CN185621

Overview
NameCN185621
Unique NameCN185621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: KIN11_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN11 OS=Arabidopsis thaliana GN=KIN11 PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.856e-57
Identity = 111/212 (52.36%), Postives = 144/212 (67.92%), Query Frame = 1
Query:  142 ALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            ++   Y+LGK LG G+F KV  A  V+ G  VA+K++N+ KI +  +   ++REI I+R   HPHI++ YEV+ T S IY VME+VK GELF  I  KGR  ED +R +FQQ+IS V YCH   V HRDLKPENLLLD   N+K++DFGLS V   +R    L T CG+P Y APE++S K Y G +VD+WSCGVIL+ L  G LPF+D N+
Sbjct:   15 SILPNYKLGKTLGIGSFGKVKIAEHVVTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRQYEVIETTSDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSRCNIKIADFGLSNV---MRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENI 223          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: KIN10_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana GN=KIN10 PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 3.501e-56
Identity = 107/212 (50.47%), Postives = 143/212 (67.45%), Query Frame = 1
Query:  142 ALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            ++   Y+LG+ LG G+F +V  A   L G  VA+K++N+ KI +  +   ++REI I+R   HPHI++LYEV+ T + IY VME+V  GELF  I  KGR  ED +R +FQQ+IS V YCH   V HRDLKPENLLLD   N+K++DFGLS +   +R    L T CG+P Y APE++S K Y G +VD+WSCGVIL+ L  G LPF+D N+
Sbjct:   37 SILPNYKLGRTLGIGSFGRVKIAEHALTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYLVMEYVNSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKCNVKIADFGLSNI---MRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENI 245          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: AAPK2_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Pongo abelii GN=PRKAA2 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.245e-53
Identity = 108/210 (51.43%), Postives = 141/210 (67.14%), Query Frame = 1
Query:  151 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            G Y LG  LG G F KV      L G  VAVK++N+ KI S ++V  IKREI  ++   HPHI+KLY+V++T +  + VME+V GGELF  I K GR  E  +R+ FQQ++SAV YCH   V HRDLKPEN+LLD + N K++DFGLS     I +DG  L T CG+P Y APE++S + Y G +VD+WSCGVIL+ L  G LPF+D ++
Sbjct:   14 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NIMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 219          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: AAPK2_HUMAN (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Homo sapiens GN=PRKAA2 PE=1 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 2.774e-53
Identity = 107/210 (50.95%), Postives = 141/210 (67.14%), Query Frame = 1
Query:  151 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            G Y LG  LG G F KV      L G  VAVK++N+ KI S ++V  IKREI  ++   HPHI+KLY+V++T +  + VME+V GGELF  I K GR  E  +R+ FQQ++SAV YCH   V HRDLKPEN+LLD + N K++DFGLS     + +DG  L T CG+P Y APE++S + Y G +VD+WSCGVIL+ L  G LPF+D ++
Sbjct:   14 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 219          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: AAPK2_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Rattus norvegicus GN=Prkaa2 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.623e-53
Identity = 107/210 (50.95%), Postives = 140/210 (66.67%), Query Frame = 1
Query:  151 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            G Y LG  LG G F KV      L G  VAVK++N+ KI S ++V  IKREI  ++   HPHI+KLY+V++T +  + VME+V GGELF  I K GR  E  +R+ FQQ++SAV YCH   V HRDLKPEN+LLD   N K++DFGLS     + +DG  L T CG+P Y APE++S + Y G +VD+WSCGVIL+ L  G LPF+D ++
Sbjct:   14 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 219          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: AAPK2_PIG (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Sus scrofa GN=PRKAA2 PE=2 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 3.623e-53
Identity = 107/210 (50.95%), Postives = 140/210 (66.67%), Query Frame = 1
Query:  151 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            G Y LG  LG G F KV      L G  VAVK++N+ KI S ++V  IKREI  ++   HPHI+KLY+V++T +  + VME+V GGELF  I K GR  E  +R+ FQQ++SAV YCH   V HRDLKPEN+LLD   N K++DFGLS     + +DG  L T CG+P Y APE++S + Y G +VD+WSCGVIL+ L  G LPF+D ++
Sbjct:   14 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 219          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: AAPK2_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Mus musculus GN=Prkaa2 PE=1 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 3.623e-53
Identity = 107/210 (50.95%), Postives = 140/210 (66.67%), Query Frame = 1
Query:  151 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            G Y LG  LG G F KV      L G  VAVK++N+ KI S ++V  IKREI  ++   HPHI+KLY+V++T +  + VME+V GGELF  I K GR  E  +R+ FQQ++SAV YCH   V HRDLKPEN+LLD   N K++DFGLS     + +DG  L T CG+P Y APE++S + Y G +VD+WSCGVIL+ L  G LPF+D ++
Sbjct:   14 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 219          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: AAPK1_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Rattus norvegicus GN=Prkaa1 PE=1 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 6.180e-53
Identity = 107/210 (50.95%), Postives = 141/210 (67.14%), Query Frame = 1
Query:  151 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            G Y LG  LG G F KV   +  L G  VAVK++N+ KI S ++V  I+REI  ++   HPHI+KLY+V++T S I+ VME+V GGELF  I K GR  E  SR+ FQQ++S V YCH   V HRDLKPEN+LLD + N K++DFGLS     + +DG  L T CG+P Y APE++S + Y G +VD+WS GVIL+ L  G LPF+D ++
Sbjct:   25 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV 230          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: AAPK1_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragment) OS=Pongo abelii GN=PRKAA1 PE=2 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 6.180e-53
Identity = 107/210 (50.95%), Postives = 141/210 (67.14%), Query Frame = 1
Query:  151 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            G Y LG  LG G F KV   +  L G  VAVK++N+ KI S ++V  I+REI  ++   HPHI+KLY+V++T S I+ VME+V GGELF  I K GR  E  SR+ FQQ++S V YCH   V HRDLKPEN+LLD + N K++DFGLS     + +DG  L T CG+P Y APE++S + Y G +VD+WS GVIL+ L  G LPF+D ++
Sbjct:   20 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV 225          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: AAPK1_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Mus musculus GN=Prkaa1 PE=1 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 6.180e-53
Identity = 107/210 (50.95%), Postives = 141/210 (67.14%), Query Frame = 1
Query:  151 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            G Y LG  LG G F KV   +  L G  VAVK++N+ KI S ++V  I+REI  ++   HPHI+KLY+V++T S I+ VME+V GGELF  I K GR  E  SR+ FQQ++S V YCH   V HRDLKPEN+LLD + N K++DFGLS     + +DG  L T CG+P Y APE++S + Y G +VD+WS GVIL+ L  G LPF+D ++
Sbjct:   25 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV 230          
The following BLAST results are available for this feature:
BLAST of CN185621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KIN11_ARATH1.856e-5752.36SNF1-related protein kinase catalytic subunit alph... [more]
KIN10_ARATH3.501e-5650.47SNF1-related protein kinase catalytic subunit alph... [more]
AAPK2_PONAB1.245e-5351.435'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_HUMAN2.774e-5350.955'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_RAT3.623e-5350.955'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_PIG3.623e-5350.955'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_MOUSE3.623e-5350.955'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_RAT6.180e-5350.955'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_PONAB6.180e-5350.955'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_MOUSE6.180e-5350.955'-AMP-activated protein kinase catalytic subunit ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0001J23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185621 ID=CN185621; Name=CN185621; organism=Citrus sinensis; type=EST; length=776bp
GAGGCAGCGGCTTTGATTCAGTGGTTTCATTTTTATTCTTCGTTAGCTTT
GTCATCTTCATCGCCTCAGGTTCGATCTCTGGTTATGTCAGAGATCGAAC
GACACAATGTTTCAGAAAATCCTCGCGCCCAGGCCGCCAATGCCTTGTTC
GGGAAGTACGAGCTGGGCAAGCTCCTGGGCTGCGGGGCCTTTGCTAAAGT
CTATCACGCGCGCGACGTCCTCAACGGACGCAGCGTCGCAGTCAAAGTGA
TTAACAAGAACAAGATCATGTCCTCCAATTTAGTCTCCAACATCAAGCGA
GAAATCTCCATCATGCGCCGTTTGAACCACCCTCACATCGTCAAGCTCTA
CGAGGTCTTAGCCACCAAGTCCAAGATTTACTGCGTCATGGAGTTCGTCA
AAGGCGGCGAGCTCTTCGCGAAGATCGCCAAAGGCCGGTTCAGCGAAGAC
CTTAGCCGCAAGTACTTCCAGCAACTCATATCCGCCGTCGGATATTGCCA
CTCGCGCGGAGTCTTCCACCGCGACTTGAAGCCGGAGAACCTTTTGCTGG
ACGAGAACGGGAATTTAAAAGTCTCGGATTTCGGACTCAGCGCCGTGAAG
GATCAGATTCGTACGGACGGGCTGTTGCACACGCTTTGTGGGACCCCTGC
TTACGTGGCACCGGAGATTTTGTCTAAGAAGGGATACGATGGAGCTAAGG
TCGACTTGTGGTCATGCGGCGTCATTTTGTTCGTATTGACGGCAGGTTAC
CTGCCGTTTAACGATCCGAATTTGAT
back to top