CN185699

Overview
NameCN185699
Unique NameCN185699
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.513e-13
Identity = 34/78 (43.59%), Postives = 54/78 (69.23%), Query Frame = -2
Query:  503 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIE 736
            D++DPA+LRPGR D+L+++P+P  E+R +I K    K  +++D+D + LAK T+G SGAD+  I   A  +A+R + E
Sbjct:  309 DVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKE 386          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.513e-13
Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = -2
Query:  512 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 736
            DI+D ALLRPGR D++I IPLPD E R  I K   R   +S+DVDL  +A+ T+G +GA++  IC  A  +AIR+
Sbjct:  303 DILDAALLRPGRFDRIIEIPLPDTEGRYSILKVHTRCMNLSEDVDLMEVARLTEGRNGAELNAICMEAGMFAIRK 377          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.513e-13
Identity = 43/84 (51.19%), Postives = 53/84 (63.10%), Query Frame = -2
Query:  485 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERE 736
            DI+D ALLRPGR D++I IPLPDEE RL I K   R   + + V+L  +A  T+G +GAD+  IC  A  YAIR N    I RE
Sbjct:  328 DILDKALLRPGRFDRIIEIPLPDEEGRLSILKVHTRTLTMEETVNLPEIAGLTEGKNGADLRAICMEAGMYAIR-NERPAITRE 410          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.977e-13
Identity = 36/75 (48.00%), Postives = 51/75 (68.00%), Query Frame = -2
Query:  512 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 736
            DI+DPALLRPGR D+ I +PLP+E+ R +I K       ++++VD+  LA+ T G SGAD+  IC  A  +AIR+
Sbjct:  301 DILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRD 375          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.977e-13
Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = -2
Query:  515 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSK--DVDLRALAKYTQGFSGADITEICQRACKYAIR 736
            D++DPALLRPGRLD+ I IPLP+E+SR++I K  +  S ++K  ++D  A+ K  +GF+GAD+  IC  A  +AIR
Sbjct:  289 DVLDPALLRPGRLDRKIEIPLPNEQSRMEILK--IHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIR 362          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.582e-13
Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = -2
Query:  500 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEK 736
            DI+DPALLRPGR D+ I+IP PD   R +I K   R   ++KDVDL  +A+ T GF+GAD+  +   A   A R+  E+
Sbjct:  305 DILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAALLAARKGKEE 383          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.372e-13
Identity = 40/78 (51.28%), Postives = 55/78 (70.51%), Query Frame = -2
Query:  503 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIE 736
            DI+DPALLRPGR D+LI +PLP+ +SRL+I K   ++  + K VDLR +A+ T+G SGAD+  I   A  +AIR+  E
Sbjct:  289 DILDPALLRPGRFDRLIEVPLPNFKSRLEILKIHTKRMNL-KGVDLRIIAEMTEGASGADLKAITMEAGMFAIRDRRE 365          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.372e-13
Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = -2
Query:  515 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIR 736
            D++DPALLRPGRLD+ I IPLP+E+SR+ I K          ++D  A+ K  +GF+GAD+  IC  A  +AIR
Sbjct:  289 DVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIR 362          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.372e-13
Identity = 36/75 (48.00%), Postives = 52/75 (69.33%), Query Frame = -2
Query:  512 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 736
            DI+DPALLRPGR+D+ I  P P+EE+RL I K   RK  +++ ++LR +A+   G SGA++  +C  A  YA+RE
Sbjct:  295 DILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 369          
BLAST of CN185699 vs. ExPASy Swiss-Prot
Match: PRS8_DROME (26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Pros45 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.372e-13
Identity = 36/75 (48.00%), Postives = 52/75 (69.33%), Query Frame = -2
Query:  512 DIIDPALLRPGRLDQLIYIPLPDEESRLQIFKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRE 736
            DI+DPALLRPGR+D+ I  P P+EE+RL I K   RK  +++ ++LR +A+   G SGA++  +C  A  YA+RE
Sbjct:  298 DILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 372          
The following BLAST results are available for this feature:
BLAST of CN185699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
PSMR_METMA1.513e-1343.59Proteasome-activating nucleotidase OS=Methanosarci... [more]
PSMR_METHJ1.513e-1350.67Proteasome-activating nucleotidase OS=Methanospiri... [more]
PSMR_METB61.513e-1351.19Proteasome-activating nucleotidase OS=Methanoregul... [more]
PSMR_METTH1.977e-1348.00Proteasome-activating nucleotidase OS=Methanobacte... [more]
PS10B_ARATH1.977e-1350.0026S protease regulatory subunit S10B homolog B OS=... [more]
FTSH_AQUAE2.582e-1346.84Cell division protease ftsH homolog OS=Aquifex aeo... [more]
PSMR_THEON3.372e-1351.28Proteasome-activating nucleotidase OS=Thermococcus... [more]
PS10A_ARATH3.372e-1348.6526S protease regulatory subunit 10B homolog A OS=A... [more]
PRS8_MANSE3.372e-1348.0026S protease regulatory subunit 8 OS=Manduca sexta... [more]
PRS8_DROME3.372e-1348.0026S protease regulatory subunit 8 OS=Drosophila me... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001L22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185699 ID=CN185699; Name=CN185699; organism=Citrus sinensis; type=EST; length=737bp
ATCTTGCAGAGTTTCATTTCATCCATTATAATCAAAATAGACCATTGCGT
TCCAGCAGCCTAAACTCATTTAACCTTTTCGGCTTTATGGCAGAAACATT
GAAGCTTTTGACAAATCATATGGCGAATCGTCAAATACATATGTAAACCA
ACATCAGCATAAATTAGACAGCAAACTGATAGACTTTAAACGGGGGGAGG
ATCTAACTGTAAAGATCATCGTCATCTGCGCCACCTGCAGAAGACGCAAA
AGGATCTGATCCGCCATCAGCACCAGGGGGAGCAGCATCAGGAAACCTAA
ATTCACTTCCAAACCCTCTTGACTGCTGCAATGTTTGAGCAAATGCTTGG
TATTTGCGTATGTCAGCATCACTGACACTTCTACGAGCATACTTCATTGA
TTCCGCGGAGGGCACAGCTTTAATCTCAGCCACTTCATCCTCTACATCCT
CCTCCATTGCCTCTGGGTTCTCACTTCTCCTCCTCTCCCTCTCAATATCT
TTCTCGATATTCTCTCGGATGGCATATTTGCAAGCCCGCTGGCATATTTC
AGTAATATCTGCACCACTAAAGCCTTGGGTGTACTTAGCAAGAGCTCTGA
GGTCAACATCTTTGGACACCGGTGATTTCCTCAAGCAAGCCTTGAAAATT
TGAAGGCGAGATTCCTCATCAGGGAGAGGGATATAAATCAACTGGTCAAG
ACGGCCTGGACGGAGAAGGGCAGGATCTATGATATCT
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