CN185551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A2_PSAMI (Late histone H2A.2.1 OS=Psammechinus miliaris PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGR+HR LK + RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 16 SRSSRAGLQFPVGRVHRFLKKGNYGN-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1_XENLA (Histone H2A type 1 OS=Xenopus laevis PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSSRAGLQFPVGR+HRLL+ A RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 TRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1_HUMAN (Histone H2A type 1 OS=Homo sapiens GN=HIST1H2AG PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSSRAGLQFPVGR+HRLL+ A RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 TRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1_BOVIN (Histone H2A type 1 OS=Bos taurus PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSSRAGLQFPVGR+HRLL+ A RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 TRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1J_HUMAN (Histone H2A type 1-J OS=Homo sapiens GN=HIST1H2AJ PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSSRAGLQFPVGR+HRLL+ A RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 TRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1H_HUMAN (Histone H2A type 1-H OS=Homo sapiens GN=HIST1H2AH PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSSRAGLQFPVGR+HRLL+ A RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 TRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1E_RAT (Histone H2A type 1-E OS=Rattus norvegicus PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSSRAGLQFPVGR+HRLL+ A RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 TRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_URECA (Histone H2A OS=Urechis caupo PE=3 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 2.639e-16 Identity = 51/91 (56.04%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 94 MSGKGAKGLIMGXXXXXXXXXXXXXPISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 MSG+G G G SRSSRAGLQFPVGRIHRLL+ A R+GA A VY AA++EYL AEVLELAGNA++D K RI Sbjct: 1 MSGRGKGGKAKGKSK------------SRSSRAGLQFPVGRIHRLLRKGNYAE-RIGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_SIPNU (Histone H2A OS=Sipunculus nudus PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 2.639e-16 Identity = 51/91 (56.04%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 94 MSGKGAKGLIMGXXXXXXXXXXXXXPISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 MSG+G G G SRSSRAGLQFPVGRIHRLL+ A R+GA A VY AA++EYL AEVLELAGNA++D K RI Sbjct: 1 MSGRGKGGKAKGKSK------------SRSSRAGLQFPVGRIHRLLRKGNYAE-RIGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A3_CHICK (Histone H2A-III OS=Gallus gallus PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 3.447e-16 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGR+HRLL+ A RVGA A VY AA+LEYLTAE+LELAGN ++D K RI Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEILELAGNPARDNKKTRI 79 The following BLAST results are available for this feature:
BLAST of CN185551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 233
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185551 ID=CN185551; Name=CN185551; organism=Citrus sinensis; type=EST; length=366bpback to top |