DC887897
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH602_SYNFM (60 kDa chaperonin 2 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=groL2 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.855e-17 Identity = 53/115 (46.09%), Postives = 71/115 (61.74%), Query Frame = -1 Query: 227 ETLD-NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVE---IKEPEPAMPAGNPMD 559 E LD + E+ G IV RAL P++ IA NAG GSVV ++V +G+NA T YEDL AAG+IDPTKVVR L++A+SVA L ++ ++ E ++P PAMP D Sbjct: 427 EKLDLHGEDAFGVKIVMRALEEPVRQIANNAGHEGSVVVQQVKQGTG-SHGFNADTEVYEDLSAAGVIDPTKVVRFALQNAASVASLLLTTEAMIAEKPKKQKPAPAMPGAGMED 540
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH602_SALTO (60 kDa chaperonin 2 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=groL2 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.855e-17 Identity = 51/102 (50.00%), Postives = 70/102 (68.63%), Query Frame = -1 Query: 251 LDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVE-IKEPEPA 553 LD DE KVG IV++AL PL+ IA+NAG +G VV +KV+ D +G +AATG Y DL AGI+DP KV R + +A+S+A L ++ +VV+ +EPEPA Sbjct: 430 LDGDE-KVGVSIVRKALVEPLRWIAQNAGHDGYVVVQKVVDKD-WGHGLDAATGEYVDLAKAGILDPVKVTRNAVANAASIAGLLLTTESLVVDKPQEPEPA 529
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH601_VIBPA (60 kDa chaperonin 1 OS=Vibrio parahaemolyticus GN=groL1 PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 8.855e-17 Identity = 47/112 (41.96%), Postives = 68/112 (60.71%), Query Frame = -1 Query: 218 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPA-MPAGNPMDNSG 550 DN+E+ VG + RA+ P++ I KNAG SVV+ V + + YGYNAATG Y D++ GI+DPTKV R L+ A+SVA + ++ +V ++ + E A MP M G Sbjct: 432 DNEEQNVGIRVALRAMEAPIRQITKNAGDEDSVVANNVKAGEG-SYGYNAATGEYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQKESAGMPDMGGMGGMG 542
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH60_PSEAE (60 kDa chaperonin OS=Pseudomonas aeruginosa GN=groL PE=1 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 1.156e-16 Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = -1 Query: 212 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 550 DN+E+ VG +++RA+ PL+ I NAG SVV +KV + YG+NAATG Y D++ GI+DP KV R L+ A+S+ + ++ +V EI E +PAM G D G G Sbjct: 432 DNEEQNVGIALLRRAVESPLRQIVANAGDEPSVVVDKVKQGSGN-YGFNAATGVYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVAEIVEDKPAM--GGMPDMGGMG 541
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH60_PSEAB (60 kDa chaperonin OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=groL PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.156e-16 Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = -1 Query: 212 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 550 DN+E+ VG +++RA+ PL+ I NAG SVV +KV + YG+NAATG Y D++ GI+DP KV R L+ A+S+ + ++ +V EI E +PAM G D G G Sbjct: 432 DNEEQNVGIALLRRAVESPLRQIVANAGDEPSVVVDKVKQGSGN-YGFNAATGVYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVAEIVEDKPAM--GGMPDMGGMG 541
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH60_PSEA8 (60 kDa chaperonin OS=Pseudomonas aeruginosa (strain LESB58) GN=groL PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.156e-16 Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = -1 Query: 212 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 550 DN+E+ VG +++RA+ PL+ I NAG SVV +KV + YG+NAATG Y D++ GI+DP KV R L+ A+S+ + ++ +V EI E +PAM G D G G Sbjct: 432 DNEEQNVGIALLRRAVESPLRQIVANAGDEPSVVVDKVKQGSGN-YGFNAATGVYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVAEIVEDKPAM--GGMPDMGGMG 541
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH60_PSEA7 (60 kDa chaperonin OS=Pseudomonas aeruginosa (strain PA7) GN=groL PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.156e-16 Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = -1 Query: 212 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 550 DN+E+ VG +++RA+ PL+ I NAG SVV +KV + YG+NAATG Y D++ GI+DP KV R L+ A+S+ + ++ +V EI E +PAM G D G G Sbjct: 432 DNEEQNVGIALLRRAVEAPLRQIVANAGDEPSVVVDKVKQGSGN-YGFNAATGVYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVAEIVEDKPAM--GGMPDMGGMG 541
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH60_PHOPR (60 kDa chaperonin OS=Photobacterium profundum GN=groL PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.156e-16 Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = -1 Query: 212 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 550 DN+E+ VG + RA+ PL+ I KNAG SVV+ V + + + YGYNAATG Y D++A GI+DPTKV R L+ A+SVA + ++ ++ ++ PA A D G G Sbjct: 434 DNEEQNVGIRVALRAMESPLRQIVKNAGDEDSVVANNVRAGEGN-YGYNAATGVYGDMIAMGILDPTKVTRSALQFAASVAGLMITTEAMITDM----PAKDASAMPDMGGMG 541
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH60_PETMO (60 kDa chaperonin OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=groL PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.156e-16 Identity = 44/107 (41.12%), Postives = 69/107 (64.49%), Query Frame = -1 Query: 242 TLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPE--PAMPA 556 TL DE K+GA +V ++L P+K I +NAG+ +++ EK++ D+ KYGY+ Y ++ +GIIDPTKV R L++A+S+A L ++ +V E + E P MPA Sbjct: 430 TLSGDE-KIGAQLVAKSLDAPVKQIIRNAGLEPAIIIEKIIEKDDSKYGYDVLKERYVNMFESGIIDPTKVTRSALQNAASIASMLLTTEVLVAEEPKEEKGPEMPA 535
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH60_LACLS (60 kDa chaperonin OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=groL PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.156e-16 Identity = 49/105 (46.67%), Postives = 69/105 (65.71%), Query Frame = -1 Query: 221 KVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNS 535 + G +IV+RAL P++ IA NAG GSV+ +K L S+ G+NAATG + +++ GI+DP KV R L++A+SVA L ++ VV +PEPA PA PMD S Sbjct: 434 QTGINIVRRALEEPVRQIAANAGYEGSVIIDK-LRSEKVGTGFNAATGQWVNMIEEGIVDPAKVTRSALQNAASVAGLILTTEAVVA--NKPEPAAPAMPPMDPS 535 The following BLAST results are available for this feature:
BLAST of DC887897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887897 ID=DC887897; Name=DC887897; organism=Citrus sinensis; type=EST; length=565bpback to top |