CN185587
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSEAE (30S ribosomal protein S5 OS=Pseudomonas aeruginosa GN=rpsE PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 40/108 (37.04%), Postives = 65/108 (60.19%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V+ + T+ + ++++ +KVY+ PA TG+ AG ++ +L +AG +NV +K GS NP N V A FK L ++ P+ V K G++V E Sbjct: 58 PAAIQKAMEAARRNMIQVDLNGT-TLQYPTKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVYATFKGLKNMQAPEAVAAKRGKSVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSEAB (30S ribosomal protein S5 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rpsE PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 40/108 (37.04%), Postives = 65/108 (60.19%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V+ + T+ + ++++ +KVY+ PA TG+ AG ++ +L +AG +NV +K GS NP N V A FK L ++ P+ V K G++V E Sbjct: 58 PAAIQKAMEAARRNMIQVDLNGT-TLQYPTKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVYATFKGLKNMQAPEAVAAKRGKSVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSEA8 (30S ribosomal protein S5 OS=Pseudomonas aeruginosa (strain LESB58) GN=rpsE PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 40/108 (37.04%), Postives = 65/108 (60.19%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V+ + T+ + ++++ +KVY+ PA TG+ AG ++ +L +AG +NV +K GS NP N V A FK L ++ P+ V K G++V E Sbjct: 58 PAAIQKAMEAARRNMIQVDLNGT-TLQYPTKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVYATFKGLKNMQAPEAVAAKRGKSVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSEA7 (30S ribosomal protein S5 OS=Pseudomonas aeruginosa (strain PA7) GN=rpsE PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 40/108 (37.04%), Postives = 65/108 (60.19%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V+ + T+ + ++++ +KVY+ PA TG+ AG ++ +L +AG +NV +K GS NP N V A FK L ++ P+ V K G++V E Sbjct: 58 PAAIQKAMEAARRNMIQVDLNGT-TLQYPTKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVYATFKGLKNMQAPEAVAAKRGKSVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_CHRVO (30S ribosomal protein S5 OS=Chromobacterium violaceum GN=rpsE PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 36/106 (33.96%), Postives = 60/106 (56.60%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTV 322 P+A+QKA E+ N+ ++ + T+ H ++ + T+V + PA TG+KAG ++ I G NV +K+ GS NP+N V+A L+ I TP + K G ++ Sbjct: 59 PVAVQKAMEQARHNMMKIKLYNG-TVKHTVEGRHGATRVLIQPAKDGTGVKAGGPMRAIFDAMGIHNVSAKIHGSTNPYNVVRATLDGLSKINTPAQIAAKRGLSI 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_ALHEH (30S ribosomal protein S5 OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.450e-12 Identity = 37/106 (34.91%), Postives = 62/106 (58.49%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTV 322 P A+QKA EK N+ V + T+ +A+ ++ +KVY+ PA TG+ AG ++ + + G ++V +K +GSRNP N V+A K L +++P V + G+ V Sbjct: 57 PAAIQKAMEKARANMKRVHL-DGGTLQYAVTANHGSSKVYMQPASAGTGIIAGGAMRAVFEVVGVQDVLAKAIGSRNPINVVRATIKGLTDVDSPDAVAARRGKKV 161
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_VIBCM (30S ribosomal protein S5 OS=Vibrio cholerae serotype O1 (strain M66-2) GN=rpsE PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 41/106 (38.68%), Postives = 63/106 (59.43%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTV 322 P A+QKA EK +++ + +E T+ H ++ + +KVY+ PA TG+ AG ++ +L +AG NV SK GS NP N V+A AL +++P+ V K G TV Sbjct: 58 PAAIQKAMEKARRSMVTIALNEG-TLHHPVKGRHSGSKVYMQPAAEGTGVIAGGAMRAVLEVAGVHNVLSKAYGSTNPINIVRATIDALVDVKSPEMVAAKRGLTV 162
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_VIBCH (30S ribosomal protein S5 OS=Vibrio cholerae GN=rpsE PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 41/106 (38.68%), Postives = 63/106 (59.43%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTV 322 P A+QKA EK +++ + +E T+ H ++ + +KVY+ PA TG+ AG ++ +L +AG NV SK GS NP N V+A AL +++P+ V K G TV Sbjct: 58 PAAIQKAMEKARRSMVTIALNEG-TLHHPVKGRHSGSKVYMQPAAEGTGVIAGGAMRAVLEVAGVHNVLSKAYGSTNPINIVRATIDALVDVKSPEMVAAKRGLTV 162
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_VIBC3 (30S ribosomal protein S5 OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=rpsE PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 41/106 (38.68%), Postives = 63/106 (59.43%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTV 322 P A+QKA EK +++ + +E T+ H ++ + +KVY+ PA TG+ AG ++ +L +AG NV SK GS NP N V+A AL +++P+ V K G TV Sbjct: 58 PAAIQKAMEKARRSMVTIALNEG-TLHHPVKGRHSGSKVYMQPAAEGTGVIAGGAMRAVLEVAGVHNVLSKAYGSTNPINIVRATIDALVDVKSPEMVAAKRGLTV 162
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_ROSS1 (30S ribosomal protein S5 OS=Roseiflexus sp. (strain RS-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRT 319 P A++K E +NL V TI H +Q + +KV L PA TG+ AGR V+ +L +AG K+V SK GS NP N VKA FKAL+A+ + ++ G T Sbjct: 59 PEAIRKGVEAAKKNLIRVPLSGT-TIPHEVQMEFAASKVRLLPAAPGTGVIAGRGVRPVLEMAGIKDVLSKRYGSNNPINVVKATFKALSALTSLEEQARMRGMT 162 The following BLAST results are available for this feature:
BLAST of CN185587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185587 ID=CN185587; Name=CN185587; organism=Citrus sinensis; type=EST; length=681bpback to top |