CN185353
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACADL_RAT (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadl PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.371e-25 Identity = 63/202 (31.19%), Postives = 115/202 (56.93%), Query Frame = 2 Query: 155 FKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGS--KGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 F+ESV +F +E + P + +++ ++ LW+ G L GI ++ + EE S G + HS++ + + +G+ Q ++++P++ +G+ +GA+AM+EP AGSD+ G++ A R +I+NG+K++ TNG ++ ++V A T+ +A S GI+ F++E GM GF +KL K+GM+ DT Sbjct: 60 FRESVRKFFQEEVIPYHEEWEKAGEVSRE--LWEKAGKQGLLGINIAEKHGGIGGDLLSTAVTWEE-QAYSNCTGPGFSLHSDIVMPYIANYGTKEQIEQFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKRSGSDWILNGSKVFITNGWLSDLVIVVAVTNREARSPAHGISLFLVENGMKGFIKGKKLHKMGMKAQDT 258
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACADL_HUMAN (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADL PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.371e-25 Identity = 62/202 (30.69%), Postives = 116/202 (57.43%), Query Frame = 2 Query: 155 FKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGS--KGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 F++SV +F +E + P ++ +++ ++V W+ G L G+ + I EE + ++ S G + HS + ++ + HGS Q ++P++ +G+ +GA+AM+EP AGSD+ G+K A + +I+NG+K++ +NG ++ ++V A T+ +A S GI+ F++E GM GF +KL K+G++ DT Sbjct: 60 FRKSVRKFFQEEVIPHHSEWEKAGEVSREV--WEKAGKQGLLGVNIAEHLGGIGGDLYSAAIVWEEQAYSNCS-GPGFSIHSGIVMSYITNHGSEEQIKHFIPQMTAGKCIGAIAMTEPGAGSDLQGIKTNAKKDGSDWILNGSKVFISNGSLSDVVIVVAVTNHEAPSPAHGISLFLVENGMKGFIKGRKLHKMGLKAQDT 258
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACADL_PIG (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa GN=ACADL PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.097e-25 Identity = 64/202 (31.68%), Postives = 113/202 (55.94%), Query Frame = 2 Query: 155 FKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGS--KGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 F+ESV +F +E + P A+ +++ ++ LW+ G L GI + I EE S G + HS++ + + +GS Q ++P++ +G+ +GA+AM+EP AGSD+ G++ A + +I+NG+K++ TNG ++ ++V A T+ +A S GI+ F++E GM GF +KL K+G++ DT Sbjct: 60 FRESVRKFFQEEVIPHHAEWEKAGEVSRE--LWEKAGKQGLLGINIAERHGGIGGDLYSAAIVWEE-QAYSNCTGPGFSLHSDIVMPYIANYGSEEQIKHFIPQMTAGKCIGAIAMTEPGAGSDLQGVRTNAKKDGSDWILNGSKVFITNGWLSDVVIVVAVTNREARSPAHGISLFLVENGMKGFVKGRKLHKIGLKAQDT 258
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACADL_MACFA (Long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=ACADL PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.220e-23 Identity = 58/202 (28.71%), Postives = 116/202 (57.43%), Query Frame = 2 Query: 155 FKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGS--KGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 F++S+ +F +E + P ++ +++ ++V W+ G L G+ + + EE + ++ S G + HS + ++ + +GS Q ++P++ +G+ +GA+AM+E AGSD+ G+K A + +I+NG+K++ +NG ++ ++V A T+ +A S +GI+ F++E GM GF +KL K+G++ DT Sbjct: 60 FRKSIRKFFQEEVIPHHSEWEKAGEVSREV--WEKAGKQGLLGVNIAEHLGGIGGDLYYAAVVWEEQAYSNCS-GPGFSVHSGIVMSYITNYGSEEQIKHFIPQMTAGKCIGAIAMTELGAGSDLQGIKTNAKKDGSDWILNGSKVFISNGWLSDVVIVVAVTNHEAPSPARGISLFLVENGMKGFIKGRKLHKMGLKAQDT 258
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACDP_MYCLE (Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium leprae GN=fadE25 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.458e-23 Identity = 69/201 (34.33%), Postives = 98/201 (48.76%), Query Frame = 2 Query: 152 QFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 + + ++ A + IAP AA +DQ FP++ FN I P+E CI +EE++R S L A + L L+ GS K + LP L + + + A+SE AGSD M+ +A +I+NG K W TNG + V A TD G+ GI+AFI+ K GFS K KLG++GS T Sbjct: 21 ELRATIRALAEKEIAPHAADVDQRARFPEEALAALNASGFN--AIHVPEEYGGQGADSVAACIVIEEVARVDASASL-IPAVNKLGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAGSDAASMRTRAKADGDDWILNGFKCWITNGGKSTWYTVMAVTDPDKGANGISAFIVHKDDEGFSIGPKEKKLGIKGSPT 218
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACADM_PANTR (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Pan troglodytes GN=ACADM PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.879e-22 Identity = 75/229 (32.75%), Postives = 109/229 (47.60%), Query Frame = 2 Query: 86 TKKKKHSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD---IKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 TK + S F + Q +F+ + +FARE I P AA+ D++ +P + W+L G N H P+ C+ EE+ A G G+ N L ++ G+ QK KYL ++ + A ++EP AGSDV G+K KA++ YIING KMW TNG A + A++D +K T FI+E PG +K +G R SDT Sbjct: 25 TKANRQREPGLGFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWEL-GLMNTH---IPENCGGLGLGTFDACLISEEL--AYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDT 247
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACADM_MACFA (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=ACADM PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.879e-22 Identity = 74/216 (34.26%), Postives = 106/216 (49.07%), Query Frame = 2 Query: 125 SLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD---IKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 S F + Q +F+ + +FARE I P AA+ D++ +P + W+L G N H PQ C+ EE+ A G G+ N L ++ G+ QK KYL ++ + A ++EP AGSDV G+K KA++ YIING KMW TNG A + A++D +K T FI+E PG +K +G R SDT Sbjct: 38 SFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWEL-GLMNPH---IPQNCGGLGLGTFDACLISEEL--AYGCTGVQTAIEGNSLGQMPIIIAGNEQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKASWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDT 247
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACADM_HUMAN (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADM PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.879e-22 Identity = 75/229 (32.75%), Postives = 109/229 (47.60%), Query Frame = 2 Query: 86 TKKKKHSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD---IKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 TK + S F + Q +F+ + +FARE I P AA+ D++ +P + W+L G N H P+ C+ EE+ A G G+ N L ++ G+ QK KYL ++ + A ++EP AGSDV G+K KA++ YIING KMW TNG A + A++D +K T FI+E PG +K +G R SDT Sbjct: 25 TKANRQREPGLGFSFEFTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWEL-GLMNTH---IPENCGGLGLGTFDACLISEEL--AYGCTGVQTAIEGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDT 247
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: GCDH_DICDI (Glutaryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=gcdh PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.454e-22 Identity = 65/213 (30.52%), Postives = 105/213 (49.30%), Query Frame = 2 Query: 119 STSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVD-GGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 S L + ++ ++ V +F ++ + PR + F +++ + G + G T P A+E++ S + S+L ++ + G+ AQK KYL L SG+ VG ++EPNAGSD GM+ +A + G Y++NG K W TN P+A VV+AK + + I F++EKGM G S + KL +R S T Sbjct: 44 SLESLLTEEEVMIRDQVNKFCQDELMPRIQMAYRDEKFDREI--MREYGKMGMLGATIPAYGGVSHVAYGLMANAVEKVDSGYRS---AMSVQSSLVMHPINTFGTDAQKSKYLDGLASGDLVGCFGLTEPNAGSDPAGMQTRAVKNSAGNYVLNGTKTWITNSPIADVFVVWAKVE----NGDIRGFVLEKGMKGLSAPKIEGKLSLRASIT 247
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACDP_MYCTU (Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium tuberculosis GN=fadE25 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.205e-22 Identity = 65/201 (32.34%), Postives = 100/201 (49.75%), Query Frame = 2 Query: 152 QFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 + + ++ A + IAP AA++D+ FP++ + FN + P+E CI +EE++R S L A + L L+ GS K + LP L + + + A+SE AGSD M+ +A +I+NG K W TNG + V A TD G+ GI+AF++ K GF+ K KLG++GS T Sbjct: 21 EMRSAIRALAEKEIAPHAAEVDEKARFPEEALVALNSSGFN--AVHIPEEYGGQGADSVATCIVIEEVARVDASASL-IPAVNKLGTMGLILRGSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRGANGISAFMVHKDDEGFTVGPKERKLGIKGSPT 218 The following BLAST results are available for this feature:
BLAST of CN185353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185353 ID=CN185353; Name=CN185353; organism=Citrus sinensis; type=EST; length=757bpback to top |