CN185587
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSEF5 (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.023e-14 Identity = 41/108 (37.96%), Postives = 69/108 (63.89%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V+ + T+ +A+++++ +KVY+ PA TG+ AG ++ +L +AG +NV +K GS NP N V A FK L A+++P+ + K G++V E Sbjct: 58 PAAIQKAMEAARRNMIQVDLNGT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVHATFKGLKAMQSPESIAAKRGKSVQE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSEE4 (30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.023e-14 Identity = 42/108 (38.89%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V+ + T+ +A + ++ +KVY+ PA TG+ AG ++ +L +AG +NV +K GS NP N V A FK L A+++P+ + K G+TV E Sbjct: 58 PAAIQKAMEAARRNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVHATFKGLKAMQSPESIAAKRGKTVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_ALTMD (30S ribosomal protein S5 OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.642e-14 Identity = 44/108 (40.74%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ V+ + HT+ H I+ + +KVY+ PA TG+ AG ++ +L +AG +NV SK GS NP N V+A AL + +P V K G +V E Sbjct: 57 PAAIQKAMEKARRNMVDVDLNG-HTLQHPIKGRHSGSKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLSKCYGSTNPINVVRATINALTEMNSPAKVAAKRGLSVEE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_MANSM (30S ribosomal protein S5 OS=Mannheimia succiniciproducens (strain MBEL55E) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.506e-14 Identity = 43/108 (39.81%), Postives = 66/108 (61.11%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ V HE T+ H ++ + ++V++ PA TG+ AG ++ +L +AG +NV SK GS NP N V+A AL +++P+ V K G+TV E Sbjct: 57 PAAIQKAMEKARRNMINVALHEG-TLQHPVKGIHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVRNVLSKAYGSTNPINVVRATIDALANMKSPEMVAAKRGKTVDE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_HAES2 (30S ribosomal protein S5 OS=Haemophilus somnus (strain 2336) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.506e-14 Identity = 44/108 (40.74%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ V +E T+ H I+ S+ ++V++ PA TG+ AG ++ +L +AG +NV SK GS NP N V+A AL +++P+ V K G+TV E Sbjct: 57 PAAIQKAMEKARRNMITVALNEG-TLQHPIKGSHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVRNVLSKAYGSTNPINVVRATIDALANMKSPEMVAAKRGKTVDE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_HAES1 (30S ribosomal protein S5 OS=Haemophilus somnus (strain 129Pt) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.506e-14 Identity = 44/108 (40.74%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ V +E T+ H I+ S+ ++V++ PA TG+ AG ++ +L +AG +NV SK GS NP N V+A AL +++P+ V K G+TV E Sbjct: 57 PAAIQKAMEKARRNMITVALNEG-TLQHPIKGSHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVRNVLSKAYGSTNPINVVRATIDALANMKSPEMVAAKRGKTVDE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_BAUCH (30S ribosomal protein S5 OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=rpsE PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.506e-14 Identity = 37/108 (34.26%), Postives = 66/108 (61.11%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA +K +N+ + + T+ H+I+ + ++V++ PA TG+ AG ++ +L + G +NV +K GS NP N V+A ALN +++P+ + K G+T+ E Sbjct: 57 PTAIQKAMDKARRNMTTIVLNSGGTLQHSIKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVTGIRNVLAKTYGSTNPINVVRATINALNKMKSPEMIAAKRGKTIEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_ACTP2 (30S ribosomal protein S5 OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.506e-14 Identity = 43/108 (39.81%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ V +E T+ H ++ S+ ++V++ PA TG+ AG ++ +L +AG +NV SK GS NP N V+A AL +++P+ V K G+TV E Sbjct: 57 PAAIQKAMEKARRNMINVALNEG-TLQHPVKGSHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVRNVLSKAYGSTNPINVVRATIDALANMKSPEMVAAKRGKTVEE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_LEGPL (30S ribosomal protein S5 OS=Legionella pneumophila (strain Lens) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.885e-14 Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 PIA+QKA ++ +N+ Y+ TI H I +Y +KV++ PA TG+ AG ++ +L + G +N+ +K +GS NP N V+A AL I TP V K G+TV E Sbjct: 58 PIAIQKAMDQAKKNMVYIPLSGT-TIFHEITWNYGASKVFMKPASEGTGIIAGGAMRAVLEVLGVQNILAKSIGSTNPSNIVRATIGALTHIGTPDYVAAKRGKTVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_LEGPH (30S ribosomal protein S5 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.885e-14 Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 PIA+QKA ++ +N+ Y+ TI H I +Y +KV++ PA TG+ AG ++ +L + G +N+ +K +GS NP N V+A AL I TP V K G+TV E Sbjct: 58 PIAIQKAMDQAKKNMVYIPLSGT-TIFHEITWNYGASKVFMKPASEGTGIIAGGAMRAVLEVLGVQNILAKSIGSTNPSNIVRATIGALTHIGTPDYVAAKRGKTVEE 164 The following BLAST results are available for this feature:
BLAST of CN185587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185587 ID=CN185587; Name=CN185587; organism=Citrus sinensis; type=EST; length=681bpback to top |