CN185551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1_TETPY (Histone H2A.1 OS=Tetrahymena pyriformis GN=HTA2 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 1.109e-14 Identity = 43/65 (66.15%), Postives = 50/65 (76.92%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRS+RAGLQFPVGRI R LK+ + R+G A VY AA+LEYL AEVLELAGNA+KD K RI Sbjct: 20 VSRSARAGLQFPVGRISRFLKNGRYSE-RIGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRI 83
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AX_TETTH (Histone H2A.X OS=Tetrahymena thermophila GN=HTA1 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.448e-14 Identity = 44/65 (67.69%), Postives = 49/65 (75.38%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRS+RAGLQFPVGRI R LK + RVG A VY AA+LEYL AEVLELAGNA+KD K RI Sbjct: 20 VSRSARAGLQFPVGRISRFLKHGRYSE-RVGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRI 83
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A2_ARATH (Probable histone H2A.2 OS=Arabidopsis thaliana GN=At3g20670 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.448e-14 Identity = 45/64 (70.31%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSS+AGLQFPVGRI R LK+ A RVGA A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 18 SRSSKAGLQFPVGRIARFLKNGKYAT-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AX_TETPY (Histone H2A.X OS=Tetrahymena pyriformis GN=HTA1 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.891e-14 Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +SRS+RAGLQFPVGRI R LK + R+G A VY AA+LEYL AEVLELAGNA+KD K RI Sbjct: 20 VSRSARAGLQFPVGRISRFLKHGRYSE-RIGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRI 83
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A2_PICGU (Histone H2A.2 OS=Pichia guilliermondii GN=HTA2 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.891e-14 Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRS++AGL FPVGRIHRLL+ A RVG+ A VY ++LEYLTAE+LELAGNA++D K RI Sbjct: 16 SRSAKAGLTFPVGRIHRLLRKGNYAQ-RVGSGAPVYLTSVLEYLTAEILELAGNAARDNKKSRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1_PICGU (Histone H2A.1 OS=Pichia guilliermondii GN=HTA1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.891e-14 Identity = 41/64 (64.06%), Postives = 50/64 (78.12%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRS++AGL FPVGRIHRLL+ A RVG+ A VY ++LEYLTAE+LELAGNA++D K RI Sbjct: 17 SRSAKAGLTFPVGRIHRLLRKGNYAQ-RVGSGAPVYLTSVLEYLTAEILELAGNAARDNKKSRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A8_ORYSI (Probable histone H2A.8 OS=Oryza sativa subsp. indica GN=OsI_036919 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.470e-14 Identity = 44/64 (68.75%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSS+ GLQFPVGRI R LK+ A RVGA A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 18 SRSSKGGLQFPVGRIARFLKAGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1_ARATH (Probable histone H2A.1 OS=Arabidopsis thaliana GN=At1g51060 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.470e-14 Identity = 44/64 (68.75%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSS+AGLQFPVGRI R LK A RVGA A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 18 TRSSKAGLQFPVGRIARFLKKGKYAE-RVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRI 80
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A4_ORYSJ (Probable histone H2A.4 OS=Oryza sativa subsp. japonica GN=Os05g0461400 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.226e-14 Identity = 42/66 (63.64%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 169 PISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 P+SRS +AGLQFPVGRI R LK + R+G A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 26 PVSRSVKAGLQFPVGRIGRYLKQGRYSQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI 90
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A4_ORYSI (Probable histone H2A.4 OS=Oryza sativa subsp. indica GN=OsI_019561 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.226e-14 Identity = 42/66 (63.64%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 169 PISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 P+SRS +AGLQFPVGRI R LK + R+G A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 26 PVSRSVKAGLQFPVGRIGRYLKQGRYSQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI 90 The following BLAST results are available for this feature:
BLAST of CN185551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 233
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185551 ID=CN185551; Name=CN185551; organism=Citrus sinensis; type=EST; length=366bpback to top |