CN185587
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_ACIBL (30S ribosomal protein S5 OS=Acidobacteria bacterium (strain Ellin345) GN=rpsE PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.893e-12 Identity = 40/108 (37.04%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A++K E +NL V + +I H + Y +V L PAP TG+ AG V+ ++ AG +NV +K +G+ NPHN +KA F+AL + ++V G+TV E Sbjct: 62 PQAIRKGIESAKKNLVKVNLSQT-SIPHQVLGRYGSGRVMLKPAPEGTGVIAGGAVRAVMTSAGVQNVLTKSIGTTNPHNVIKATFEALKQLRDRREVAAGRGKTVEE 168
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_SHEFN (30S ribosomal protein S5 OS=Shewanella frigidimarina (strain NCIMB 400) GN=rpsE PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.472e-12 Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ VE + T+ H ++ + +KVY+ PA TG+ AG ++ +L +AG NV SK GS NP N V+A AL +++P + K G V E Sbjct: 58 PAAIQKAMEKARRNMVTVELNAG-TLHHPVKGRHTGSKVYMQPASQGTGIIAGGAMRAVLEVAGVHNVLSKAYGSTNPINIVRATVDALVHMKSPAQIAAKRGLNVDE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_SHEDO (30S ribosomal protein S5 OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=rpsE PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.472e-12 Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ VE + T+ H ++ + +KVY+ PA TG+ AG ++ +L +AG NV SK GS NP N V+A AL +++P + K G V E Sbjct: 58 PAAIQKAMEKARRNMVTVELNAG-TLHHPVKGRHTGSKVYMQPASQGTGIIAGGAMRAVLEVAGVHNVLSKAYGSTNPINIVRATVDALVHMKSPAQIAAKRGLNVDE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSYWF (30S ribosomal protein S5 OS=Psychrobacter sp. (strain PRwf-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.472e-12 Identity = 41/108 (37.96%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V+ + T+ H I + +KVY+ PA TG+ AG V+ +L AG +NV +K GS NP N V+A F L + +P+ K G++V E Sbjct: 56 PAAIQKALEAAKRNMITVDL-DGATLQHPIIARHGASKVYMQPANEGTGVIAGGAVRAVLESAGVENVLTKCYGSTNPTNVVRATFNGLRDMSSPEKAAAKRGKSVDE 162
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_GEOSL (30S ribosomal protein S5 OS=Geobacter sulfurreducens GN=rpsE PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.472e-12 Identity = 38/105 (36.19%), Postives = 57/105 (54.29%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRT 319 P A++K E+ +NL V E HTI + + + +V + PA TG+ AG + + AG NV SK +GS NPHN VKA F L + +P+++ + G T Sbjct: 57 PEAIRKGVEQAKKNLIKVPIVEGHTIPYEVLGHFGAGRVLIKPASAGTGVIAGGAARAVFEAAGLHNVLSKCLGSNNPHNVVKAAFNGLAQLRSPEEIMARRGVT 161
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_CHLP8 (30S ribosomal protein S5 OS=Chlorobaculum parvum (strain NCIB 8327) GN=rpsE PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.229e-12 Identity = 36/86 (41.86%), Postives = 49/86 (56.98%), Query Frame = 2 Query: 77 TIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVEKY 334 TI H I Y KV + PA TG+ AG V+ +L +AG ++ +K +GS NPHN VKA K L +I DV E+ +T+ E Y Sbjct: 85 TIPHPIVAKYGSAKVLMKPATPGTGLIAGGAVRAVLEMAGIHDILTKSLGSSNPHNVVKAAIKGLQSISDANDVAERRSKTLQEVY 170
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_CHLCV (30S ribosomal protein S5 OS=Chlamydophila caviae GN=rpsE PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.229e-12 Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 2 Query: 11 ALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEK 307 A++K E +NL +E E +I H + ++ L PA + TG+ AG ++ IL +AG KN+ +K +GS NP N VKA FKAL ++ + KDV ++ Sbjct: 61 AIRKGGEAARKNLITIESLESGSIPHEVLVDQDGAQLLLKPAKSGTGIVAGSRIRLILEMAGVKNIVAKSLGSNNPMNQVKAAFKALLSLSSRKDVLQR 159
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_TOLAT (30S ribosomal protein S5 OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=rpsE PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 41/108 (37.96%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E+ +N+ VE E T+ H ++ ++ + V++ PA TG+ AG ++ +L +AG NV +K GS NP N V+A +AL I++P+ V K G V E Sbjct: 57 PAAIQKAMEQARRNMVKVELIEG-TLHHHVKGTHAGSTVFMQPASQGTGIIAGGAMRAVLEVAGVHNVLAKTYGSTNPMNVVRATIEALADIKSPEQVAAKRGLRVEE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_SODGM (30S ribosomal protein S5 OS=Sodalis glossinidius (strain morsitans) GN=rpsE PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ V + T+ H I+ + ++V++ PA TG+ AG ++ +L +AG NV +K GS NP N V+A AL +++P+ V K G++V E Sbjct: 57 PAAIQKAMEKARRNMMNVALNSG-TLQHPIKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDALGNMKSPEMVAAKRGKSVEE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_SHESW (30S ribosomal protein S5 OS=Shewanella sp. (strain W3-18-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.217e-12 Identity = 41/108 (37.96%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ VE + T+ H ++ + ++VY+ PA TG+ AG ++ +L +AG NV SK GS NP N V+A AL +++P + K G V E Sbjct: 58 PAAIQKAMEKARRNMVTVELNAG-TLHHPVKGRHTGSRVYMQPASQGTGIIAGGAMRAVLEVAGVHNVLSKAYGSTNPINIVRATVDALVHMKSPSQIAAKRGLNVDE 164 The following BLAST results are available for this feature:
BLAST of CN185587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185587 ID=CN185587; Name=CN185587; organism=Citrus sinensis; type=EST; length=681bpback to top |