CN185606

Overview
NameCN185606
Unique NameCN185606
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21
Identity = 55/125 (44.00%), Postives = 70/125 (56.00%), Query Frame = -2
Query:  206 GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 580
            G D I   +++NYYPPC RP   LG   H D ++LT+L  + V GLQV  + RW   +   +A +++IGD    LSNG+YK+ LHR  VN    R S   FL P  D VV P   LVD  NP  Y
Sbjct:  199 GNDSI---MRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVDASNPRAY 320          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21
Identity = 49/131 (37.40%), Postives = 79/131 (60.31%), Query Frame = -2
Query:  170 LKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDR-WIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPA-DTVVGPLPQLVDDENPPKYKAKKFKDYSYCK 556
            +++N+YP CP P+ A+G+ AHTD + LT+L  +   GLQVF+++  W+  +  P  L+++IGD   ILSNGK  +V+HR  VN  ++R+S       PA D  + P+ +L     P  Y++  +K+Y   K
Sbjct:  207 IRLNHYPVCPEPERAMGLAAHTDSTILTILHQSNTGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVVHRAKVNHTRSRISIAYLWGGPAGDVQIAPISKLTGPAEPSLYRSITWKEYLQIK 337          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.001e-21
Identity = 63/188 (33.51%), Postives = 94/188 (50.00%), Query Frame = -2
Query:  158 RAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDD----ENP----PKYKAKKFKDYSYCKLNKL 691
            RAV EEY+K +  +  KL              L +A    D++  + +NYYP CP+PDL LG+  HTD   +T+L+ ++V GLQ  +D  + WI  K +  A ++++GD    LSNG++K   H+  VN   +R+S   F  P  + +V PL     +    E P      YK K   D    +L KL
Sbjct:  152 RAVTEEYSKVLMGLACKLLEVLSEAMGLEKEALTKACV--DMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGESWITVKPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSSTSRLSIATFQNPAPEAIVYPLKINEGEKSIMEEPMTFMEMYKKKMSTDLELARLKKL 337          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.837e-21
Identity = 55/125 (44.00%), Postives = 70/125 (56.00%), Query Frame = -2
Query:  206 GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 580
            G D I   +++NYYPPC RP   LG   H D ++LT+L  + V GLQV  + RW   +   +A +++IGD    LSNG+YK+ LHR  VN    R S   FL P  D VV P   LVD  NP  Y
Sbjct:  199 GNDSI---MRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVDAANPRAY 320          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.337e-20
Identity = 52/149 (34.90%), Postives = 83/149 (55.70%), Query Frame = -2
Query:  158 DIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDD--RWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENP---------PKYKAKKFKDYSYCKLNKL 571
            D++  + +N+YP CP+PDL LG+  HTD   +T+L+ ++V GLQ  +DD   WI  + +  A ++++GD   +LSNG++K   H+  VN + +R+S   F  P  + +V PL  + + E P           YK K  KD    +L KL
Sbjct:  193 DMDQKVVVNFYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGKTWITVQPVEGAFVVNLGDHGHLLSNGRFKNADHQAVVNSNSSRLSIATFQNPAQEAIVYPL-SVREGEKPILEAPITYTEMYKKKMSKDLELARLKKL 340          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.746e-20
Identity = 46/125 (36.80%), Postives = 77/125 (61.60%), Query Frame = -2
Query:  182 KINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 553
            K++ YP CP+P++  G+ AHTD   + +L  ++ V GLQ+ KD  WID   + ++++I++GDQ+E+++NG+YK+++HR    K+  RMS   F  P +D  + P   L   E   +Y +  F DY
Sbjct:  161 KVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVVTQKEGNRMSIASFYNPGSDAEISPASSLACKET--EYPSFVFDDY 283          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.890e-20
Identity = 48/102 (47.06%), Postives = 63/102 (61.76%), Query Frame = -2
Query:  251 LKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVV 556
            L++N YPPCP+P    G++ HTD   LT+L  ++V GLQ+ KD+RWI  K  P ALII+IGD  +  SNG YK+V HR   N    R S   F+ P  D V+
Sbjct:  195 LRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQDQVGGLQLIKDNRWIAVKPNPKALIINIGDLFQAWSNGMYKSVEHRVMTNPKVERFSTAYFMCPSYDAVI 296          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.635e-20
Identity = 60/186 (32.26%), Postives = 92/186 (49.46%), Query Frame = -2
Query:  158 VNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDD--RWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDD----ENP----PKYKAKKFKDYSYCKLNKL 685
            V EEY++ +  +  KL              L  A    D++  + +NYYP CP+PDL LG+  HTD   +T+L+ ++V GLQ  +D+   WI  + +  A ++++GD    LSNG++K   H+  VN + +R+S   F  P  D  V PL     +    E P      YK K  +D    +L KL
Sbjct:  156 VTEEYSERLMSLACKLLEVLSEAMGLEKESLTNACV--DMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPDATVYPLKVREGEKAILEEPITFAEMYKRKMGRDLELARLKKL 339          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.665e-20
Identity = 52/148 (35.14%), Postives = 80/148 (54.05%), Query Frame = -2
Query:  158 DIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDD--RWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDD----ENP----PKYKAKKFKDYSYCKLNKL 571
            D++  + +NYYP CP+PDL LG+  HTD   +T+L+ ++V GLQ  +DD   WI  + +  A ++++GD    LSNG++K   H+  VN + +R+S   F  P  +  V PL     +    E P      YK K  +D    +L KL
Sbjct:  191 DMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPLKVREGEKAIMEEPITFAEMYKRKMGRDLELARLKKL 338          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.930e-19
Identity = 58/186 (31.18%), Postives = 95/186 (51.08%), Query Frame = -2
Query:  161 AVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDD--RWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPL-----PQLVDDEN---PPKYKAKKFKDYSYCKLNK 688
            AV ++Y++ + E+  KL              L +A    D++  + +N+YP CP PDL LG+  HTD   +T+L+ ++V GLQ  KD+   WI  + +  A ++++GD    LSNG++K   H+  VN + +R+S   F  P  + +V PL      + + DE       Y+ K  KD    +L K
Sbjct:  158 AVTQKYSEKLMELACKLLDVLSEAMGLEKEALTKACV--DMDQKVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEAIVYPLKIREGEKSIMDEPITFAEMYRRKMSKDLELARLKK 341          
The following BLAST results are available for this feature:
BLAST of CN185606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
GAO1A_WHEAT6.001e-2144.00Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
G3OX4_ARATH6.001e-2137.40Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
FL3H_CALCH6.001e-2133.51Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
GAO1D_WHEAT7.837e-2144.00Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
FL3H_MALDO1.337e-2034.90Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
ACCO1_BRAJU1.746e-2036.801-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
G2OX8_ARATH3.890e-2047.06Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
FL3H_ARATH6.635e-2032.26Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
FL3H_MATIN8.665e-2035.14Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_PETHY1.930e-1931.18Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J15_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185606 ID=CN185606; Name=CN185606; organism=Citrus sinensis; type=EST; length=755bp
GAGGAAGGATTATTTATTATTGCTAACACCCGCGATTACATTTCAGAAAC
AAGATCGCAACAACAAACAAGCATCGCTAACGTACAGTGACGAGATCAAA
CATGAGCGGCCAGCGGATACTGGTGTTATTTTTCTCATAATGAAAAATCT
ACTGAGGAAGTTTGTTAAGTTTACAGTAACTGTAATCCTTGAACTTCTTG
GCCTTGTACTTTGGAGGATTTTCATCGTCAACCAGCTGAGGAAGGGGACC
CACCACCGTATCCGCAGGTGGCTCCAAGAAAACTGGCCACGACATTCTCG
TCTTGTCCTTGTTAACAGTGGTTCTATGCAGCACGGCTTTGTACTTGCCA
TTGCTCAGAATCTCGATCTGGTCCCCGATGTGGATGATGAGAGCGTTCGG
GATGTACTTGGCATCGATCCAACGGTCGTCCTTAAAGACTTGCAGACCAG
GAACTTCATTGGGCACAAGAACGGTGAGGGCGGAAAGATCAGTGTGGGCC
ACCACTCCAAGAGCAAGATCAGGACGTGGGCATGGCGGATAGTAATTAAT
CTTGAGCATGTACTCAATGTCGTCTCCTCCCGCTGCTTCTTTCAAAACAC
CTCCTTCGACACCCAGTCCCAACGAAAGATACGTAAACAACTTATCCACC
ACCTCCCTCATGTACTTTGCATACTCCTCATTCACCGCTCTGCAGCGCAC
GCACCGTTTTCAAGGAATCCTTTGAAAATTAATTATTGATACATTTTGTT
TAAAA
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