CN185551
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_DROHY (Histone H2A OS=Drosophila hydei GN=His2A PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.547e-16 Identity = 51/91 (56.04%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 94 MSGKGAKGLIMGXXXXXXXXXXXXXPISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 MSG+G G + G SRS+RAGLQFPVGRIHRLL+ A RVGA A VY AA++EYL AEVLELAGNA++D K RI Sbjct: 1 MSGRGKGGKVKGKAK------------SRSNRAGLQFPVGRIHRLLRKGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_DROER (Histone H2A OS=Drosophila erecta GN=His2A PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.547e-16 Identity = 51/91 (56.04%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 94 MSGKGAKGLIMGXXXXXXXXXXXXXPISRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 MSG+G G + G SRS+RAGLQFPVGRIHRLL+ A RVGA A VY AA++EYL AEVLELAGNA++D K RI Sbjct: 1 MSGRGKGGKVKGKAK------------SRSNRAGLQFPVGRIHRLLRKGNYAE-RVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKTRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AX_MOUSE (Histone H2A.x OS=Mus musculus GN=H2afx PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.547e-16 Identity = 46/64 (71.88%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGR+HRLL+ A RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGHYAE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AX_HUMAN (Histone H2A.x OS=Homo sapiens GN=H2AFX PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.547e-16 Identity = 46/64 (71.88%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGR+HRLL+ A RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGHYAE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A4_PSAMI (Late histone H2A.2.2 OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.547e-16 Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGR+HR L+ A+ RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 16 SRSSRAGLQFPVGRVHRFLRKGNYAN-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRI 78
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A_ONCMY (Histone H2A OS=Oncorhynchus mykiss PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSSRAGLQFPVGR+HRLL+ A RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 TRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2AX_DANRE (Histone H2A.x OS=Danio rerio GN=h2afx PE=2 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 +RSSRAGLQFPVGR+HRLL+ A RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 TRSSRAGLQFPVGRVHRLLRKGNYAE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A3_RAT (Histone H2A type 3 OS=Rattus norvegicus PE=2 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGR+HRLL+ + RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A3_MOUSE (Histone H2A type 3 OS=Mus musculus GN=Hist3h2a PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGR+HRLL+ + RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79
BLAST of CN185551 vs. ExPASy Swiss-Prot
Match: H2A3_HUMAN (Histone H2A type 3 OS=Homo sapiens GN=HIST3H2A PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 2.021e-16 Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 175 SRSSRAGLQFPVGRIHRLLKSRTTAHGRVGATAAVYSAAILEYLTAEVLELAGNASKDLKVKRI 366 SRSSRAGLQFPVGR+HRLL+ + RVGA A VY AA+LEYLTAE+LELAGNA++D K RI Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYSE-RVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRI 79 The following BLAST results are available for this feature:
BLAST of CN185551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 233
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185551 ID=CN185551; Name=CN185551; organism=Citrus sinensis; type=EST; length=366bpback to top |