CN185551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AZ_HUMAN (Histone H2A.Z OS=Homo sapiens GN=H2AFZ PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 7.403e-27 Identity = 61/65 (93.85%), Postives = 63/65 (96.92%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRS RAGLQFPVGRIHR LKSRTT+HGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI Sbjct: 18 VSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 82
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AZ_CHICK (Histone H2A.Z OS=Gallus gallus GN=H2AFZ PE=1 SV=3) HSP 1 Score: 119.013 bits (297), Expect = 7.403e-27 Identity = 61/65 (93.85%), Postives = 63/65 (96.92%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRS RAGLQFPVGRIHR LKSRTT+HGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI Sbjct: 18 VSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 82
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AZ_BOVIN (Histone H2A.Z OS=Bos taurus GN=H2AFZ PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 7.403e-27 Identity = 61/65 (93.85%), Postives = 63/65 (96.92%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRS RAGLQFPVGRIHR LKSRTT+HGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI Sbjct: 18 VSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 82
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AV2_ORYSJ (Probable histone H2A variant 2 OS=Oryza sativa subsp. japonica GN=Os10g0418000 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.403e-27 Identity = 65/96 (67.71%), Postives = 72/96 (75.00%), Query Frame = 1 Query: 94 MSGKGAKGLIMGXXXXXXXXXXXXX-----PISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 M+GKG KGL+ P+SRSSRAG+QFPVGRIHR LK R +A+GRVGATAAVY+AAILEYLTAEVLELAGNASKDLKVKRI Sbjct: 1 MAGKGGKGLLAAKTTAAKAAADKDKDRKKAPVSRSSRAGIQFPVGRIHRQLKGRVSANGRVGATAAVYTAAILEYLTAEVLELAGNASKDLKVKRI 96
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AV2_ARATH (Probable histone H2A variant 2 OS=Arabidopsis thaliana GN=At2g38810 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.403e-27 Identity = 65/93 (69.89%), Postives = 71/93 (76.34%), Query Frame = 1 Query: 94 MSGKGAKGLIMGXXXXXXXXXXXXXP--ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 M+GKG KGL+ ISRSSRAG+QFPVGRIHR LK R +AHGRVGATAAVY+A+ILEYLTAEVLELAGNASKDLKVKRI Sbjct: 1 MAGKGGKGLLAAKTTAAAANKDSVKKKSISRSSRAGIQFPVGRIHRQLKQRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASKDLKVKRI 93
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AZL_XENTR (Histone H2A.Z-like OS=Xenopus tropicalis GN=h2a.zl PE=2 SV=3) HSP 1 Score: 118.627 bits (296), Expect = 9.668e-27 Identity = 60/65 (92.31%), Postives = 64/65 (98.46%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 I+RSSRAGLQFPVGRIHRLLK+RTT+HGRVG TAAVY+AAILEYLTAEVLELAGNASKDLKVKRI Sbjct: 18 ITRSSRAGLQFPVGRIHRLLKNRTTSHGRVGGTAAVYTAAILEYLTAEVLELAGNASKDLKVKRI 82
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AZL_XENLA (Histone H2A.Z-like OS=Xenopus laevis GN=h2a.zl1 PE=2 SV=3) HSP 1 Score: 118.627 bits (296), Expect = 9.668e-27 Identity = 60/65 (92.31%), Postives = 64/65 (98.46%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 I+RSSRAGLQFPVGRIHRLLK+RTT+HGRVG TAAVY+AAILEYLTAEVLELAGNASKDLKVKRI Sbjct: 18 ITRSSRAGLQFPVGRIHRLLKNRTTSHGRVGGTAAVYTAAILEYLTAEVLELAGNASKDLKVKRI 82
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AV_STRPU (Histone H2A.V (Fragment) OS=Strongylocentrotus purpuratus GN=H2A.F/Z PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.263e-26 Identity = 60/65 (92.31%), Postives = 64/65 (98.46%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRS+RAGLQFPVGRIHR LK+RTT+HGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI Sbjct: 15 VSRSARAGLQFPVGRIHRHLKNRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AV_XENTR (Histone H2A.V OS=Xenopus tropicalis GN=h2afv PE=2 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 1.649e-26 Identity = 60/65 (92.31%), Postives = 63/65 (96.92%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRS RAGLQFPVGRIHR LK+RTT+HGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI Sbjct: 18 VSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 82
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AV_XENLA (Histone H2A.V OS=Xenopus laevis GN=h2afv PE=2 SV=3) HSP 1 Score: 117.857 bits (294), Expect = 1.649e-26 Identity = 60/65 (92.31%), Postives = 63/65 (96.92%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRS RAGLQFPVGRIHR LK+RTT+HGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI Sbjct: 18 VSRSQRAGLQFPVGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 82 The following BLAST results are available for this feature:
BLAST of CN185551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 233
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185551 ID=CN185551; Name=CN185551; organism=Citrus sinensis; type=EST; length=366bpback to top |