CN185629
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185629 vs. ExPASy Swiss-Prot
Match: RS4C_SCHPO (40S ribosomal protein S4-C OS=Schizosaccharomyces pombe GN=rps4c PE=1 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.615e-55 Identity = 105/157 (66.88%), Postives = 122/157 (77.71%), Query Frame = -3 Query: 272 FRLL*DTKGGFGLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 742 FRL+ D KG F +H + EEAK+KLCKV+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LE NKI FIKFD VMVTGGRN GRVG I +RE H GSFE IH++DAL EFATRL NVF IG+ K W+SLPKGKG+KLSI EE +R Sbjct: 99 FRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRR 255
BLAST of CN185629 vs. ExPASy Swiss-Prot
Match: RS4A_SCHPO (40S ribosomal protein S4-A OS=Schizosaccharomyces pombe GN=rps4a PE=2 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 3.615e-55 Identity = 105/157 (66.88%), Postives = 122/157 (77.71%), Query Frame = -3 Query: 272 FRLL*DTKGGFGLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 742 FRL+ D KG F +H + EEAK+KLCKV+ VQ G KG+P++ T+DGRTIRYPDPLIK NDTIKL+LE NKI FIKFD VMVTGGRN GRVG I +RE H GSFE IH++DAL EFATRL NVF IG+ K W+SLPKGKG+KLSI EE +R Sbjct: 99 FRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRR 255
BLAST of CN185629 vs. ExPASy Swiss-Prot
Match: RS4Y2_PANTR (40S ribosomal protein S4, Y isoform 2 OS=Pan troglodytes GN=RPS4Y2 PE=2 SV=3) HSP 1 Score: 213.386 bits (542), Expect = 1.052e-54 Identity = 96/157 (61.15%), Postives = 123/157 (78.34%), Query Frame = -3 Query: 272 FRLL*DTKGGFGLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 742 FRL+ DTKG F +H + EEAK+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL KIT FIKFD GN+ MV GG N GRVG++ NRE+H GS + +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE KR Sbjct: 99 FRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIGGANLGRVGVVTNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKR 255
BLAST of CN185629 vs. ExPASy Swiss-Prot
Match: RS4Y1_HUMAN (40S ribosomal protein S4, Y isoform 1 OS=Homo sapiens GN=RPS4Y1 PE=2 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 1.052e-54 Identity = 96/157 (61.15%), Postives = 124/157 (78.98%), Query Frame = -3 Query: 272 FRLL*DTKGGFGLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 742 FRL+ DTKG F +H + EEAK+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++ EE KR Sbjct: 99 FRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEERDKR 255
BLAST of CN185629 vs. ExPASy Swiss-Prot
Match: RS4Y1_GORGO (40S ribosomal protein S4, Y isoform 1 OS=Gorilla gorilla gorilla GN=RPS4Y1 PE=3 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 1.794e-54 Identity = 95/157 (60.51%), Postives = 124/157 (78.98%), Query Frame = -3 Query: 272 FRLL*DTKGGFGLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 742 FRL+ DTKG F +H + EEAK+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L++ EE KR Sbjct: 99 FRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTVAEERDKR 255
BLAST of CN185629 vs. ExPASy Swiss-Prot
Match: RS4Y1_PONPY (40S ribosomal protein S4, Y isoform 1 OS=Pongo pygmaeus GN=RPS4Y1 PE=3 SV=2) HSP 1 Score: 212.231 bits (539), Expect = 2.343e-54 Identity = 96/157 (61.15%), Postives = 123/157 (78.34%), Query Frame = -3 Query: 272 FRLL*DTKGGFGLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 742 FRL+ DTKG F + + EEAK+KLCKVR + G KGIP++ T+D RTIRYPDPLIK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATR+ N+F IG G+KPW+SLP+GKGI+L+I EE KR Sbjct: 99 FRLVYDTKGRFAVQRITVEEAKYKLCKVRKITVGMKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKR 255
BLAST of CN185629 vs. ExPASy Swiss-Prot
Match: RS4_YARLI (40S ribosomal protein S4 OS=Yarrowia lipolytica GN=RPS4 PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 5.220e-54 Identity = 101/157 (64.33%), Postives = 124/157 (78.98%), Query Frame = -3 Query: 272 FRLL*DTKGGFGLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 742 FRL+ D KG F +H + DEEA +KL KV+ VQ G+KGIPY+ T+DGRTIRYPDPLIK NDT+K+DL KIT F+KF+ GNIVM TGGRN GRVG I +RE+H+G F+ +HI+DAL ++F TRL NVF IG+G+K +SLPKGKGIKLSI EE R Sbjct: 99 FRLVYDVKGRFAVHRITDEEAAYKLGKVKRVQVGKKGIPYLVTHDGRTIRYPDPLIKVNDTVKIDLATGKITSFVKFENGNIVMTTGGRNMGRVGTITHRERHEGGFDIVHIKDALDNQFVTRLTNVFVIGEGNKSLISLPKGKGIKLSIAEERDAR 255
BLAST of CN185629 vs. ExPASy Swiss-Prot
Match: RS4Y1_PANTR (40S ribosomal protein S4, Y isoform 1 OS=Pan troglodytes GN=RPS4Y1 PE=2 SV=2) HSP 1 Score: 211.075 bits (536), Expect = 5.220e-54 Identity = 95/157 (60.51%), Postives = 123/157 (78.34%), Query Frame = -3 Query: 272 FRLL*DTKGGFGLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 742 FRL+ DTKG F +H + EEAK+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++ E KR Sbjct: 99 FRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDKR 255
BLAST of CN185629 vs. ExPASy Swiss-Prot
Match: RS4Y1_PANPA (40S ribosomal protein S4, Y isoform 1 OS=Pan paniscus GN=RPS4Y1 PE=3 SV=2) HSP 1 Score: 211.075 bits (536), Expect = 5.220e-54 Identity = 95/157 (60.51%), Postives = 123/157 (78.34%), Query Frame = -3 Query: 272 FRLL*DTKGGFGLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 742 FRL+ DTKG F +H + EEAK+KLCKVR + G KGIP++ T+D RTIRYPDP+IK NDT+++DL KI +FIKFD GN+ MV GG N GRVG+I NRE+H GSF+ +H++DA G+ FATRL N+F IG G+KPW+SLP+GKGI+L++ E KR Sbjct: 99 FRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDKR 255
BLAST of CN185629 vs. ExPASy Swiss-Prot
Match: RS4_BOMMO (40S ribosomal protein S4 OS=Bombyx mori GN=RpS4 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 6.818e-54 Identity = 98/157 (62.42%), Postives = 124/157 (78.98%), Query Frame = -3 Query: 272 FRLL*DTKGGFGLHSLRDEEAKFKLCKVRSVQFGQKGIPYINTYDGRTIRYPDPLIKANDTIKLDLEENKITDFIKFDVGNIVMVTGGRNRGRVGIIKNREKHKGSFETIHIQDALGHEFATRLGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKR 742 FRL+ D KG F +H + EEAK+KLCKV+ V G K +PY+ T+DGRTIRYPDPLIK ND+I+LD+ KI DFIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +HI+D+ GH FATRL NVF IGKG+K ++SLP+GKGI+L+I EE KR Sbjct: 99 FRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKR 255 The following BLAST results are available for this feature:
BLAST of CN185629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185629 ID=CN185629; Name=CN185629; organism=Citrus sinensis; type=EST; length=744bpback to top |