CN185621

Overview
NameCN185621
Unique NameCN185621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: MARK2_MOUSE (Serine/threonine-protein kinase MARK2 OS=Mus musculus GN=Mark2 PE=1 SV=3)

HSP 1 Score: 198.749 bits (504), Expect = 2.871e-50
Identity = 103/209 (49.28%), Postives = 141/209 (67.46%), Query Frame = 1
Query:  151 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            G Y L K +G G FAKV  AR +L G+ VAVK+I+K ++ SS+L   + RE+ IM+ LNHP+IVKL+EV+ T+  +Y VME+  GGE+F   +A GR  E  +R  F+Q++SAV YCH + + HRDLK ENLLLD + N+K++DFG S   ++      L T CG+P Y APE+   K  DG +VD+WS GVIL+ L +G LPF+  NL
Sbjct:   51 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL-QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPELFQGKKIDGPEVDVWSLGVILYTLVSGSLPFDGQNL 255          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: BRSK1_HUMAN (BR serine/threonine-protein kinase 1 OS=Homo sapiens GN=BRSK1 PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.871e-50
Identity = 94/209 (44.98%), Postives = 142/209 (67.94%), Query Frame = 1
Query:  151 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            G Y L K LG G    V      + G+ VA+K++N+ K+ S +++  ++REI+I++ + HPH++KL++V   K  +Y V+E V GGELF  + K GR +   +RK+F+Q++SA+ +CHS  + HRDLKPENLLLDE  N++++DFG+++++     D LL T CG+P Y  PE++  + YDG + D+WSCGVILF L  G LPF+D NL
Sbjct:   48 GPYRLEKTLGKGQTGLVKLGVHCITGQKVAIKIVNREKL-SESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIVSALDFCHSYSICHRDLKPENLLLDEKNNIRIADFGMASLQ---VGDSLLETSCGSPHYACPEVIKGEKYDGRRADMWSCGVILFALLVGALPFDDDNL 252          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: BRSK2_MOUSE (BR serine/threonine-protein kinase 2 OS=Mus musculus GN=Brsk2 PE=1 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 1.425e-49
Identity = 95/209 (45.45%), Postives = 141/209 (67.46%), Query Frame = 1
Query:  151 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            G Y L K LG G    V      +  + VA+K++N+ K+ S +++  ++REI+I++ + HPH++KL++V   K  +Y V+E V GGELF  + K GR +   +RK+F+Q+ISA+ +CHS  + HRDLKPENLLLDE  N++++DFG+++++     D LL T CG+P Y  PE++  + YDG K D+WSCGVILF L  G LPF+D NL
Sbjct:   18 GPYRLEKTLGKGQTGLVKLGIHCVTCQKVAIKIVNREKL-SESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKPENLLLDERNNIRIADFGMASLQ---VGDSLLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILFALLVGALPFDDDNL 222          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: BRSK2_HUMAN (BR serine/threonine-protein kinase 2 OS=Homo sapiens GN=BRSK2 PE=1 SV=3)

HSP 1 Score: 196.438 bits (498), Expect = 1.425e-49
Identity = 95/209 (45.45%), Postives = 141/209 (67.46%), Query Frame = 1
Query:  151 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            G Y L K LG G    V      +  + VA+K++N+ K+ S +++  ++REI+I++ + HPH++KL++V   K  +Y V+E V GGELF  + K GR +   +RK+F+Q+ISA+ +CHS  + HRDLKPENLLLDE  N++++DFG+++++     D LL T CG+P Y  PE++  + YDG K D+WSCGVILF L  G LPF+D NL
Sbjct:   17 GPYRLEKTLGKGQTGLVKLGVHCVTCQKVAIKIVNREKL-SESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIISALDFCHSHSICHRDLKPENLLLDEKNNIRIADFGMASLQ---VGDSLLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILFALLVGALPFDDDNL 221          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: SIK2_CHICK (Serine/threonine-protein kinase SIK2 OS=Gallus gallus GN=SIK2 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.430e-49
Identity = 103/217 (47.47%), Postives = 139/217 (64.06%), Query Frame = 1
Query:  127 AQAANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            AQ      G Y++ + LG G FA V  AR  +    VA+K+I+K ++  SNL   I RE+ IM+ LNHPHI+KLY+V+ TK  +Y V EF K GE+F  + + G  SE  +RK F Q++SAV YCHS  + HRDLK ENLLLD N N+K++DFG     +  ++   L T CG+P Y APE+   K Y+G  +D+WS GV+L+VL  G LPF+ PNL
Sbjct:   16 AQPRPLRVGFYDIERTLGKGNFAVVKLARHRVTKTQVAIKIIDKTRLDPSNL-EKIYREVQIMKLLNHPHIIKLYQVMETKDMLYIVTEFAKNGEMFDHLTSNGHLSESEARKKFWQILSAVEYCHSHHIVHRDLKTENLLLDANMNIKLADFGFG---NFYKSGEPLSTWCGSPPYAAPEVFEGKEYEGPHLDIWSLGVVLYVLVCGSLPFDGPNL 228          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: SNF1_SCHPO (SNF1-like protein kinase ssp2 OS=Schizosaccharomyces pombe GN=ssp2 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.206e-48
Identity = 102/213 (47.89%), Postives = 143/213 (67.14%), Query Frame = 1
Query:  151 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFND---PNL 774
            G Y + + LG G+F KV  A      + VA+K I++  +  S++   ++REIS ++ L HPHI+KLY+V+ T + I  V+E+  GGELF  I  K R +ED  R++FQQ+I A+ YCH   + HRDLKPENLLLD+N N+K++DFGLS     I TDG  L T CG+P Y APE+++ K Y G +VD+WSCG++L+V+  G LPF+D   PNL
Sbjct:   32 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS----NIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL 239          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: SIK2_MOUSE (Serine/threonine-protein kinase SIK2 OS=Mus musculus GN=Sik2 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.206e-48
Identity = 102/224 (45.54%), Postives = 144/224 (64.29%), Query Frame = 1
Query:  109 VSENPR-AQAANALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            +++ PR  Q      G Y++   LG G FA V   R       VA+K+I+K+++ + NL   I RE+ IM+ L+HPHI+KLY+V+ TKS +Y V E+ K GE+F  +A  GR +E  +R+ F Q++SAV YCH R V HRDLK ENLLLD N N+K++DFG     +  +T  LL T CG+P Y APE+   + Y+G ++D+WS GV+L+VL  G LPF+ P L
Sbjct:    3 MADGPRHLQRGPVRVGFYDIEGTLGKGNFAVVKLGRHRTTKTEVAIKIIDKSQLDAVNL-EKIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARRKFWQILSAVDYCHGRKVVHRDLKAENLLLDNNMNIKIADFGFG---NFFKTGELLATWCGSPPYAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTL 222          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: SIK1_HUMAN (Serine/threonine-protein kinase SIK1 OS=Homo sapiens GN=SIK1 PE=1 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.206e-48
Identity = 99/209 (47.37%), Postives = 139/209 (66.51%), Query Frame = 1
Query:  151 GKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            G Y++ + LG G FA V  AR  +    VA+K+I+K ++ SSNL   I RE+ +M+ LNHPHI+KLY+V+ TK  +Y V EF K GE+F  + + G  SE+ +RK F Q++SAV YCH   + HRDLK ENLLLD N ++K++DFG     +  ++   L T CG+P Y APE+   K Y+G ++D+WS GV+L+VL  G LPF+ PNL
Sbjct:   25 GFYDIERTLGKGNFAVVKLARHRVTKTQVAIKIIDKTRLDSSNL-EKIYREVQLMKLLNHPHIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSNGHLSENEARKKFWQILSAVEYCHDHHIVHRDLKTENLLLDGNMDIKLADFGFG---NFYKSGEPLSTWCGSPPYAAPEVFEGKEYEGPQLDIWSLGVVLYVLVCGSLPFDGPNL 229          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: MELK_MOUSE (Maternal embryonic leucine zipper kinase OS=Mus musculus GN=Melk PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.206e-48
Identity = 102/207 (49.28%), Postives = 140/207 (67.63%), Query Frame = 1
Query:  157 YELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            YEL + +G G FAKV  A  VL G  VA+K+++KN + S   +  +K EI  ++ L H HI +LY VL TK+KI+ V+E+  GGELF  I ++ R SE+ +R  F+Q++SAV Y HS+G  HRDLKPENLL DEN  LK+ DFGL A K +   D  L T CG+ AY APE++  K Y G++ D+WS G++L+VL  G+LPF+D N+
Sbjct:   11 YELYETIGTGGFAKVKLACHVLTGEMVAIKIMDKNALGSD--LPRVKTEIDALKSLRHQHICQLYHVLETKNKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQILSAVAYVHSQGYAHRDLKPENLLFDENHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV 214          
BLAST of CN185621 vs. ExPASy Swiss-Prot
Match: SIK3_MOUSE (Serine/threonine-protein kinase SIK3 OS=Mus musculus GN=Sik3 PE=1 SV=3)

HSP 1 Score: 192.971 bits (489), Expect = 1.575e-48
Identity = 100/213 (46.95%), Postives = 140/213 (65.73%), Query Frame = 1
Query:  142 ALFGKYELGKLLGCGAFAKVYHARDVLNGRSVAVKVINKNKIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNL 774
            A  G YE+ + +G G FA V  A  ++    VA+K+I+K+++   NL   I RE+ IM+ L HPHI++LY+V+ T+  IY V E+  GGE+F   +A GR +E  +R+ F+Q+++AV +CH R + HRDLK ENLLLD N N+K++DFG S     + T G LL T CG+P Y APE+   K YDG KVD+WS GV+L+VL  G LPF+   L
Sbjct:    3 ARIGYYEIDRTIGKGNFAVVKRATHLVTKAKVAIKIIDKSQLDEENL-KKIFREVQIMKMLCHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKEARRKFKQIVTAVYFCHCRNIVHRDLKAENLLLDANLNIKIADFGFS----NLFTPGQLLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTL 210          
The following BLAST results are available for this feature:
BLAST of CN185621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MARK2_MOUSE2.871e-5049.28Serine/threonine-protein kinase MARK2 OS=Mus muscu... [more]
BRSK1_HUMAN2.871e-5044.98BR serine/threonine-protein kinase 1 OS=Homo sapie... [more]
BRSK2_MOUSE1.425e-4945.45BR serine/threonine-protein kinase 2 OS=Mus muscul... [more]
BRSK2_HUMAN1.425e-4945.45BR serine/threonine-protein kinase 2 OS=Homo sapie... [more]
SIK2_CHICK2.430e-4947.47Serine/threonine-protein kinase SIK2 OS=Gallus gal... [more]
SNF1_SCHPO1.206e-4847.89SNF1-like protein kinase ssp2 OS=Schizosaccharomyc... [more]
SIK2_MOUSE1.206e-4845.54Serine/threonine-protein kinase SIK2 OS=Mus muscul... [more]
SIK1_HUMAN1.206e-4847.37Serine/threonine-protein kinase SIK1 OS=Homo sapie... [more]
MELK_MOUSE1.206e-4849.28Maternal embryonic leucine zipper kinase OS=Mus mu... [more]
SIK3_MOUSE1.575e-4846.95Serine/threonine-protein kinase SIK3 OS=Mus muscul... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0001J23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185621 ID=CN185621; Name=CN185621; organism=Citrus sinensis; type=EST; length=776bp
GAGGCAGCGGCTTTGATTCAGTGGTTTCATTTTTATTCTTCGTTAGCTTT
GTCATCTTCATCGCCTCAGGTTCGATCTCTGGTTATGTCAGAGATCGAAC
GACACAATGTTTCAGAAAATCCTCGCGCCCAGGCCGCCAATGCCTTGTTC
GGGAAGTACGAGCTGGGCAAGCTCCTGGGCTGCGGGGCCTTTGCTAAAGT
CTATCACGCGCGCGACGTCCTCAACGGACGCAGCGTCGCAGTCAAAGTGA
TTAACAAGAACAAGATCATGTCCTCCAATTTAGTCTCCAACATCAAGCGA
GAAATCTCCATCATGCGCCGTTTGAACCACCCTCACATCGTCAAGCTCTA
CGAGGTCTTAGCCACCAAGTCCAAGATTTACTGCGTCATGGAGTTCGTCA
AAGGCGGCGAGCTCTTCGCGAAGATCGCCAAAGGCCGGTTCAGCGAAGAC
CTTAGCCGCAAGTACTTCCAGCAACTCATATCCGCCGTCGGATATTGCCA
CTCGCGCGGAGTCTTCCACCGCGACTTGAAGCCGGAGAACCTTTTGCTGG
ACGAGAACGGGAATTTAAAAGTCTCGGATTTCGGACTCAGCGCCGTGAAG
GATCAGATTCGTACGGACGGGCTGTTGCACACGCTTTGTGGGACCCCTGC
TTACGTGGCACCGGAGATTTTGTCTAAGAAGGGATACGATGGAGCTAAGG
TCGACTTGTGGTCATGCGGCGTCATTTTGTTCGTATTGACGGCAGGTTAC
CTGCCGTTTAACGATCCGAATTTGAT
back to top