CN185551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A2_MEDTR (Probable histone H2A.2 OS=Medicago truncatula GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.187e-14 Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 ++RS RAGLQFPVGRI R LK A RVG A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 24 VTRSIRAGLQFPVGRIGRYLKKGRYAQ-RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI 87
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A2_ASHGO (Histone H2A.2 OS=Ashbya gossypii GN=HTA2 PE=3 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 7.187e-14 Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRS++AGL FPVGR+HRLL+ A R+G+ A VY A+LEYL AE+LELAGNA++D K RI Sbjct: 17 SRSAKAGLTFPVGRVHRLLRKGNYAQ-RIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1_WHEAT (Histone H2A.1 OS=Triticum aestivum GN=H2A-9 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 7.187e-14 Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 ++RS +AGLQFPVGRI R LK A RVG+ A VY AA+LEYL AEVLELAGNA+KD K RI Sbjct: 13 VTRSVKAGLQFPVGRIGRYLKKGRYAQ-RVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRI 76
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1_PEA (Histone H2A.1 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.187e-14 Identity = 42/65 (64.62%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 172 ISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 ++RS RAGLQFPVGR+ R LK A RVG A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 24 VTRSVRAGLQFPVGRVGRFLKKGRYAQ-RVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRI 87
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A2_YEAST (Histone H2A.2 OS=Saccharomyces cerevisiae GN=HTA2 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 9.386e-14 Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRS++AGL FPVGR+HRLL+ A R+G+ A VY A+LEYL AE+LELAGNA++D K RI Sbjct: 18 SRSAKAGLTFPVGRVHRLLRRGNYAQ-RIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRI 80
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A2_PICST (Histone H2A.2 OS=Pichia stipitis GN=HTA2 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.386e-14 Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRS++AGL FPVGR+HRLL+ A RVG+ A VY ++LEYL AE+LELAGNA++D K RI Sbjct: 17 SRSAKAGLTFPVGRVHRLLRKGNYAQ-RVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A2_DEBHA (Histone H2A.2 OS=Debaryomyces hansenii GN=HTA2 PE=3 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 9.386e-14 Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRS++AGL FPVGR+HRLL+ A RVG+ A VY ++LEYL AE+LELAGNA++D K RI Sbjct: 17 SRSAKAGLTFPVGRVHRLLRKGNYAQ-RVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1_YEAST (Histone H2A.1 OS=Saccharomyces cerevisiae GN=HTA1 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 9.386e-14 Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRS++AGL FPVGR+HRLL+ A R+G+ A VY A+LEYL AE+LELAGNA++D K RI Sbjct: 18 SRSAKAGLTFPVGRVHRLLRRGNYAQ-RIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRI 80
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1_PICST (Histone H2A.1 OS=Pichia stipitis GN=HTA2 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.386e-14 Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRS++AGL FPVGR+HRLL+ A RVG+ A VY ++LEYL AE+LELAGNA++D K RI Sbjct: 17 SRSAKAGLTFPVGRVHRLLRKGNYAQ-RVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1_DEBHA (Histone H2A.1 OS=Debaryomyces hansenii GN=HTA1 PE=3 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 9.386e-14 Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRS++AGL FPVGR+HRLL+ A RVG+ A VY ++LEYL AE+LELAGNA++D K RI Sbjct: 17 SRSAKAGLTFPVGRVHRLLRKGNYAQ-RVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRI 79 The following BLAST results are available for this feature:
BLAST of CN185551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 233
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185551 ID=CN185551; Name=CN185551; organism=Citrus sinensis; type=EST; length=366bpback to top |