CN185551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1_PSAMI (Late histone H2A.1 OS=Psammechinus miliaris PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 5.879e-16 Identity = 44/64 (68.75%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSSRAGLQFPVGR+HR LK RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 16 TRSSRAGLQFPVGRVHRFLKKGNYG-SRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_PARAN (Histone H2A, gonadal OS=Parechinus angulosus PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 7.678e-16 Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGR+HR L+ A+ RVGA A VY AA+LEYL AE+LELAGNA++D K RI Sbjct: 16 SRSSRAGLQFPVGRVHRFLRKGNYAN-RVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A3_PSAMI (Late histone H2A.3, gonadal OS=Psammechinus miliaris PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 7.678e-16 Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGR+HR L+ A+ RVGA A VY AA+LEYL AE+LELAGNA++D K RI Sbjct: 16 SRSSRAGLQFPVGRVHRFLRKGNYAN-RVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_USTMA (Histone H2A OS=Ustilago maydis GN=HTA1 PE=3 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 1.003e-15 Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRS++AGLQFPVGRIHRLL+ A RVGA A VY AA+LEYL AE+LELAGNA++D K RI Sbjct: 20 SRSAKAGLQFPVGRIHRLLRKGNYAQ-RVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKSRI 82
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_CHITH (Histone H2A OS=Chironomus thummi thummi PE=3 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.003e-15 Identity = 45/64 (70.31%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGRIHRLL+ RVGA A VY AA++EYL AEVLELAGNA++D K RI Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYGE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_STRPU (Histone H2A, embryonic OS=Strongylocentrotus purpuratus PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.310e-15 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSSRAGLQFPVGR+HR L+ A RVG A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 16 TRSSRAGLQFPVGRVHRFLRKGNYAK-RVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AE_PSAMI (Histone H2A, embryonic OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.310e-15 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSSRAGLQFPVGR+HR L+ A RVG A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 16 TRSSRAGLQFPVGRVHRFLRKGNYAK-RVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_ASTRU (Histone H2A OS=Asterias rubens PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.711e-15 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGR+HR L+ A RVGA A VY AA++EYL AE+LELAGNA++D K RI Sbjct: 16 SRSSRAGLQFPVGRVHRFLRKGNYAE-RVGAGAPVYLAAVMEYLAAEILELAGNAARDNKKTRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AO_CHITH (Histone H2A, orphon OS=Chironomus thummi thummi PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.711e-15 Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGRIHRLL+ A R+GA A VY AA++EYL AE+LELAGNA++D K RI Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGHYAE-RIGAGAPVYLAAVMEYLGAEILELAGNAARDNKKTRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A4_VOLCA (Histone H2A-IV OS=Volvox carteri PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.711e-15 Identity = 45/65 (69.23%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRSS+AGLQFPVGRI R LK A R+GA A VY AA+LEYLTAEVLELAGNA++D K RI Sbjct: 15 VSRSSKAGLQFPVGRIARYLKKGKYAE-RIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRI 78 The following BLAST results are available for this feature:
BLAST of CN185551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 233
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185551 ID=CN185551; Name=CN185551; organism=Citrus sinensis; type=EST; length=366bpback to top |