CN185551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1_MEDTR (Probable histone H2A.1 OS=Medicago truncatula GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.226e-14 Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 ++RS+RAGLQFPVGRI R LK A RVG A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 23 VTRSTRAGLQFPVGRIGRYLKKGRYAQ-RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI 86
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A5_ORYSJ (Probable histone H2A.5 OS=Oryza sativa subsp. japonica GN=Os01g0502700 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.213e-14 Identity = 46/90 (51.11%), Postives = 54/90 (60.00%), Query Frame = 1 Query: 97 SGKGAKGLIMGXXXXXXXXXXXXXPISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +G GA G + +SRS +AGLQFPVGRI R LK A R+G A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 4 AGAGAGGKLKKGAAGRKAGGPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI 92
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A5_ORYSI (Probable histone H2A.5 OS=Oryza sativa subsp. indica GN=OsI_002060 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.213e-14 Identity = 46/90 (51.11%), Postives = 54/90 (60.00%), Query Frame = 1 Query: 97 SGKGAKGLIMGXXXXXXXXXXXXXPISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +G GA G + +SRS +AGLQFPVGRI R LK A R+G A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 4 AGAGAGGKLKKGAAGRKAGGPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQ-RIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI 92
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A3_WHEAT (Histone H2A.2.2 OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.503e-14 Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 ++RS +AGLQFPVGRI R LK A RVG+ A VY AA+LEYL AEVLELAGNA+KD K RI Sbjct: 22 VTRSIKAGLQFPVGRIGRYLKKGRYAQ-RVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNKKSRI 85
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A2_PEA (Histone H2A.2 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.503e-14 Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 ++RS RAGLQFPVGRI R LK A RVG A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 24 VTRSVRAGLQFPVGRIGRFLKKGRYAQ-RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI 87
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1_ASHGO (Histone H2A.1 OS=Ashbya gossypii GN=HTA1 PE=3 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 5.503e-14 Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRS++AGL FPVGR+HRLL+ A R+G+ A VY A+LEYL AE+LELAGNA++D K RI Sbjct: 17 SRSAKAGLTFPVGRVHRLLRKGNYAQ-RIGSGAPVYMTAVLEYLAAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_KLULA (Histone H2A OS=Kluyveromyces lactis GN=HTA1 PE=3 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 7.187e-14 Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRS++AGL FPVGR+HRLL+ A R+G+ A VY A+LEYL AE+LELAGNA++D K RI Sbjct: 17 SRSAKAGLTFPVGRVHRLLRKGNYAQ-RIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A5_WHEAT (Protein H2A.5 OS=Triticum aestivum GN=H2A-2 PE=2 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 7.187e-14 Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 ++RS +AGLQFPVGRI R LK A RVG+ A VY AA+LEYL AEVLELAGNA+KD K RI Sbjct: 13 VTRSVKAGLQFPVGRIGRYLKKGRYAQ-RVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRI 76
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A4_ARATH (Probable histone H2A.4 OS=Arabidopsis thaliana GN=At5g02560 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.187e-14 Identity = 42/66 (63.64%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 169 PISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 P+SRS ++GLQFPVGRI R LK + RVG A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 24 PVSRSVKSGLQFPVGRIGRYLKKGRYSK-RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI 88
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A3_MEDTR (Probable histone H2A.3 OS=Medicago truncatula PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.187e-14 Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 ++RS RAGLQFPVGRI R LK A RVG A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 25 VTRSIRAGLQFPVGRIGRYLKKGRYAQ-RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI 88 The following BLAST results are available for this feature:
BLAST of CN185551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 233
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185551 ID=CN185551; Name=CN185551; organism=Citrus sinensis; type=EST; length=366bpback to top |