CN185606

Overview
NameCN185606
Unique NameCN185606
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.722e-42
Identity = 87/186 (46.77%), Postives = 122/186 (65.59%), Query Frame = -2
Query:  125 EYAKYMREVVDKLF-TYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVV-GPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ*IFHYEKNN 676
            EYAK +R +  K+F               KE  G +++   +KINYYP CP+P+LALGV AHTD+SALT ++ N VPGLQ+F + +W+ AK +P+++++HIGD +EILSNGKYK++LHR  VNK+K R+SW VF EPP D +V  PLP++V  E+P K+  + F  +   KL    Q     EKN+
Sbjct:  171 EYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELVSEKND 356          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.052e-41
Identity = 81/177 (45.76%), Postives = 120/177 (67.80%), Query Frame = -2
Query:  152 EYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGG-DDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVV-GPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ 676
            EYAK +RE+  K+              L++  GG +++   +KINYYP CP+P+LALGV AHTD+SALT ++ N VPGLQ+F + +W+ AK +PN++++HIGD +EILSNGKYK++LHR  VNK+K R+SW VF EPP + ++  PLP+ V ++ P  +  + F ++   KL +  Q
Sbjct:  175 EYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPNSIVMHIGDTLEILSNGKYKSILHRGMVNKEKVRISWAVFCEPPKEKIILKPLPETVSEDEPAMFPPRTFAEHIQHKLFRKSQ 351          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.053e-37
Identity = 74/145 (51.03%), Postives = 103/145 (71.03%), Query Frame = -2
Query:  152 AGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTV-VGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ 583
            A  DD+   LKINYYP CP+P+LA+GV AHTD+SAL+ ++ N VPGLQV    RW+ A++ P  +I+H+GD +EILSNG+Y +VLHR  VN++  R+SW VF EPP D+V + PLP+LV + +P ++  + FK +   KL K  Q
Sbjct:  225 AADDDLLLQLKINYYPRCPQPELAVGVEAHTDVSALSFILHNGVPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVNREAVRISWVVFCEPPPDSVLLHPLPELVTEGHPARFTPRTFKQHLDRKLFKKKQ 369          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.270e-36
Identity = 67/114 (58.77%), Postives = 90/114 (78.95%), Query Frame = -2
Query:  251 KEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVV 592
            KE  G +++    KINYYP CP+P+LALGV AHTD+SALT ++ N VPGLQ+F + +W+ AK +PN++I+HIGD IEILSNGKYK++LHR  VNK+K R+SW VF EPP + ++
Sbjct:  206 KEVGGMEELLLQKKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKEKII 319          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 3.510e-29
Identity = 64/180 (35.56%), Postives = 103/180 (57.22%), Query Frame = -2
Query:  152 EEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIE---YMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDD-RWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ 679
            EEY ++M+++  KL  +           ++ A    D +    ++++N+YP CP PD A+G+ AHTD + +T+L  N   GLQVF+DD  W+ A  +P +L++++GD + IL+NG + +VLHR  VN  ++R S      PP+D ++ PLP+LVD    P Y +  +K Y   K     Q
Sbjct:  161 EEYEEHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAHTDSTLMTILYQNNTAGLQVFRDDVGWVTAPPVPGSLVVNVGDLLHILTNGIFPSVLHRARVNHVRSRFSMAYLWGPPSDIMISPLPKLVDPLQSPLYPSLTWKQYLATKATHFNQ 340          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28
Identity = 67/193 (34.72%), Postives = 106/193 (54.92%), Query Frame = -2
Query:  113 EEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYM---LKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDR-WIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKLPQ*IFHYEKNNTSIR 679
            EEY ++M+++  KL              ++ A+   D+ +    L++N+YP CP PD A+G+ AHTD + LT+L  N   GLQVF+DD  W+     P +L++++GD   ILSNG +K+VLHR  VN+ + R+S      P +D  + P+P+LV     P Y++  +K+Y   K         H+ K  + IR
Sbjct:  168 EEYEEHMKKLASKLMWLALNSLGVSEEDIEWASLSSDLNWAQAALQLNHYPVCPEPDRAMGLAAHTDSTLLTILYQNNTAGLQVFRDDLGWVTVPPFPGSLVVNVGDLFHILSNGLFKSVLHRARVNQTRARLSVAFLWGPQSDIKISPVPKLVSPVESPLYQSVTWKEYLRTKAT-------HFNKALSMIR 353          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.285e-27
Identity = 66/175 (37.71%), Postives = 101/175 (57.71%), Query Frame = -2
Query:  182 RAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVD---DENPPKYKAKKFKDY 691
            R V  ++AK + ++ ++L              LK+A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KDD+WID   + ++++I++GDQ+E+++NGKYK+V HR     D TRMS   F  P +D V+ P P LV+   +EN   Y    F DY
Sbjct:  111 REVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVPHRVIAQTDGTRMSLASFYNPASDAVIYPAPALVERDAEENKQIYPKFVFDDY 285          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.290e-27
Identity = 68/196 (34.69%), Postives = 108/196 (55.10%), Query Frame = -2
Query:  182 FKQNVSIINFQRIP*KRCVRCRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVD---DENPPKYKAKKFKDY 754
            F +++ I N   +P       R V  ++AK + ++ ++L              LK A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD +WID   + +++++++GDQ+E+++NGKYK+V+HR    KD  RMS   F  P +D V+ P P LV+   +EN   Y    F DY
Sbjct:   91 FLKHLPISNISEVP-DLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDY 285          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.604e-27
Identity = 67/189 (35.45%), Postives = 104/189 (55.03%), Query Frame = -2
Query:  161 CRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEA-AGGDD--IEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKK-------FKDYSYCKLNK 694
            CR+  +E+A  +  + ++L              LK+   GG D    +  K++ YPPCP+P+L  G+ AHTD   + +L  ++ V GLQ+ KD  WID   + ++++++IGDQ+E+++NGKYK+VLHR     D  RMS   F  P +D V+ P P LV+ E   K + KK       F+DY    + K
Sbjct:  112 CRSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALVEKEAEEKEEKKKEIYPKFVFQDYMNLYIRK 300          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.248e-26
Identity = 71/199 (35.68%), Postives = 111/199 (55.78%), Query Frame = -2
Query:  167 FKQNVSIINFQRIP*KRCVRCRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVP-NEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVD-DENPPKYKAKKFKDYSYCKL 754
            F +++ + N   IP       +A+ +E+A+ + ++ ++L              LK+A  G     +  K++ YPPCPRP+L  G+ AHTD   + +L   N+V GLQ+ KD  WID   + ++++I+IGDQ+E+++NGKYK+V+HR     D  RMS   F  P +D V+ P P LVD +E+  K    KF    Y KL
Sbjct:   91 FLRHLPVSNISEIPDLEQDHRKAM-KEFAEKLEKLAEQLLDLLCENVGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLLKDGEWIDVPPMKHSIVINIGDQLEVITNGKYKSVMHRVIAQPDGNRMSIASFYNPGSDAVMYPAPALVDKEEDQQKQVYPKFVFEDYMKL 288          
The following BLAST results are available for this feature:
BLAST of CN185606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
LDOX_ARATH4.722e-4246.77Leucoanthocyanidin dioxygenase OS=Arabidopsis thal... [more]
LDOX_MALDO1.052e-4145.76Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
LDOX_MAIZE2.053e-3751.03Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
LDOX_VITVI2.270e-3658.77Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
G3OX2_ARATH3.510e-2935.56Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
G3OX1_ARATH2.971e-2834.72Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis th... [more]
ACCO4_PETHY3.285e-2737.711-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_PETHY4.290e-2734.691-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO1_DORSP5.604e-2735.451-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO_ACTDE1.248e-2635.681-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J15_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185606 ID=CN185606; Name=CN185606; organism=Citrus sinensis; type=EST; length=755bp
GAGGAAGGATTATTTATTATTGCTAACACCCGCGATTACATTTCAGAAAC
AAGATCGCAACAACAAACAAGCATCGCTAACGTACAGTGACGAGATCAAA
CATGAGCGGCCAGCGGATACTGGTGTTATTTTTCTCATAATGAAAAATCT
ACTGAGGAAGTTTGTTAAGTTTACAGTAACTGTAATCCTTGAACTTCTTG
GCCTTGTACTTTGGAGGATTTTCATCGTCAACCAGCTGAGGAAGGGGACC
CACCACCGTATCCGCAGGTGGCTCCAAGAAAACTGGCCACGACATTCTCG
TCTTGTCCTTGTTAACAGTGGTTCTATGCAGCACGGCTTTGTACTTGCCA
TTGCTCAGAATCTCGATCTGGTCCCCGATGTGGATGATGAGAGCGTTCGG
GATGTACTTGGCATCGATCCAACGGTCGTCCTTAAAGACTTGCAGACCAG
GAACTTCATTGGGCACAAGAACGGTGAGGGCGGAAAGATCAGTGTGGGCC
ACCACTCCAAGAGCAAGATCAGGACGTGGGCATGGCGGATAGTAATTAAT
CTTGAGCATGTACTCAATGTCGTCTCCTCCCGCTGCTTCTTTCAAAACAC
CTCCTTCGACACCCAGTCCCAACGAAAGATACGTAAACAACTTATCCACC
ACCTCCCTCATGTACTTTGCATACTCCTCATTCACCGCTCTGCAGCGCAC
GCACCGTTTTCAAGGAATCCTTTGAAAATTAATTATTGATACATTTTGTT
TAAAA
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