CN185577

Overview
NameCN185577
Unique NameCN185577
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length648
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN185577 vs. ExPASy Swiss-Prot
Match: 6PGD_TRYBB (6-phosphogluconate dehydrogenase, decarboxylating OS=Trypanosoma brucei brucei GN=GND PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.760e-18
Identity = 51/112 (45.54%), Postives = 71/112 (63.39%), Query Frame = 2 
Query:  320 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVE---RAKQEGNLPLYGFRDPESFVHSIQKPRVIIMLVKAGPPVDQTIKTLSVYMEKGDCVIDGGNEWYENTERR 646
            +G+ GL VMG NLALNIAEKGF ++V+NRT SK +E ++    A   GNL    F   E+F  S++KPR  ++LV+AG   D T + L    EKGD ++D GN  +++  RR
Sbjct:    5 VGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLK--AFETMEAFAASLKKPRKALILVQAGAATDSTTEQLKKVFEKGDILVDTGNAHFKDQGRR 114
[Close]
BLAST of CN185577 vs. ExPASy Swiss-Prot
Match: 6PGD_CITFR (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Citrobacter freundii GN=gnd PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.760e-18
Identity = 44/103 (42.72%), Postives = 69/103 (66.99%), Query Frame = 2 
Query:  338 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFRDPESFVHSIQKPRVIIMLVKAGPPVDQTIKTLSVYMEKGDCVIDGGNEWYENTERR 646
            AVMG+NLALNI  +G+ +S++NR+  K +E V     +  +P Y  ++   FV S++ PR I+++VKAG   D  I +L  Y++KGD +IDGGN ++++T RR
Sbjct:    1 AVMGRNLALNIESRGYTVSIFNRSREKTEEVVAENPGKKLVPYYTVKE---FVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRR 100
[Close]
BLAST of CN185577 vs. ExPASy Swiss-Prot
Match: 6PGD_CITDI (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Citrobacter diversus GN=gnd PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.760e-18
Identity = 44/103 (42.72%), Postives = 69/103 (66.99%), Query Frame = 2 
Query:  338 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFRDPESFVHSIQKPRVIIMLVKAGPPVDQTIKTLSVYMEKGDCVIDGGNEWYENTERR 646
            AVMG+NLALNI  +G+ +SV+NR+  K +E +     +  +P Y  ++   FV S++ PR I+++VKAG   D  I +L  Y++KGD +IDGGN ++++T RR
Sbjct:    1 AVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPYYTVKE---FVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRR 100
[Close]
BLAST of CN185577 vs. ExPASy Swiss-Prot
Match: 6PGD_CITAM (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Citrobacter amalonaticus GN=gnd PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.760e-18
Identity = 44/103 (42.72%), Postives = 69/103 (66.99%), Query Frame = 2 
Query:  338 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFRDPESFVHSIQKPRVIIMLVKAGPPVDQTIKTLSVYMEKGDCVIDGGNEWYENTERR 646
            AVMG+NLALNI  +G+ +SV+NR+  K +E +     +  +P Y  ++   FV S++ PR I+++VKAG   D  I +L  Y++KGD +IDGGN ++++T RR
Sbjct:    1 AVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPYYTVQE---FVESLETPRRILLMVKAGAGTDSAIDSLKPYLDKGDIIIDGGNTFFQDTIRR 100
[Close]
BLAST of CN185577 vs. ExPASy Swiss-Prot
Match: 6PGD_SHISO (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Shigella sonnei GN=gnd PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.605e-18
Identity = 43/103 (41.75%), Postives = 69/103 (66.99%), Query Frame = 2 
Query:  338 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFRDPESFVHSIQKPRVIIMLVKAGPPVDQTIKTLSVYMEKGDCVIDGGNEWYENTERR 646
            AVMG+NLALNI  +G+ +S++NR+  K +E +     +  +P Y  ++   FV S++ PR I+++VKAG   D  I +L  Y++KGD +IDGGN ++++T RR
Sbjct:    1 AVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKE---FVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRR 100
[Close]
BLAST of CN185577 vs. ExPASy Swiss-Prot
Match: 6PGD_SHIDY (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Shigella dysenteriae GN=gnd PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.605e-18
Identity = 43/103 (41.75%), Postives = 69/103 (66.99%), Query Frame = 2 
Query:  338 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFRDPESFVHSIQKPRVIIMLVKAGPPVDQTIKTLSVYMEKGDCVIDGGNEWYENTERR 646
            AVMG+NLALNI  +G+ +S++NR+  K +E +     +  +P Y  ++   FV S++ PR I+++VKAG   D  I +L  Y++KGD +IDGGN ++++T RR
Sbjct:    1 AVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKE---FVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRR 100
[Close]
BLAST of CN185577 vs. ExPASy Swiss-Prot
Match: 6PGD_SHIBO (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Shigella boydii GN=gnd PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.605e-18
Identity = 43/103 (41.75%), Postives = 69/103 (66.99%), Query Frame = 2 
Query:  338 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFRDPESFVHSIQKPRVIIMLVKAGPPVDQTIKTLSVYMEKGDCVIDGGNEWYENTERR 646
            AVMG+NLALNI  +G+ +S++NR+  K +E +     +  +P Y  ++   FV S++ PR I+++VKAG   D  I +L  Y++KGD +IDGGN ++++T RR
Sbjct:    1 AVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKE---FVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRR 100
[Close]
BLAST of CN185577 vs. ExPASy Swiss-Prot
Match: 6PGD_KLETE (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Klebsiella terrigena GN=gnd PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.605e-18
Identity = 44/103 (42.72%), Postives = 69/103 (66.99%), Query Frame = 2 
Query:  338 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFRDPESFVHSIQKPRVIIMLVKAGPPVDQTIKTLSVYMEKGDCVIDGGNEWYENTERR 646
            AVMG+NLALNI  +G+ +SV+NR+  K +E +     +  +P Y  ++   FV S++ PR I+++VKAG   D  I +L  Y++KGD +IDGGN ++++T RR
Sbjct:    1 AVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPHYTVKE---FVESLETPRRILLMVKAGAGTDSAIDSLKPYLDKGDIIIDGGNTFFQDTIRR 100
[Close]
BLAST of CN185577 vs. ExPASy Swiss-Prot
Match: 6PGD_KLEPL (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Klebsiella planticola GN=gnd PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.149e-18
Identity = 44/103 (42.72%), Postives = 68/103 (66.02%), Query Frame = 2 
Query:  338 AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFRDPESFVHSIQKPRVIIMLVKAGPPVDQTIKTLSVYMEKGDCVIDGGNEWYENTERR 646
            AVMG+NLALNI  +G+ +SV+NR+  K +E +     +  +P Y  ++   FV S++ PR I+++VKAG   D  I +L  Y+ KGD +IDGGN ++++T RR
Sbjct:    1 AVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPHYTVKE---FVESLETPRRILLMVKAGAGTDSAIDSLKPYLNKGDIIIDGGNTFFQDTIRR 100
[Close]
BLAST of CN185577 vs. ExPASy Swiss-Prot
Match: 6PGD_CERCA (6-phosphogluconate dehydrogenase, decarboxylating OS=Ceratitis capitata GN=Pgd PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.031e-18
Identity = 48/109 (44.04%), Postives = 68/109 (62.39%), Query Frame = 2 
Query:  320 IGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKQEGNLPLYGFRDPESFVHSIQKPRVIIMLVKAGPPVDQTIKTLSVYMEKGDCVIDGGNEWYENTERR 646
            I L GLAVMGQNL LN+ +KGF +  YNRT  KV++ ++   +  N+   G    +  V+ ++ PR I++LVKAG  VD  I+ L   +  GD +IDGGN  Y++T RR
Sbjct:    7 IALIGLAVMGQNLVLNMNDKGFVVCAYNRTVEKVNQFLKNEAKGTNV--IGATSLQDMVNKLKLPRKIMLLVKAGSAVDDFIQQLVPLLSPGDVIIDGGNSEYQDTARR 113
The following BLAST results are available for this feature:
BLAST of CN185577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
6PGD_TRYBB2.760e-1845.546-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CITFR2.760e-1842.726-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CITDI2.760e-1842.726-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CITAM2.760e-1842.726-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHISO3.605e-1841.756-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHIDY3.605e-1841.756-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHIBO3.605e-1841.756-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_KLETE3.605e-1842.726-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_KLEPL6.149e-1842.726-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CERCA8.031e-1844.046-phosphogluconate dehydrogenase, decarboxylating ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001I23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001I23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185577 ID=CN185577; Name=CN185577; organism=Citrus sinensis; type=EST; length=648bp
CGTATGAGAACCAAAAAGTTGGCGTATGGGTTGGATTTTGTCCTCTGAGT
CAGAGATCAACTACCGAAGCCACGAAGAGAAACTAAGACAAATAATAATA
ATAAAAGGTTAAAAACAATCCGCAGAGTTTGACCTGTACATTTACAACAA
CTAACAAGGGCTTAAGAGCCAGGCCAATTAATAAATAGACTACATTCAAT
CAAATTGTTTTTTTTTTTCGCAAAACCCAGATGCTCAAATTTCCTAAAGT
CAGTTCATTTTCAAGCATTCTTCGCAGGGTTGAATTTTTCTCAGGTGACT
AAAGATGGTCCAGAGAAGAATTGGCCTAGCTGGCCTTGCTGTCATGGGTC
AAAATCTTGCCCTCAACATTGCTGAGAAAGGATTCCCAATTTCTGTTTAC
AATCGGACGACCTCTAAAGTTGACGAGACTGTTGAACGAGCCAAACAAGA
AGGGAATCTGCCCTTATATGGTTTCCGTGATCCTGAATCCTTTGTTCATT
CAATCCAGAAACCTCGTGTTATAATCATGCTTGTTAAAGCTGGTCCTCCT
GTTGATCAAACAATTAAAACATTGTCTGTTTACATGGAGAAAGGAGATTG
TGTCATTGATGGTGGTAATGAATGGTATGAGAATACCGAGAGGAGACA
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