CN185587
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_COXBU (30S ribosomal protein S5 OS=Coxiella burnetii GN=rpsE PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 41/108 (37.96%), Postives = 63/108 (58.33%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V + T+ HAI+ ++ + V + PA TG+ AG ++ I + G +NV +K +GS NP N V+A FK L +ETP+ V K G+ + E Sbjct: 59 PSAIQKATENARRNMISVPLYGA-TLHHAIKATHASSTVLMLPASEGTGVIAGNAMRAIFEVMGVQNVLAKCIGSSNPINVVRATFKGLKQMETPESVAAKRGKAIEE 165
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RT05_HUMAN (28S ribosomal protein S5, mitochondrial OS=Homo sapiens GN=MRPS5 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.712e-13 Identity = 39/106 (36.79%), Postives = 62/106 (58.49%), Query Frame = 2 Query: 11 ALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 A +KA + +LHY+ER+E+HTI H I +K+T + + P G++ R + TI L G K++ +KV GS N + + LF+ L+ ET + + +K G VVE Sbjct: 267 AFRKAKNRAVHHLHYIERYEDHTIFHDISLRFKRTHIKMKKQPKGYGLRCHRAIITICRLIGIKDMYAKVSGSINMLSLTQGLFRGLSRQETHQQLADKKGLHVVE 372
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSE14 (30S ribosomal protein S5 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rpsE PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.712e-13 Identity = 40/108 (37.04%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V+ + T+ +A+++++ +KVY+ PA TG+ AG ++ +L +AG +NV +K GS NP N V A FK L +++P+ + K G+ V E Sbjct: 58 PAAIQKAMEAARRNMIQVDLNCT-TLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVHATFKGLKGMQSPESIAAKRGKRVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_VIBFM (30S ribosomal protein S5 OS=Vibrio fischeri (strain MJ11) GN=rpsE PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13 Identity = 39/106 (36.79%), Postives = 65/106 (61.32%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTV 322 P A+QK+ EK +N+ + +E T+ HA++ + +KVY+ PA TG+ AG ++ +L + G +NV +K GS NP N V+A L+++++P+ V K G TV Sbjct: 57 PAAIQKSMEKARRNMFTIALNEG-TLHHAVKGRHTGSKVYMQPAAEGTGIIAGGAMRAVLEVVGVRNVLAKAYGSTNPINVVRATIAGLSSVKSPEMVAAKRGLTV 161
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_VIBF1 (30S ribosomal protein S5 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=rpsE PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13 Identity = 39/106 (36.79%), Postives = 65/106 (61.32%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTV 322 P A+QK+ EK +N+ + +E T+ HA++ + +KVY+ PA TG+ AG ++ +L + G +NV +K GS NP N V+A L+++++P+ V K G TV Sbjct: 57 PAAIQKSMEKARRNMFTIALNEG-TLHHAVKGRHTGSKVYMQPAAEGTGIIAGGAMRAVLEVVGVRNVLAKAYGSTNPINVVRATIAGLSSVKSPEMVAAKRGLTV 161
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_STRMK (30S ribosomal protein S5 OS=Stenotrophomonas maltophilia (strain K279a) GN=rpsE PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13 Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P+A+QK+ E+ +NL V+ + T+ H I+ + +V++ PA TG+ AG ++ +L G KNV +K GSRNP N V+A K L+A ++P + K G+ V E Sbjct: 70 PVAIQKSMEQARKNLVSVDLNNG-TLWHTIKDGHGAARVFMQPASEGTGVIAGGAMRAVLEAVGVKNVLAKATGSRNPINLVRATVKGLSAAQSPARIAAKRGKKVEE 176
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_STRM5 (30S ribosomal protein S5 OS=Stenotrophomonas maltophilia (strain R551-3) GN=rpsE PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13 Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P+A+QK+ E+ +NL V+ + T+ H I+ + +V++ PA TG+ AG ++ +L G KNV +K GSRNP N V+A K L+A ++P + K G+ V E Sbjct: 70 PVAIQKSMEQARKNLVSVDLNNG-TLWHTIKDGHGAARVFMQPASEGTGVIAGGAMRAVLEAVGVKNVLAKATGSRNPINLVRATVKGLSAAQSPARIAAKRGKKVEE 176
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_SHEAM (30S ribosomal protein S5 OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=rpsE PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13 Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ VE +E T+ H ++ + ++VY+ PA TG+ AG ++ +L +AG NV SK GS NP N V+A AL +++P V K G +V E Sbjct: 59 PAAIQKAMEKARRNMVTVELNEG-TLHHPVKGRHTGSRVYMQPASQGTGIIAGGAMRAVLEVAGVHNVLSKAYGSTNPINIVRATVDALTHMKSPAQVAAKRGLSVEE 165
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSYIN (30S ribosomal protein S5 OS=Psychromonas ingrahamii (strain 37) GN=rpsE PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.236e-13 Identity = 41/108 (37.96%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ V+ + +T+ H I+ + +KVY+ PA TG+ AG ++ +L + G +NV SK GS NP N V+A AL + +P+ + K G +V E Sbjct: 58 PAAIQKAMEKARRNIRDVQL-KGNTLQHPIKGRHSGSKVYMQPASEGTGIIAGGAMRAVLEVVGVQNVLSKAYGSTNPINVVRATLDALENMNSPEQIAAKRGLSVNE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_HAEIN (30S ribosomal protein S5 OS=Haemophilus influenzae GN=rpsE PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.921e-13 Identity = 42/108 (38.89%), Postives = 66/108 (61.11%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ V +E T+ H ++ + ++V++ PA TG+ AG ++ +L +AG +NV SK GS NP N V+A AL +++P+ V K G+TV E Sbjct: 57 PAAIQKAMEKARRNMINVALNEG-TLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVRNVLSKAYGSTNPINVVRATIDALANMKSPEMVAAKRGKTVDE 163 The following BLAST results are available for this feature:
BLAST of CN185587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185587 ID=CN185587; Name=CN185587; organism=Citrus sinensis; type=EST; length=681bpback to top |