CN185551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A4_RAT (Histone H2A type 4 OS=Rattus norvegicus PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.711e-15 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRS RAGLQFPVGR+HRLL+ A R+GA VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 SRSFRAGLQFPVGRVHRLLRQGNYAE-RIGAGTPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AL_STRPU (Late histone H2A.L3 OS=Strongylocentrotus purpuratus PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 2.234e-15 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRS+RAGLQFPVGR+HR L+ A RVGA A VY AA+LEYL AE+LELAGNA++D K RI Sbjct: 17 SRSARAGLQFPVGRVHRFLRKGNYAQ-RVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A3_STRPU (Histone H2A-beta, sperm (Fragment) OS=Strongylocentrotus purpuratus PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.234e-15 Identity = 43/63 (68.25%), Postives = 50/63 (79.37%), Query Frame = 1 Query: 178 RSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 RSSRAGLQFPVGR+HR L+ A+ RVGA A VY AA+LEYL AE+LELAGNA++D K RI Sbjct: 9 RSSRAGLQFPVGRVHRFLRKGNYAN-RVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRI 70
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1F_RAT (Histone H2A type 1-F OS=Rattus norvegicus PE=3 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 2.234e-15 Identity = 43/64 (67.19%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSSRAGLQFPVGR+HRLL+ + RVGA A VY AA+LEYLTAE+LELA NA++D K RI Sbjct: 17 TRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEILELAANAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A7_WHEAT (Protein H2A.7 OS=Triticum aestivum GN=H2A-4 PE=2 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 2.918e-15 Identity = 46/65 (70.77%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 ISRSS+AGLQFPVGRI R LK+ A RVGA A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 17 ISRSSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_PODAN (Histone H2A OS=Podospora anserina GN=HTA1 PE=3 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSS+AGL FPVGR+HRLL+ A RVGA A VY AA+LEYL AE+LELAGNA++D K RI Sbjct: 19 SRSSKAGLAFPVGRVHRLLRKGNYAQ-RVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRI 81
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_PHANO (Histone H2A OS=Phaeosphaeria nodorum GN=HTA1 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSS+AGL FPVGR+HRLL+ A RVGA A VY AA+LEYL AE+LELAGNA++D K RI Sbjct: 19 SRSSKAGLAFPVGRVHRLLRKGNYAQ-RVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRI 81
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_NEUCR (Histone H2A OS=Neurospora crassa GN=hh2a PE=3 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSS+AGL FPVGR+HRLL+ A RVGA A VY AA+LEYL AE+LELAGNA++D K RI Sbjct: 19 SRSSKAGLAFPVGRVHRLLRKGNYAQ-RVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRI 81
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_NEOFI (Histone H2A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=hta1 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSS+AGL FPVGR+HRLL+ A RVGA A VY AA+LEYL AE+LELAGNA++D K RI Sbjct: 18 SRSSKAGLAFPVGRVHRLLRKGNYAQ-RVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRI 80
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_MAGGR (Histone H2A OS=Magnaporthe grisea GN=HTA1 PE=2 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSS+AGL FPVGR+HRLL+ A RVGA A VY AA+LEYL AE+LELAGNA++D K RI Sbjct: 19 SRSSKAGLAFPVGRVHRLLRKGNYAQ-RVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRI 81 The following BLAST results are available for this feature:
BLAST of CN185551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 233
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185551 ID=CN185551; Name=CN185551; organism=Citrus sinensis; type=EST; length=366bpback to top |