CN185551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AX_CICAR (Histone H2AX OS=Cicer arietinum GN=HIS2A PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.489e-15 Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRSS+AGLQFPVGRI R LK+ A RVGA A VY +A+LEYL AEVLELAGNA++D K RI Sbjct: 20 VSRSSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKNNRI 83
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AXB_ORYSJ (Probable histone H2AXb OS=Oryza sativa subsp. japonica GN=Os12g0530000 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.489e-15 Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRSS+AGLQFPVGRI R LK+ A RVGA A VY +A+LEYL AEVLELAGNA++D K RI Sbjct: 19 VSRSSKAGLQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRI 82
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AXB_ORYSI (Probable histone H2AXb OS=Oryza sativa subsp. indica GN=OsI_037312 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.489e-15 Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRSS+AGLQFPVGRI R LK+ A RVGA A VY +A+LEYL AEVLELAGNA++D K RI Sbjct: 19 VSRSSKAGLQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRI 82
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AXB_ARATH (Probable histone H2AXb OS=Arabidopsis thaliana GN=At1g54690 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.489e-15 Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRSS+AGLQFPVGRI R LK+ A RVGA A VY +A+LEYL AEVLELAGNA++D K RI Sbjct: 23 VSRSSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKTRI 86
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AXA_ORYSJ (Probable histone H2AXa OS=Oryza sativa subsp. japonica GN=Os03g0721900 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.489e-15 Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRSS+AGLQFPVGRI R LK+ A RVGA A VY +A+LEYL AEVLELAGNA++D K RI Sbjct: 19 VSRSSKAGLQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRI 82
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AXA_ORYSI (Probable histone H2AXa OS=Oryza sativa subsp. indica GN=OsI_012923 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.489e-15 Identity = 44/65 (67.69%), Postives = 51/65 (78.46%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRSS+AGLQFPVGRI R LK+ A RVGA A VY +A+LEYL AEVLELAGNA++D K RI Sbjct: 19 VSRSSKAGLQFPVGRIARYLKAGKYAE-RVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKKNRI 82
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A7_ORYSJ (Probable histone H2A.7 OS=Oryza sativa subsp. japonica GN=Os12g0438000 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.489e-15 Identity = 45/64 (70.31%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSS+AGLQFPVGRI R LK+ A RVGA A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 18 SRSSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A7_ORYSI (Probable histone H2A.7 OS=Oryza sativa subsp. indica GN=OsI_036922 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.489e-15 Identity = 45/64 (70.31%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSS+AGLQFPVGRI R LK+ A RVGA A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 18 SRSSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A6_ARATH (Histone H2A.6 OS=Arabidopsis thaliana GN=RAT5 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.489e-15 Identity = 45/64 (70.31%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSS+AGLQFPVGRI R LK+ A RVGA A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 18 SRSSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A4_WHEAT (Histone H2A.4 OS=Triticum aestivum GN=TH254 PE=2 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 8.489e-15 Identity = 45/64 (70.31%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSS+AGLQFPVGRI R LK+ A RVGA A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 18 SRSSKAGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80 The following BLAST results are available for this feature:
BLAST of CN185551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 233
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185551 ID=CN185551; Name=CN185551; organism=Citrus sinensis; type=EST; length=366bpback to top |