CN185551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AZ_CANAL (Histone H2A.Z OS=Candida albicans GN=HTZ1 PE=3 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 2.387e-17 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 S S+RAGLQFPVGR+ R LK RVG+ AA+Y A+LEYLTAEVLELAGNA+KDLKVKRI Sbjct: 23 SHSARAGLQFPVGRVKRYLKRNAQNKIRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRI 86
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_MYTTR (Histone H2A OS=Mytilus trossulus PE=3 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 3.117e-17 Identity = 48/64 (75.00%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGRIHRLL+ A GRVGA A VY AA+LEYL AEVLELAGNA++D K RI Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYA-GRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_AGABI (Histone H2A OS=Agaricus bisporus PE=2 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 4.071e-17 Identity = 52/91 (57.14%), Postives = 60/91 (65.93%), Query Frame = 1 Query: 94 MSGKGAKGLIMGXXXXXXXXXXXXXPISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 MSGKG G G +SRSS+AGLQFPVGR+HRLLK A RVGA A VY AA+LEYL AE+LELAGNA++D K +RI Sbjct: 1 MSGKGKAGKSGGKAGSETKS------MSRSSKAGLQFPVGRVHRLLKKGNYAQ-RVGAGAPVYMAAVLEYLAAEILELAGNAARDNKKQRI 84
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AZ_PICGU (Histone H2A.Z OS=Pichia guilliermondii GN=HTZ1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.071e-17 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 S S+RAGLQFPVGRI R LK RVG+ +A+Y A+LEYLTAEVLELAGNA+KDLKVKRI Sbjct: 23 SHSARAGLQFPVGRIKRYLKRSAQNKVRVGSKSAIYLTAVLEYLTAEVLELAGNAAKDLKVKRI 86
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A1A_HUMAN (Histone H2A type 1-A OS=Homo sapiens GN=HIST1H2AA PE=1 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 4.071e-17 Identity = 47/64 (73.44%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGRIHRLL+ A R+GA A VY AA+LEYLTAE+LELAGNAS+D K RI Sbjct: 17 SRSSRAGLQFPVGRIHRLLRKGNYAE-RIGAGAPVYLAAVLEYLTAEILELAGNASRDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AZ_PICST (Histone H2A.Z OS=Pichia stipitis GN=HTZ1 PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 5.317e-17 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 S S+RAGLQFPVGRI R LK RVG+ +A+Y A+LEYLTAEVLELAGNA+KDLKVKRI Sbjct: 23 SHSARAGLQFPVGRIKRYLKRTAQNKIRVGSKSAIYLTAVLEYLTAEVLELAGNAAKDLKVKRI 86
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AZ_DEBHA (Histone H2A.Z OS=Debaryomyces hansenii GN=HTZ1 PE=3 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 5.317e-17 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 S S+RAGLQFPVGRI R LK RVG+ +A+Y A+LEYLTAEVLELAGNA+KDLKVKRI Sbjct: 23 SHSARAGLQFPVGRIKRYLKRTAQNKIRVGSKSAIYLTAVLEYLTAEVLELAGNAAKDLKVKRI 86
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPTN (Histone H2A.Z OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=HTZ1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.317e-17 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 S S++AGLQFP G + R LK+ T RVGA AAVY A+LEYLTAEVLELAGNA+KDLKVKRI Sbjct: 25 SHSAKAGLQFPRGSVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRI 88
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_LITVA (Histone H2A OS=Litopenaeus vannamei PE=1 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 6.945e-17 Identity = 52/91 (57.14%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 94 MSGKGAKGLIMGXXXXXXXXXXXXXPISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 MSG+G G + G SRSSRAGLQFPVGRIHRLL+ A RVGA A VY AA++EYL AEVLELAGNA++D K RI Sbjct: 1 MSGRGKGGKVKGKSK------------SRSSRAGLQFPVGRIHRLLRKGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AJ_CHICK (Histone H2A.J OS=Gallus gallus GN=H2A-IX PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.945e-17 Identity = 46/64 (71.88%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGR+HRLL+ A RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRI 79 The following BLAST results are available for this feature:
BLAST of CN185551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 233
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185551 ID=CN185551; Name=CN185551; organism=Citrus sinensis; type=EST; length=366bpback to top |