CN185587
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSEU2 (30S ribosomal protein S5 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.004e-13 Identity = 40/108 (37.04%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V+ + T+ +A+++++ +KVY+ PA TG+ AG ++ +L +AG +NV +K GS NP N V A FK L +++P+ + K G+ V E Sbjct: 58 PAAIQKAMEAARRNMIQVDLNGT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVHATFKGLKGMQSPESIAAKRGKRVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSESM (30S ribosomal protein S5 OS=Pseudomonas syringae pv. tomato GN=rpsE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.004e-13 Identity = 40/108 (37.04%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V+ + T+ +A+++++ +KVY+ PA TG+ AG ++ +L +AG +NV +K GS NP N V A FK L +++P+ + K G+ V E Sbjct: 58 PAAIQKAMEAARRNMIQVDLNGT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVHATFKGLKGMQSPESIAAKRGKRVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSEPF (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain Pf0-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.004e-13 Identity = 41/108 (37.96%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V+ + T+ +A+++++ +KVY+ PA TG+ AG ++ +L +AG +NV +K GS NP N V A FK L A+++P+ + K G V E Sbjct: 58 PAAIQKAMEAARRNMIQVDLNGT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVHATFKGLKAMQSPESIAAKRGLRVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PASMU (30S ribosomal protein S5 OS=Pasteurella multocida GN=rpsE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.004e-13 Identity = 43/108 (39.81%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ V +E T+ H I+ ++ ++V++ PA TG+ AG ++ +L +AG +NV SK GS NP N V+A AL +++P+ V K G+TV E Sbjct: 57 PAAIQKAMEKARRNMINVALNEG-TLQHPIKGAHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVRNVLSKAYGSTNPINVVRATIDALANMKSPEMVAAKRGKTVDE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_HAEDU (30S ribosomal protein S5 OS=Haemophilus ducreyi GN=rpsE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.004e-13 Identity = 43/108 (39.81%), Postives = 66/108 (61.11%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ V +E T+ H ++ S+ ++V++ PA TG+ AG ++ +L +AG NV SK GS NP N V+A AL +++P+ V K G+TV E Sbjct: 57 PAAIQKAMEKARRNMINVALNEG-TLQHPVKGSHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLSKAYGSTNPINVVRATIDALANMKSPEMVAAKRGKTVEE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_VIBPA (30S ribosomal protein S5 OS=Vibrio parahaemolyticus GN=rpsE PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 42/106 (39.62%), Postives = 64/106 (60.38%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTV 322 P A+QKA EK +N+ + +E T+ H ++ + +KVY+ PA TG+ AG ++ +L +AG NV SK GS NP N V+A AL ++++P+ V K G TV Sbjct: 58 PAAIQKAMEKARRNMTTIALNEG-TLHHPVKGRHSGSKVYMQPAAEGTGVIAGGAMRAVLEVAGVHNVLSKAYGSTNPINIVRATIDALGSMKSPEMVAAKRGLTV 162
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_VIBHB (30S ribosomal protein S5 OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=rpsE PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 42/106 (39.62%), Postives = 64/106 (60.38%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTV 322 P A+QKA EK +N+ + +E T+ H ++ + +KVY+ PA TG+ AG ++ +L +AG NV SK GS NP N V+A AL ++++P+ V K G TV Sbjct: 58 PAAIQKAMEKARRNMTTIALNEG-TLHHPVKGRHSGSKVYMQPAAEGTGVIAGGAMRAVLEVAGVHNVLSKAYGSTNPINIVRATIDALGSMKSPEMVAAKRGLTV 162
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSEA6 (30S ribosomal protein S5 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=rpsE PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +NL V+ + +T+ H I+ + +KVY+ PA TG+ AG ++ +L +AG +NV SK GS NP N V+A AL + +P V K G +V + Sbjct: 58 PAAIQKAMEKARRNLVDVDLNG-NTLQHPIKGRHSGSKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLSKCYGSTNPINVVRATINALTEMTSPDQVAAKRGLSVTQ 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_LARHH (30S ribosomal protein S5 OS=Laribacter hongkongensis (strain HLHK9) GN=rpsE PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 39/108 (36.11%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P+A+QKA ++ +++ + T+ HA+ + T V++ PAP +G+KAG ++ + G NV +KV GS NP+N V+A L I TP D+ K G+TV E Sbjct: 59 PVAVQKAMDQARRSMVKIPLRNG-TLQHAVIGKHGATTVFMQPAPEGSGVKAGGAMRQVFDAIGVHNVSAKVHGSTNPYNVVRATLNGLMKINTPADIAAKRGKTVAE 165
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_HAHCH (30S ribosomal protein S5 OS=Hahella chejuensis (strain KCTC 2396) GN=rpsE PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 38/108 (35.19%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P+A+QKA + +N+ V + +T+ + ++ + KV++ PA TG+ AG ++ +L +AG +NV +K GS NP N V+A F+ L A++ P+++ K G+TV E Sbjct: 58 PVAIQKAMDAARKNMITVTLNG-NTLQYPVKARHGSAKVFMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVRATFEGLKAMQAPEEIAAKRGKTVEE 164 The following BLAST results are available for this feature:
BLAST of CN185587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185587 ID=CN185587; Name=CN185587; organism=Citrus sinensis; type=EST; length=681bpback to top |