CN185606

Overview
NameCN185606
Unique NameCN185606
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.129e-26
Identity = 66/179 (36.87%), Postives = 102/179 (56.98%), Query Frame = -2
Query:  167 RAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKA--KKFKDYSYCKL 691
            R V  ++AK + ++ ++L              LK+A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD +WID   + +++++++GDQ+E+++NGKYK+VLHR     D TRMS   F  P +D V+ P P LV+ E   + K    KF    Y KL
Sbjct:  111 REVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAPTLVEKEADQECKQVYPKFVFDDYMKL 289          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.781e-26
Identity = 64/176 (36.36%), Postives = 97/176 (55.11%), Query Frame = -2
Query:  182 RAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDE----NPPKYKAKKFKDY 691
            R V  ++ K + ++ ++L              LK    G     +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD RWID   + +++++++GDQ+E+++NGKYK+V+HR    KD TRMS   F  P  D ++ P P LVD E    N   Y    F DY
Sbjct:  111 REVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGTRMSLASFYNPGNDALIYPAPALVDKEAEEHNKQVYPKFMFDDY 286          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.632e-26
Identity = 62/172 (36.05%), Postives = 99/172 (57.56%), Query Frame = -2
Query:  182 RAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 691
            R V  ++AK + ++ ++L              LK A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD++WID   + +++++++GDQ+E+++NGKYK+V+HR     D TRMS   F  P  D V+ P P L+ +E+   Y    F DY
Sbjct:  111 REVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQTDGTRMSLASFYNPGNDAVIYPAPSLI-EESKQVYPKFVFDDY 281          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: ACCO2_DORSP (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Doritaenopsis sp. GN=ACO2 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.632e-26
Identity = 66/187 (35.29%), Postives = 102/187 (54.55%), Query Frame = -2
Query:  161 CRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEA-AGGDD--IEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLV-----DDENPPKYKAKKFKDYSYCKLNK 694
            CRA  +E+A+ + ++ ++L              LK    GG D    +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD  WI+   +  +++++IGDQ+E+++NGKYK+VLHR     D  RMS   F  P +D V+ P P LV     ++E    Y    F+DY    + K
Sbjct:  112 CRATMKEFARELEKLAERLLDLLCEDLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDREWIEVPPLRYSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALVEKEAEEEEKKEIYPKFVFQDYMNLYIRK 298          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.091e-26
Identity = 66/177 (37.29%), Postives = 99/177 (55.93%), Query Frame = -2
Query:  167 RAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKL 691
            R V +++A+ + ++ + L              LK+A  G     +  K+  YPPCP+ DL  G+ AHTD   + +L  ++ V GLQ+ KDD+WID   + ++++I++GDQ+E+++NGKYK+VLHR     D TRMS   F  P  D V+ P P LV+ E   K    KF    Y KL
Sbjct:  111 RRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVVAQTDGTRMSIASFYNPGNDAVIYPAPALVEKEVEEKEVYPKFVFDDYMKL 287          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 8.091e-26
Identity = 63/175 (36.00%), Postives = 100/175 (57.14%), Query Frame = -2
Query:  182 RAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVD---DENPPKYKAKKFKDY 691
            R V  ++AK + ++ ++L              LK A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD++WID   + +++++++GDQ+E+++NGKYK+VLHR     D TRMS   F  P +D V+ P   LV+   +E+   Y    F DY
Sbjct:  111 REVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAKTLVEKEAEESTQVYPKFVFDDY 285          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.057e-25
Identity = 55/135 (40.74%), Postives = 87/135 (64.44%), Query Frame = -2
Query:  179 DDIEYM--LKINYYPPCPRPDLALGVVAHTDLSALTVLVP-NEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYS 574
            DD++ +  +++NYYPPCP+PD  +G+  H+D   LTVL+  N+V GLQ+ KD +W+  K +PNA I++IGD +EI++NG Y+++ HR  VN +K R+S   F        VGP   LV+ +   ++K    K+Y+
Sbjct:  205 DDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEIITNGTYRSIEHRGVVNSEKERLSIATFHNVGMYKEVGPAKSLVERQKVARFKRLTMKEYN 339          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.057e-25
Identity = 62/174 (35.63%), Postives = 97/174 (55.75%), Query Frame = -2
Query:  182 RAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDD--ENPPKYKAKKFKDY 691
            R   +E+A  + ++ +KL              LK+A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD  W+D   + ++++I++GDQIE+++NGKYK+++HR     D TRMS   F  P  D  + P P L+++  E  P Y    F DY
Sbjct:  111 RKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEVITNGKYKSIMHRVIAQSDGTRMSIASFYNPGDDAFISPAPALLEEKSEVSPTYPKFLFDDY 284          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.057e-25
Identity = 52/126 (41.27%), Postives = 84/126 (66.67%), Query Frame = -2
Query:  179 NYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFL-EPP--ADTVVGPLPQLVDDENPPKYKAKKFKDYS 547
            NYYPPCP+P+L +G + HTD+  +T+L+ +++ GLQV   + W+D    P +L+++IGD +++LSN KY +V HR   N   +RMS   F  E P  +  + GP+ +L+ ++NPPKY+A   KD++
Sbjct:  219 NYYPPCPQPELTMGTIQHTDIGFVTILLQDDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISNNVGSRMSITCFFGESPYQSSKLYGPITELLSEDNPPKYRATTVKDHT 344          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.380e-25
Identity = 63/176 (35.80%), Postives = 98/176 (55.68%), Query Frame = -2
Query:  179 CRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNK-DKTRMSWPVFLE---PPADTVVGPLPQLVDDENPPKYKAKKFKDYS 694
            CR V  EY+K +  + + LF             LK+      +  +   +Y+PPCP PDL  G   H+D S LTVL+P+ + GLQV ++  W D  ++P ALII+IGD +++++N K+ ++ HR   N+  + R+S   F      P   V GP+ +LV +ENPPKY+    +DY+
Sbjct:  177 CRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDMECLKGLRMLC--HYFPPCPEPDLTFGTSKHSDGSFLTVLLPDNIEGLQVCREGYWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVLANRATRARVSVACFFHTHVKPNPRVYGPIKELVSEENPPKYRETTIRDYA 350          
The following BLAST results are available for this feature:
BLAST of CN185606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCO3_PETHY2.129e-2636.871-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO2_SOLLC2.781e-2636.361-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO4_SOLLC3.632e-2636.051-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO2_DORSP3.632e-2635.291-aminocyclopropane-1-carboxylate oxidase 2 OS=Dor... [more]
ACCO_DIOKA8.091e-2637.291-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO1_SOLLC8.091e-2636.001-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
SRG1_ARATH1.057e-2540.74Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
ACCO2_MALDO1.057e-2535.631-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCH3_SOLLC1.057e-2541.271-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH2_ARATH1.380e-2535.801-aminocyclopropane-1-carboxylate oxidase homolog ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J15_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185606 ID=CN185606; Name=CN185606; organism=Citrus sinensis; type=EST; length=755bp
GAGGAAGGATTATTTATTATTGCTAACACCCGCGATTACATTTCAGAAAC
AAGATCGCAACAACAAACAAGCATCGCTAACGTACAGTGACGAGATCAAA
CATGAGCGGCCAGCGGATACTGGTGTTATTTTTCTCATAATGAAAAATCT
ACTGAGGAAGTTTGTTAAGTTTACAGTAACTGTAATCCTTGAACTTCTTG
GCCTTGTACTTTGGAGGATTTTCATCGTCAACCAGCTGAGGAAGGGGACC
CACCACCGTATCCGCAGGTGGCTCCAAGAAAACTGGCCACGACATTCTCG
TCTTGTCCTTGTTAACAGTGGTTCTATGCAGCACGGCTTTGTACTTGCCA
TTGCTCAGAATCTCGATCTGGTCCCCGATGTGGATGATGAGAGCGTTCGG
GATGTACTTGGCATCGATCCAACGGTCGTCCTTAAAGACTTGCAGACCAG
GAACTTCATTGGGCACAAGAACGGTGAGGGCGGAAAGATCAGTGTGGGCC
ACCACTCCAAGAGCAAGATCAGGACGTGGGCATGGCGGATAGTAATTAAT
CTTGAGCATGTACTCAATGTCGTCTCCTCCCGCTGCTTCTTTCAAAACAC
CTCCTTCGACACCCAGTCCCAACGAAAGATACGTAAACAACTTATCCACC
ACCTCCCTCATGTACTTTGCATACTCCTCATTCACCGCTCTGCAGCGCAC
GCACCGTTTTCAAGGAATCCTTTGAAAATTAATTATTGATACATTTTGTT
TAAAA
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