CN185551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_PLADU (Histone H2A OS=Platynereis dumerilii PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.501e-16 Identity = 51/91 (56.04%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 94 MSGKGAKGLIMGXXXXXXXXXXXXXPISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 MSG+G G G +RSSRAGLQFPVGRIHRLL+ A RVGA A VY AA++EYL AEVLELAGNA++D K RI Sbjct: 1 MSGRGKGGKAKGKSK------------TRSSRAGLQFPVGRIHRLLRKGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1_MOUSE (Histone H2A type 1 OS=Mus musculus GN=Hist1h2ab PE=1 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 4.501e-16 Identity = 44/64 (68.75%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSSRAGLQFPVGR+HRLL+ + RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 TRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1K_MOUSE (Histone H2A type 1-K OS=Mus musculus GN=Hist1h2ak PE=1 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 4.501e-16 Identity = 44/64 (68.75%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSSRAGLQFPVGR+HRLL+ + RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 TRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1H_MOUSE (Histone H2A type 1-H OS=Mus musculus GN=Hist1h2ah PE=1 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 4.501e-16 Identity = 44/64 (68.75%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSSRAGLQFPVGR+HRLL+ + RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 TRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1F_MOUSE (Histone H2A type 1-F OS=Mus musculus GN=Hist1h2af PE=1 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 4.501e-16 Identity = 44/64 (68.75%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSSRAGLQFPVGR+HRLL+ + RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 TRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1D_HUMAN (Histone H2A type 1-D OS=Homo sapiens GN=HIST1H2AD PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.501e-16 Identity = 44/64 (68.75%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSSRAGLQFPVGR+HRLL+ + RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 TRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1B_HUMAN (Histone H2A type 1-B/E OS=Homo sapiens GN=HIST1H2AB PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.501e-16 Identity = 44/64 (68.75%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSSRAGLQFPVGR+HRLL+ + RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 TRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_PARLI (Histone H2A OS=Paracentrotus lividus PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.879e-16 Identity = 44/64 (68.75%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGR+HR L+ A RVG A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 16 SRSSRAGLQFPVGRVHRFLRKGNYAK-RVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_CRYNE (Histone H2A OS=Cryptococcus neoformans GN=HTA1 PE=3 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 5.879e-16 Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSS+AGLQFPVGRIHRLLK A R+G+ A VY AA+LEYL AE+LELAGNA++D K RI Sbjct: 17 SRSSKAGLQFPVGRIHRLLKKGNYAQ-RIGSGAPVYLAAVLEYLAAEILELAGNAARDNKKSRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_CAEEL (Histone H2A OS=Caenorhabditis elegans GN=his-3 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.879e-16 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGR+HR+L+ A RVGA A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 18 SRSSRAGLQFPVGRLHRILRKGNYAQ-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80 The following BLAST results are available for this feature:
BLAST of CN185551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 233
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185551 ID=CN185551; Name=CN185551; organism=Citrus sinensis; type=EST; length=366bpback to top |