CN185423

Overview
NameCN185423
Unique NameCN185423
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.224e-12
Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 2
Query:  269 LDLGNSNLSGRLVPEL-GKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKS---LVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            L+LGN+ LSG  +  +  KL  +  L L  NNI G++P+ L N  +L  LDL +N  +G++P     L+S   L  L + +N L+G +P EL    SLK +D+S N L G IP
Sbjct:  331 LNLGNNKLSGDFLSTVVSKLSRITNLYLPFNNISGSVPISLTNCSNLRVLDLSSNEFTGEVPSGFCSLQSSSVLEKLLIANNYLSGTVPVELGKCKSLKTIDLSFNALTGLIP 443          

HSP 2 Score: 72.7886 bits (177), Expect = 1.598e-12
Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 2
Query:  242 CNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSL 550
            C     +  L L N+ L+G L   + K  ++ ++ L  N + G IPV +G L+ L  L L NN+++G IP  L   K+L++L LN N LTG +P EL   + L
Sbjct:  471 CVDGGNLETLILNNNLLTGSLPESISKCTNMLWISLSSNLLTGEIPVGIGKLEKLAILQLGNNSLTGNIPSELGNCKNLIWLDLNSNNLTGNLPGELASQAGL 573          

HSP 3 Score: 68.5514 bits (166), Expect = 3.014e-11
Identity = 39/114 (34.21%), Postives = 69/114 (60.53%), Query Frame = 2
Query:  269 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIP----VELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPT 598
            +DL  + L+G +  E+  L  L  L ++ NN+ G IP    V+ GNL++LI   L NN ++G +P S++K  +++++ L+ N LTG+IP  +  +  L ++ + +N L G IP+
Sbjct:  431 IDLSFNALTGLIPKEIWTLPKLSDLVMWANNLTGGIPESICVDGGNLETLI---LNNNLLTGSLPESISKCTNMLWISLSSNLLTGEIPVGIGKLEKLAILQLGNNSLTGNIPS 541          

HSP 4 Score: 67.3958 bits (163), Expect = 6.715e-11
Identity = 41/114 (35.96%), Postives = 67/114 (58.77%), Query Frame = 2
Query:  266 RLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSL----AKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            +L + N+ LSG +  ELGK + L+ ++L  N + G IP E+  L  L  L ++ NN++G IP S+      L++L+   LN+N LTG +P  +   +++  + +SSN L G IP
Sbjct:  406 KLLIANNYLSGTVPVELGKCKSLKTIDLSFNALTGLIPKEIWTLPKLSDLVMWANNLTGGIPESICVDGGNLETLI---LNNNLLTGSLPESISKCTNMLWISLSSNLLTGEIP 516          
BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.598e-12
Identity = 47/127 (37.01%), Postives = 68/127 (53.54%), Query Frame = 2
Query:  218 PCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPT 598
            P ++ ++T   + R+  +  GNS+L       +  ++ L  L L  NN+ GTIP  +G   SL  LDL  N + G IP SL  L+ L  L L +N L G +P +     SL  VDVS NDL G++P+
Sbjct:  259 PASFSNLTSLTELRLGDISNGNSSLEF-----IKDMKSLSILVLRNNNLTGTIPSNIGEYSSLRQLDLSFNKLHGTIPASLFNLRQLTHLFLGNNTLNGSLPTQKG--QSLSNVDVSYNDLSGSLPS 378          
BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: Y5720_ARATH (Probable inactive receptor kinase At5g67200 OS=Arabidopsis thaliana GN=At5g67200 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.087e-12
Identity = 49/147 (33.33%), Postives = 74/147 (50.34%), Query Frame = 2
Query:  161 RSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNRVTRLDLGNSNLSGRLVPE-LGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPT 598
            +S +D DN L        + C W  + C Q  R+ RL L    L G      L +L+ L+ L L  N++ G IP +L +L +L SL L  N  SG  PPS+  L  L+ L ++ N  +G IP E+  +  L  +++  N   GT+P+
Sbjct:   42 KSTADLDNKLLYSLTERYDYCQWRGVKCAQ-GRIVRLVLSGVGLRGYFSSATLSRLDQLRVLSLENNSLFGPIP-DLSHLVNLKSLFLSRNQFSGAFPPSILSLHRLMILSISHNNFSGSIPSEINALDRLTSLNLDFNRFNGTLPS 186          
BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.087e-12
Identity = 41/111 (36.94%), Postives = 65/111 (58.56%), Query Frame = 2
Query:  269 LDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 601
            L +  + LSG   P+LG++  L  + +  N   G +P  LGNL+SL  L + +NNI+G+IP SL+ LK+L   R++ N L+G+IP  +   + L  +D+    + G IP S
Sbjct:  140 LAVTGNRLSGPFPPQLGQITTLTDVIMESNLFTGQLPPNLGNLRSLKRLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIPDFIGNWTRLVRLDLQGTSMEGPIPAS 250          

HSP 2 Score: 70.4774 bits (171), Expect = 7.932e-12
Identity = 42/136 (30.88%), Postives = 65/136 (47.79%), Query Frame = 2
Query:  257 RVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPV-----------------------ELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            RVT + L   NL G + PE G L  L  ++L  N + GTIP                        +LG + +L  + + +N  +G++PP+L  L+SL  L ++ N +TG+IP  L  + +L    +  N L G IP
Sbjct:   89 RVTNIQLRGFNLRGIIPPEFGNLTRLTEIDLVLNFLSGTIPTTLSQIPLEILAVTGNRLSGPFPPQLGQITTLTDVIMESNLFTGQLPPNLGNLRSLKRLLISSNNITGRIPESLSNLKNLTNFRIDGNSLSGKIP 224          
BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: Y5815_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 OS=Arabidopsis thaliana GN=At5g58150 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.726e-12
Identity = 44/119 (36.97%), Postives = 69/119 (57.98%), Query Frame = 2
Query:  239 TCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            T  + +++  LDL  + ++  L  +L  L  L+ L L  N I   +P  +GN  SL +LDL  N+ISGKIP +++ L +L  L+L++N     +P ELV   SL  +D+SSN L  ++P
Sbjct:   85 TIGKMSKLQTLDLSGNKITS-LPSDLWSLSLLESLNLSSNRISEPLPSNIGNFMSLHTLDLSFNSISGKIPAAISNLVNLTTLKLHNNDFQFGVPPELVHCRSLLSIDLSSNRLNESLP 202          
BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.726e-12
Identity = 44/126 (34.92%), Postives = 61/126 (48.41%), Query Frame = 2
Query:  218 PCTWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            PCTW  + C +  RVT L L    LSG L   +G L  L+ L    N + G +P +  NL  L  L L  N  SG+IP  L  L +++ + L  N   G+IP  +   + L  + +  N L G IP
Sbjct:   52 PCTWGGVQC-ESGRVTALRLPGVGLSGPLPIAIGNLTKLETLSFRFNALNGPLPPDFANLTLLRYLYLQGNAFSGEIPSFLFTLPNIIRINLAQNNFLGRIPDNVNSATRLATLYLQDNQLTGPIP 176          
BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: Y5020_ARATH (Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana GN=At5g10020 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.560e-12
Identity = 51/168 (30.36%), Postives = 74/168 (44.05%), Query Frame = 2
Query:  164 SLSDPDNVLQSWDPTLVNPCTWFHITCNQDNR----------------VTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTSGPFEHI 619
            SL+DP      W     +P T   I  N D R                +  L L  ++ SGR+VP LG +  LQ+L+L  N   G IP  +  L SL  L+L +N   G  P     L+ L  L L+ N + G +      + +++ VD+S N   G +  S P E+I
Sbjct:   53 SLTDPSTCPNDWPGISCDPETGSIIAINLDRRGLSGELKFSTLSGLTRLRNLSLSGNSFSGRVVPSLGGISSLQHLDLSDNGFYGPIPGRISELWSLNHLNLSSNKFEGGFPSGFRNLQQLRSLDLHKNEIWGDVGEIFTELKNVEFVDLSCNRFNGGL--SLPMENI 218          

HSP 2 Score: 68.9366 bits (167), Expect = 2.308e-11
Identity = 41/118 (34.75%), Postives = 66/118 (55.93%), Query Frame = 2
Query:  269 LDLGNSNLSGRL---------VPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            L+L  +NL G +         +  L     ++ L+L  N++ G +P ++G ++ +  L+L NN +SG++P  L KL  L+FL L++N   GQIP +L   S +   +VS NDL G IP
Sbjct:  440 LNLSRNNLEGPIPFRGSRASELLVLNSYPQMELLDLSTNSLTGMLPGDIGTMEKIKVLNLANNKLSGELPSDLNKLSGLLFLDLSNNTFKGQIPNKLP--SQMVGFNVSYNDLSGIIP 555          
BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.560e-12
Identity = 45/119 (37.82%), Postives = 65/119 (54.62%), Query Frame = 2
Query:  239 TCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            T  + +++  LDL N+ +S  L  +   L  L+ L L  N I G+    +GN   L  LD+  NN SG IP ++  L SL  L+L+ N     IPR L+G  SL  +D+SSN L G++P
Sbjct:   87 TIGKLSKLQSLDLSNNKISA-LPSDFWSLNTLKNLNLSFNKISGSFSSNVGNFGQLELLDISYNNFSGAIPEAVDSLVSLRVLKLDHNGFQMSIPRGLLGCQSLVSIDLSSNQLEGSLP 204          
BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.650e-12
Identity = 52/158 (32.91%), Postives = 79/158 (50.00%), Query Frame = 2
Query:  128 NSEGDALYALRRSLSDPDNVLQSWDPTLVNPCTWFHITCNQDNR-VTRLDLGNSNLSGRLVPE-LGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIP 595
            NS+  AL A   S+  P     +W+ T     +W  +TC  D   V  L L    L G + P  LGKLE L+ L L  N + G +P ++ +L SL  + L +NN SG++P  ++  + L  L L+ N  TG+IP     +  L  + + +N L G +P
Sbjct:   46 NSDRQALLAFAASV--PHLRRLNWNSTNHICKSWVGVTCTSDGTSVHALRLPGIGLLGPIPPNTLGKLESLRILSLRSNLLSGNLPPDIHSLPSLDYIYLQHNNFSGEVPSFVS--RQLNILDLSFNSFTGKIPATFQNLKQLTGLSLQNNKLSGPVP 199          
BLAST of CN185423 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.650e-12
Identity = 51/155 (32.90%), Postives = 78/155 (50.32%), Query Frame = 2
Query:  143 ALYALRRSLSDPDNVLQSWDPTLVNPC--TWFHITCNQDNRVTRLDLGNSNLSGRLVPELGKLEHLQYLELYKNNIQGTIPVELGNLKSLISLDLYNNNISGKIPPSLAKLKSLVFLRLNDNRLTGQIPRELVGISSLKVVDVSSNDLCGTIPTS 601
            A+  L  +L  P  VL  W  +  +PC   W  I CN  + ++ + +  +NL G L   L K   ++ ++   N I G+IP  L    +L    L  N  +G IP SL  L  L  + LNDN L+G++P     +  L  +D+SSN++ GT+P S
Sbjct:   38 AINGLFAALGAP--VLPGWIASGGDPCGEAWQGIICNVSDIIS-ITVNAANLQGELGDNLAKFTSIRGIDFSNNRIGGSIPSTLP--VTLQHFFLSANQFTGSIPESLGTLSFLNDMSLNDNLLSGELPDVFQNLVGLINLDISSNNISGTLPPS 187          
The following BLAST results are available for this feature:
BLAST of CN185423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
BRL3_ARATH1.224e-1239.82Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y5614_ARATH1.598e-1237.01Probable LRR receptor-like serine/threonine-protei... [more]
Y5720_ARATH2.087e-1233.33Probable inactive receptor kinase At5g67200 OS=Ara... [more]
Y5344_ARATH2.087e-1236.94Probable LRR receptor-like serine/threonine-protei... [more]
Y5815_ARATH2.726e-1236.97Probably inactive leucine-rich repeat receptor-lik... [more]
Y5659_ARATH2.726e-1234.92Probable inactive receptor kinase At5g16590 OS=Ara... [more]
Y5020_ARATH3.560e-1230.36Probable inactive receptor kinase At5g10020 OS=Ara... [more]
Y2242_ARATH3.560e-1237.82Probable LRR receptor-like serine/threonine-protei... [more]
Y5830_ARATH4.650e-1232.91Probable inactive receptor kinase At5g58300 OS=Ara... [more]
SRF3_ARATH4.650e-1232.90Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001F01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185423 ID=CN185423; Name=CN185423; organism=Citrus sinensis; type=EST; length=623bp
GAGAGCCATGGCGGCGGCGGCGGCGGCGGCGGAAGCGGCAGTGCAGTGGT
TGAGTGTGTGTATAACGTTCAGCATAAGCCTAATAATAATAATAGGGAGC
AGCAGCTTGGTGGCGGTGGCGAGTGGAAACTCGGAAGGGGACGCGCTGTA
CGCGCTCAGGAGAAGCTTATCAGATCCCGATAACGTGCTTCAGAGCTGGG
ATCCAACTCTCGTCAATCCCTGCACTTGGTTTCACATAACCTGTAATCAG
GACAACCGCGTTACTCGACTGGATTTGGGTAATTCAAATCTATCCGGCCG
TCTCGTCCCTGAACTGGGCAAGCTCGAGCATTTGCAATACCTGGAACTTT
ACAAAAACAACATCCAAGGAACTATCCCTGTCGAGCTCGGTAACTTGAAG
AGCCTCATCAGCTTGGACTTGTATAATAACAACATCTCGGGGAAAATCCC
TCCTTCCTTGGCTAAATTGAAATCTCTTGTTTTTTTGCGGCTTAACGATA
ATCGGCTAACTGGACAAATTCCCAGGGAACTTGTTGGAATTTCAAGTCTC
AAAGTTGTGGATGTTTCAAGCAATGATCTGTGTGGAACAATTCCTACAAG
CGGACCATTTGAACACATCCCAC
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