CN185606
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.373e-23 Identity = 51/122 (41.80%), Postives = 72/122 (59.02%), Query Frame = -2 Query: 206 DIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 571 D +++ NYYPPCP P+ LG H D +ALT+L+ ++V GL+V D W +P A++I+IGD LSNG+YK+ LHR VN+ + R S FL P D VV P P ++ P + Sbjct: 224 DSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQHYPDF 345
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.373e-23 Identity = 51/122 (41.80%), Postives = 72/122 (59.02%), Query Frame = -2 Query: 206 DIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 571 D +++ NYYPPCP P+ LG H D +ALT+L+ ++V GL+V D W +P A++I+IGD LSNG+YK+ LHR VN+ + R S FL P D VV P P ++ P + Sbjct: 224 DSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPSAATPQHYPDF 345
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.373e-23 Identity = 47/126 (37.30%), Postives = 77/126 (61.11%), Query Frame = -2 Query: 179 NYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEP---PADTVVGPLPQLVDDENPPKYKAKKFKDYS 547 +YYPPCP+PDL LG+ H+D S LT+L+ + + GLQV D W+D +P AL++++GD +++++N K+ +V HR N R+S F V GP+ +++ +ENPP Y+ +Y+ Sbjct: 221 HYYPPCPQPDLTLGLTKHSDNSFLTILLQDHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACFFSSYLMANPRVYGPIKEILSEENPPNYRDTTITEYA 346
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.094e-22 Identity = 52/133 (39.10%), Postives = 81/133 (60.90%), Query Frame = -2 Query: 176 DDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSY 574 ++ + ++++N+YPPC PDL LG H D S+LT+L + V GLQVF D++W + P A +++IGD LSNG +K+ LHR VN++ R S FL P D VV P +++ K K +K+ D+++ Sbjct: 219 EENDSIMRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQDHVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSMAFFLCPKKDKVVKPPSDILE-----KMKTRKYPDFTW 346
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.865e-22 Identity = 51/130 (39.23%), Postives = 81/130 (62.31%), Query Frame = -2 Query: 182 KINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKD-KTRMSWPVFLEPPADTVVGPLPQLV----DDENPPKYKAKKFKDY 553 K++ YPPCP PDL G+ AHTD + +L ++ V GLQ+ KD W+D + +++++++GDQ+E+++NGKYK+V HR D + RMS F P +D+V+ P P+L+ + E Y F+DY Sbjct: 158 KVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLSQTDGEGRMSIASFYNPGSDSVIFPAPELIGKEAEKEKKENYPRFVFEDY 287
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.427e-22 Identity = 57/167 (34.13%), Postives = 87/167 (52.10%), Query Frame = -2 Query: 191 EEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIE---YMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKF 679 +EY + +R++ +K+ +K+A GD + K+++YPPCPR DL G+ AHTD + +L ++ V GLQ+ KD RWID + + +A++I+ GDQIE+LSNG+YK+ HR R S F P + P +E P KF Sbjct: 113 KEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLKDGRWIDVQPLADAIVINTGDQIEVLSNGRYKSAWHRVLATSHGNRRSIASFYNPSLKATIAPAAGAATEEAAPPALYPKF 279
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 7.088e-22 Identity = 50/123 (40.65%), Postives = 75/123 (60.98%), Query Frame = -2 Query: 206 DDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 574 ++ + ++++NYYPPC +PDL LG H D ++LT+L + V GLQVF +++W + P A +++IGD LSN +YK+ LHR VN + R S FL P D VV P +L+D +Y Sbjct: 221 EENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQDHVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESERKSLAFFLCPKKDRVVTPPRELLDSITSRRY 343
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.694e-21 Identity = 52/111 (46.85%), Postives = 73/111 (65.77%), Query Frame = -2 Query: 182 LGVVAHTDLSALTVLVP-NEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 511 LG+ H+D + LT+L+ NEV GL + KD++W+ K I A +++IGD IEI+SNG YK++ HR +N DK R+S F +P T +GPLP LV EN KYK ++DY Sbjct: 223 LGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKERLSIAAFHDPEYGTKIGPLPDLV-KENGVKYKTIDYEDY 332
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.595e-21 Identity = 55/125 (44.00%), Postives = 70/125 (56.00%), Query Frame = -2 Query: 206 GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 580 G D I +++NYYPPC RP LG H D ++LT+L + V GLQV + RW + +A +++IGD LSNG+YK+ LHR VN R S FL P D VV P LVD NP Y Sbjct: 199 GNDSI---MRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFFLCPEMDKVVAPPGTLVDAANPRAY 320
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21 Identity = 50/118 (42.37%), Postives = 71/118 (60.17%), Query Frame = -2 Query: 206 MLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 559 ++++NYYP C RP LG H D ++LT+L + V GL+V+ + RW + P AL++++GD LSN +Y++ LHR VN R S FL P DTVV P +LVDD +P Y Sbjct: 213 IMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQDHVGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNSTAPRRSLAFFLCPEMDTVVRPPEELVDDHHPRVY 330 The following BLAST results are available for this feature:
BLAST of CN185606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185606 ID=CN185606; Name=CN185606; organism=Citrus sinensis; type=EST; length=755bpback to top |