CN185607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185607 vs. ExPASy Swiss-Prot
Match: CAF1H_ARATH (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana GN=CAF1-8 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.047e-22 Identity = 74/197 (37.56%), Postives = 96/197 (48.73%), Query Frame = -1 Query: 216 AVYEYHYQTLKSNVDMLKLIQLGLTFSDENGNLPTCGTDKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGELMMSSGIVLSDSMHWVTFHSGYDFGYLLKLLTCQNLPDTQVEFFNLIRIYFPTVYDIKHLMKFCNSLHG--GLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENF 800 A E Y + +VD KLIQLGLT D NG + GT W+ NF +F V +D SIE L+++G++ K E GI F M ++ WVTFH YD YLLK T + LP T F + +VYD+K + C L GL LA + RVG H AGS++ LTA F K+ F Sbjct: 31 ATDEERYMDMSFSVDRAKLIQLGLTLFDINGRIG--GT-----WEINFSDFGV-DDARNEKSIEFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKTRRNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEGLSSRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKVLSPF 219
BLAST of CN185607 vs. ExPASy Swiss-Prot
Match: CAF1C_ARATH (Putative CCR4-associated factor 1 homolog 3 OS=Arabidopsis thaliana GN=CAF1-3 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.674e-22 Identity = 70/199 (35.18%), Postives = 101/199 (50.75%), Query Frame = -1 Query: 207 EYHYQTLKSNVDMLKLIQLGLTFSDENGNLPTCGTDKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGELMMSSGIVLSDSMHWVTFHSGYDFGYLLKLLTC-QNLPDTQVEFFNLIR-IYFPTVYDIKHLMKFCNSLHG--GLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSS 791 E Y+ +K NVD LIQLG T D G T W+ N +FD ++ + SI LK +G+N K E GI F + WV F YD YL+K LT + LP+T+ EF ++ + V+D+K + + C+ L GL ++A++L+++RVG H AGSDS LTA F KL + +S Sbjct: 51 EIRYRDMKFNVDNTHLIQLGFTLFDRRGFAKT--------WEINLSDFDEHKCFKNDKSIAFLKSNGLNLDKIREEGIGIDEFFRDFSQILTEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVQQLLGKFVFDVKKIAESCSGLSSQFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKLTFDLLNS 241
BLAST of CN185607 vs. ExPASy Swiss-Prot
Match: CAF1D_ARATH (Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana GN=CAF1-4 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.327e-21 Identity = 69/199 (34.67%), Postives = 101/199 (50.75%), Query Frame = -1 Query: 207 EYHYQTLKSNVDMLKLIQLGLTFSDENGNLPTCGTDKYCVWQFNFREFDVNEDIFANDSIELLKQSGINFTKNNEIGIDAMRFGELMMSSGIVLSDSMHWVTFHSGYDFGYLLKLLTC-QNLPDTQVEFFNLI-RIYFPTVYDIKHLMKFCNSLHG--GLNKLAELLEVERVGICHQAGSDSLLTASTFRKLKENFFSS 791 E Y+ +K NVD LIQLG T D G T W+ N +F+ ++ + SI LK +G+N K E GI F + WV F YD YL+K LT + LP+T+ EF + ++ V+D+K + + C+ L GL ++A++L+++RVG H AGSDS LTA F KL + +S Sbjct: 46 EIRYRDMKFNVDNTHLIQLGFTLFDRRGITKT--------WEINLSDFNEHKCFKNDKSIAFLKSNGLNLDKIGEEGIGIEEFFRDFSQILKEKDGKITWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDVKKIAESCSGLSSRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKLTFDLLNS 236 The following BLAST results are available for this feature:
BLAST of CN185607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185607 ID=CN185607; Name=CN185607; organism=Citrus sinensis; type=EST; length=800bpback to top |