFPIAQPAVETETRAVQDNGESAYRTLRMARSEKRYKGIR 183 The following BLAST results are available for this feature:
BLAST of CN185714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185714 ID=CN185714; Name=CN185714; organism=Citrus sinensis; type=EST; length=631bpback to top |