DC887897
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH602_BRAJA (60 kDa chaperonin 2 OS=Bradyrhizobium japonicum GN=groL2 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.011e-20 Identity = 48/112 (42.86%), Postives = 73/112 (65.18%), Query Frame = -1 Query: 212 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 547 ND++K G +IV++AL YP + IA NAG +GSV+ K+L D + YGY++ TG Y +L++ GIIDPTKVVR +++A+SVA + ++ +V E+ + G P G G Sbjct: 433 NDDQKTGVEIVRKALSYPARQIAINAGEDGSVIVGKILEKDQYSYGYDSQTGEYGNLVSKGIIDPTKVVRVAIQNAASVAALLITTEAMVAEVPKKNTG-AGGMPPGGGGMG 543
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH601_RHIEC (60 kDa chaperonin 1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL1 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.011e-20 Identity = 49/104 (47.12%), Postives = 69/104 (66.35%), Query Frame = -1 Query: 239 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAG 547 ND+++ G +IV+RAL P + IA+NAG S+V K+L D YGYNA TG Y D++ GIIDP KVVR L+ A+SVA + ++ ++ E+ K+ PAMP G Sbjct: 432 NDDQEAGINIVRRALQAPARQIAENAGDEASIVVGKILDKDQDNYGYNAQTGEYGDMIGMGIIDPVKVVRTALQDAASVASLLITTEAMIAELPKKDAPAMPGG 535
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH60_CHLP8 (60 kDa chaperonin OS=Chlorobaculum parvum (strain NCIB 8327) GN=groL PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.320e-20 Identity = 53/118 (44.92%), Postives = 75/118 (63.56%), Query Frame = -1 Query: 212 KETLDNDEEKVGADIVKRALCYPLKLIAKNAGV-NGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 562 + T DND++K G DI++RAL PL+ I N G +G+VV EKV S + YG+NA T YE+L+ AG++DPTKV R LE+A+SVA L ++ + ++ E + MPA P G G Sbjct: 428 RATADNDDQKTGIDIIRRALEEPLRQIVANTGTTDGAVVLEKVRSGEGD-YGFNARTEEYENLVDAGVVDPTKVTRSALENAASVASILLTTEAAITDLPEDKADMPAMPPGGMGGMG 544
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH602_SPHAL (60 kDa chaperonin 2 OS=Sphingopyxis alaskensis GN=groL2 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.320e-20 Identity = 48/101 (47.52%), Postives = 71/101 (70.30%), Query Frame = -1 Query: 245 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 547 ND+++ G DIV+RAL P + IA NAG +G+ + K+L S ++ +G+NAATG YEDL+ AG+IDP KVVR L+ A+SVA + ++ +V E+ + E A P Sbjct: 433 NDDQQSGIDIVRRALRAPARQIADNAGEDGAWIVGKLLESSDYNWGFNAATGEYEDLVKAGVIDPAKVVRTALQDAASVAALLITTEALVAELPKEEKAAP 533
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH602_PROMP (60 kDa chaperonin 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groL2 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.320e-20 Identity = 54/122 (44.26%), Postives = 80/122 (65.57%), Query Frame = -1 Query: 209 IKETLD---NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 565 +KE D + EE +GA+IV+ +L PL IA+NAG NG+V++E V S + G+NAATG+Y D+ AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG P + Y Sbjct: 424 LKEWADKALSGEELIGANIVEASLTSPLMRIAENAGSNGAVIAENVKSKPFND-GFNAATGDYVDMSAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDAAPAGAPGMGGDFDY 544
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH60_RUBXD (60 kDa chaperonin OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=groL PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.724e-20 Identity = 53/107 (49.53%), Postives = 74/107 (69.16%), Query Frame = -1 Query: 239 ETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 559 + LD DE + GA IV RAL P++ IA+NAG +GS+V +KV + + G+NA TG YEDL+AAG+IDP V R L++A+S+A + +D VV E +E +PAMP G Sbjct: 430 DELDGDE-RTGARIVYRALEEPIRQIAENAGADGSIVVDKVRAQGD-SIGFNALTGGYEDLVAAGVIDPAMVTRSALQNAASIAGLLVTTDVVVAEPEEEQPAMPGG 534
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH60_BACFO (60 kDa chaperonin OS=Bacteroides forsythus GN=groL PE=1 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 1.724e-20 Identity = 52/111 (46.85%), Postives = 69/111 (62.16%), Query Frame = -1 Query: 218 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 550 +N++E G +IVKRA+ PL+ I NAG G+VV +KV +GYNA T YEDL AG++DP KV R LE+A+S+A FL ++CVV + KE PA P M G Sbjct: 432 ENEDETTGIEIVKRAIEEPLRQIVNNAGKEGAVVVQKVKEGTG-AFGYNARTDVYEDLSEAGVVDPAKVTRIALENAASIAGMFLTTECVVADKKEEAPAPPMNPGMGGMG 541
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH602_ERYLH (60 kDa chaperonin 2 OS=Erythrobacter litoralis (strain HTCC2594) GN=groL2 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.724e-20 Identity = 50/113 (44.25%), Postives = 72/113 (63.72%), Query Frame = -1 Query: 212 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 550 +ND++ G DIV++A+ P++ IA NAG +G+V+S +L DN G+NAAT YEDL+ AG+IDPTKVVR L+ A+SVA + ++ + E+ PE G D G G Sbjct: 432 ENDDQTRGIDIVRKAIVAPVRQIATNAGHDGAVISGNLLREDNESQGFNAATDTYEDLVKAGVIDPTKVVRVALQDAASVAGLLITTEAAISEV--PEDKSSGGGMPDMGGMG 542
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH602_AZOC5 (60 kDa chaperonin 2 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=groL2 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.724e-20 Identity = 48/108 (44.44%), Postives = 74/108 (68.52%), Query Frame = -1 Query: 239 LDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKE---PEPAMPAG 553 ++N ++K G DIV+RA+ P + I NAG +GSVV K+L ++ + +GYNA TG Y D++A+GIIDP KVVR L+ A+S++ + ++ +VVE+ + PAMP G Sbjct: 431 VENTDQKTGIDIVRRAIQAPARQIVANAGDDGSVVVGKILENETYTFGYNAQTGEYVDMVASGIIDPAKVVRTALQDAASISALIITTEALVVELPKKAAAAPAMPGG 538
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH601_SYNY3 (60 kDa chaperonin 1 OS=Synechocystis sp. (strain PCC 6803) GN=groL1 PE=1 SV=4) HSP 1 Score: 98.9821 bits (245), Expect = 1.724e-20 Identity = 56/110 (50.91%), Postives = 74/110 (67.27%), Query Frame = -1 Query: 215 DEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGY 544 DEE GA IV RAL PLK IA+NAG NG+V+SE+V + GYNAA+ Y D++AAGI+DP KV R L++A+S+A L ++C+VV+ E E A PAG P + Y Sbjct: 434 DEELTGALIVARALPAPLKRIAENAGQNGAVISERVKEKE-FNVGYNAASLEYVDMLAAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEKEKA-PAGAPGGDFDY 541 The following BLAST results are available for this feature:
BLAST of DC887897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887897 ID=DC887897; Name=DC887897; organism=Citrus sinensis; type=EST; length=565bpback to top |