CN185606

Overview
NameCN185606
Unique NameCN185606
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.521e-19
Identity = 44/112 (39.29%), Postives = 68/112 (60.71%), Query Frame = -2
Query:  242 DIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPL 571
            D++  + +NYYP CP+PDL LG+  HTD   +T+L+ ++V GLQ  +D    WI  + +P A ++++GD    LSNG++K   H+  VN + +R+S   F  P  D  V PL
Sbjct:  193 DMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVPGAFVVNLGDHGHFLSNGRFKNADHQAVVNSECSRLSIATFQNPSPDATVYPL 304          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.634e-18
Identity = 58/188 (30.85%), Postives = 93/188 (49.47%), Query Frame = -2
Query:  158 RAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDD----ENP----PKYKAKKFKDYSYCKLNKL 691
            R+V +EY++ +  +  KL              L  A    D++  + +N+YP CP+PDL LG+  HTD   +T+L+ ++V GLQ  +D    WI  + +  A ++++GD    LSNG++K   H+  VN + +R+S   F  P  +  V PL     +    E P      Y+ K  KD    +L KL
Sbjct:  155 RSVTQEYSEKLMGLACKLLEVLSEAMDLDKDALTNACV--DMDQKVVVNFYPQCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNHSRLSIATFQNPAPEATVYPLKIREGEKAVLEGPITFAEMYRRKMSKDLELARLKKL 340          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.641e-18
Identity = 56/169 (33.14%), Postives = 89/169 (52.66%), Query Frame = -2
Query:  203 CRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVN-KDKTRMSWPVF----LEPPADTVVGPLPQLVDDENPPKYK 694
            C  +  EY+K + ++ + +F             LKE      + +ML  + +PPCP P+   G   HTD S LT+L+ +   GLQV  D  WID    P ALI ++GD ++++SN K+ ++ HR   N  ++ R+S   F       P+  V GP+ +L+ + NPPKY+
Sbjct:  167 CGEIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGL-WML-CHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNNGGLQVLYDGYWIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRILANGGEEPRISVACFFVHTFTSPSSRVYGPIKELLSELNPPKYR 333          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.755e-18
Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = -2
Query:  242 DIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPL 571
            D+E  + INYYP CP+PDL LGV  HTD   +T+L+ + V GLQ  +D    WI  + +  A ++++GD    LSNG+++   H+  VN   +R+S   F  P  + +V PL
Sbjct:  193 DMEQKVLINYYPTCPQPDLTLGVRRHTDPGTITILLQDMVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFRNADHQAVVNSTSSRLSIATFQNPAQNAIVYPL 304          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.210e-18
Identity = 51/148 (34.46%), Postives = 78/148 (52.70%), Query Frame = -2
Query:  158 DIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLP----QLVDDENP----PKYKAKKFKDYSYCKLNKL 571
            D++  + +NYYP CP+P+L LG+  HTD   +T+L+ ++V GLQ  +D    WI  + +  A ++++GD    LSNG++K   H+  VN + +RMS   F  P  +  V PL     +    E P      YK K  +D     L KL
Sbjct:  193 DMDQKVIVNYYPKCPQPNLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRMSIATFQNPAPNATVYPLKIREGEKAVMEEPITFAEMYKRKMSRDIEMATLKKL 340          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.059e-17
Identity = 41/129 (31.78%), Postives = 74/129 (57.36%), Query Frame = -2
Query:  179 MLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQ--VFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYS 559
            M+  NYYPPCP P   LG   H D + +T+L   ++PGLQ  + KD  WI  + IP A ++++G  +++++N K++  +HR   +  + R+S    + P     + P  +L++ +NPP YK   + +++
Sbjct:  196 MMLTNYYPPCPDPSSTLGSGGHYDGNLITLL-QQDLPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTDPTRDRVSIATLIGPDYSCTIEPAKELLNQDNPPLYKPYSYSEFA 323          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.257e-17
Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = -2
Query:  242 DIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPL 571
            D++  + +N+YP CP+PDL LG+  HTD   +T+L+ + V GLQ  +D    WI  + I  A ++++GD    +SNG++K   H+  VN + +R+S   F  P  D  V PL
Sbjct:  195 DMDQKVVVNFYPRCPQPDLTLGLKRHTDPGTITLLLQDLVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNGRFKNADHQAVVNGESSRLSIATFQNPAPDARVWPL 306          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14
Identity = 42/140 (30.00%), Postives = 71/140 (50.71%), Query Frame = -2
Query:  164 MLKINYYPPCPRPDL-------ALGVVAHTDLSALTVLVPNEVPGLQV-FKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLN 559
            +L++N+YPPCP  +         +G   HTD   ++VL  N   GLQ+   D  WI       +   ++GD +++++NG++K+V HR   N  K+R+S   F  P     + PL  L+D+E+   Y+   + +Y     N
Sbjct:  169 ILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISVLRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCKKSRVSMIYFAGPSLTQRIAPLTCLIDNEDERLYEEFTWSEYKNSTYN 308          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.526e-13
Identity = 39/136 (28.68%), Postives = 71/136 (52.21%), Query Frame = -2
Query:  161 KINYYPPCPRPDLA----LGVVAHTDLSALTVLVPNEVPGLQV-FKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNK 553
            ++N+YPPCP         +G   HTD   ++VL  N   GLQ+   D  W+       +  I++GD +++++NG++K+V HR   +  K+R+S   F  P     + PLP ++      K +   +K++++C+  K
Sbjct:  181 RLNHYPPCPEVQALNRNLVGFGEHTDPQIISVLRSNSTSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTNGRFKSVKHRVLADTTKSRLSMIYFGGPALSENIAPLPSVM-----LKGEECLYKEFTWCEYKK 311          
BLAST of CN185606 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.526e-13
Identity = 38/133 (28.57%), Postives = 69/133 (51.88%), Query Frame = -2
Query:  176 MLKINYYPPCPRPDL----ALGVVAHTDLSALTVLVPNEVPGLQV-FKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSY 559
            + ++N+YP CP   +     +G   HTD   +++L  N   G Q+  +D  WI      ++  I++GD +++++NG++K+V HR   N    R+S   F  PP    + PLP L+      K K   +K++++
Sbjct:  175 LFRVNHYPACPELAINGENLIGFGEHTDPQIISILRSNNTSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTNGRFKSVRHRVLANGIDPRLSMIYFCGPPLSEKIAPLPSLM------KGKESLYKEFTW 301          
The following BLAST results are available for this feature:
BLAST of CN185606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
FL3H_DIACA2.521e-1939.29Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
FL3H_VITVI1.634e-1830.85Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
GSL_ARATH3.641e-1833.14Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
FNSI_PETCR4.755e-1839.29Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
FL3H_PETCR6.210e-1834.46Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
HY6H_HYONI1.059e-1731.78Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
FL3H_HORVU5.257e-1737.50Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
G2OX1_ARATH1.096e-1430.00Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]
G2OX_PHACN3.526e-1328.68Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]
G2OX1_PEA3.526e-1328.57Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J15_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185606 ID=CN185606; Name=CN185606; organism=Citrus sinensis; type=EST; length=755bp
GAGGAAGGATTATTTATTATTGCTAACACCCGCGATTACATTTCAGAAAC
AAGATCGCAACAACAAACAAGCATCGCTAACGTACAGTGACGAGATCAAA
CATGAGCGGCCAGCGGATACTGGTGTTATTTTTCTCATAATGAAAAATCT
ACTGAGGAAGTTTGTTAAGTTTACAGTAACTGTAATCCTTGAACTTCTTG
GCCTTGTACTTTGGAGGATTTTCATCGTCAACCAGCTGAGGAAGGGGACC
CACCACCGTATCCGCAGGTGGCTCCAAGAAAACTGGCCACGACATTCTCG
TCTTGTCCTTGTTAACAGTGGTTCTATGCAGCACGGCTTTGTACTTGCCA
TTGCTCAGAATCTCGATCTGGTCCCCGATGTGGATGATGAGAGCGTTCGG
GATGTACTTGGCATCGATCCAACGGTCGTCCTTAAAGACTTGCAGACCAG
GAACTTCATTGGGCACAAGAACGGTGAGGGCGGAAAGATCAGTGTGGGCC
ACCACTCCAAGAGCAAGATCAGGACGTGGGCATGGCGGATAGTAATTAAT
CTTGAGCATGTACTCAATGTCGTCTCCTCCCGCTGCTTCTTTCAAAACAC
CTCCTTCGACACCCAGTCCCAACGAAAGATACGTAAACAACTTATCCACC
ACCTCCCTCATGTACTTTGCATACTCCTCATTCACCGCTCTGCAGCGCAC
GCACCGTTTTCAAGGAATCCTTTGAAAATTAATTATTGATACATTTTGTT
TAAAA
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