CN185551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_ASPFU (Histone H2A OS=Aspergillus fumigatus GN=hta1 PE=3 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSS+AGL FPVGR+HRLL+ A RVGA A VY AA+LEYL AE+LELAGNA++D K RI Sbjct: 18 SRSSKAGLAFPVGRVHRLLRKGNYAQ-RVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRI 80
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_ASPCL (Histone H2A OS=Aspergillus clavatus GN=hta1 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15 Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSS+AGL FPVGR+HRLL+ A RVGA A VY AA+LEYL AE+LELAGNA++D K RI Sbjct: 18 SRSSKAGLAFPVGRVHRLLRKGNYAQ-RVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRI 80
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AXA_ARATH (Probable histone H2AXa OS=Arabidopsis thaliana GN=At1g08880 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15 Identity = 45/65 (69.23%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRSS+AGLQFPVGRI R LKS A RVGA A VY +A+LEYL AEVLELAGNA++D K RI Sbjct: 23 VSRSSKAGLQFPVGRIARFLKSGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRI 86
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A3_VOLCA (Histone H2A-III OS=Volvox carteri PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.811e-15 Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRS++AGLQFPVGRI R LK A R+GA A VY AA+LEYLTAEVLELAGNA++D K RI Sbjct: 15 VSRSAKAGLQFPVGRIARYLKKGKYAE-RIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A2_LODEL (Histone H2A.2 OS=Lodderomyces elongisporus GN=HTA2 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.977e-15 Identity = 40/64 (62.50%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSS+AGL FPVGR+HR L++ A R+G++A VY A++LEYLTAE+LELAGNA++D K RI Sbjct: 20 SRSSKAGLTFPVGRVHRFLRNGNYAQ-RIGSSAPVYLASVLEYLTAEILELAGNAARDNKKSRI 82
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_EUPES (Histone H2A OS=Euphorbia esula PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.500e-15 Identity = 44/66 (66.67%), Postives = 50/66 (75.76%), Query Frame = 1 Query: 169 PISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 P+SRS +AGLQFPVGRI R LK A RVG+ A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 23 PVSRSVKAGLQFPVGRIGRFLKKGRYAQ-RVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI 87
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AX_PICAB (Histone H2AX OS=Picea abies PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.500e-15 Identity = 50/91 (54.95%), Postives = 56/91 (61.54%), Query Frame = 1 Query: 94 MSGKGAKGLIMGXXXXXXXXXXXXXPISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 MS GAKG +SRS +AGLQFPVGRI R LK+ A RVGA A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 1 MSSSGAKG--------GRGKAKSTKSVSRSQKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI 82
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A3_LYTPI (Histone H2A, sperm (Fragment) OS=Lytechinus pictus PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.500e-15 Identity = 43/64 (67.19%), Postives = 48/64 (75.00%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGR+HR L+ A RVGA A VY AA+ EYL AE+LELAGNA+ D K RI Sbjct: 3 SRSSRAGLQFPVGRVHRFLRKGNYAQ-RVGAGAPVYLAAVFEYLAAEILELAGNAAPDNKKTRI 65
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A2_ORYSJ (Probable histone H2A.2 OS=Oryza sativa subsp. japonica GN=Os07g0545400 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.500e-15 Identity = 45/65 (69.23%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRSS+AGLQFPVGRI R LK+ A RVGA A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 17 MSRSSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A2_ORYSI (Probable histone H2A.2 OS=Oryza sativa subsp. indica GN=OsI_025469 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.500e-15 Identity = 45/65 (69.23%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRSS+AGLQFPVGRI R LK+ A RVGA A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 17 MSRSSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80 The following BLAST results are available for this feature:
BLAST of CN185551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 233
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185551 ID=CN185551; Name=CN185551; organism=Citrus sinensis; type=EST; length=366bpback to top |