CN185353
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACAD8_BOVIN (Isobutyryl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACAD8 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.432e-16 Identity = 57/210 (27.14%), Postives = 91/210 (43.33%), Query Frame = 2 Query: 125 SLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 S+ + Q +F++ FA +AP A+ DQ FP D + G+ + I E ++ S H N+C+ + R GS Q+ + P L + E + ++EP +GSD + A R YI+NG+K + + G A VV +T G +GI+ ++EKG PG S +K K+G T Sbjct: 39 SMGLSEEQKEFQKVAFNFAAREMAPHMAEWDQKELFPVDT--MRKAAQLGFGGVYVQTDVGGAGLSRLDTSIIFEALATGCTSTTAYMSIH-NMCVWIIDRFGSEEQRHRLCPPLCTMEKFASYCLTEPGSGSDAASLMTSAVRQHDHYILNGSKAFISGGGEADIYVVMCRTG-GPGPRGISCVVVEKGTPGLSFGKKEKKVGWNSQPT 244
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: GCDH_PIG (Glutaryl-CoA dehydrogenase, mitochondrial (Fragment) OS=Sus scrofa GN=GCDH PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.225e-15 Identity = 57/206 (27.67%), Postives = 98/206 (47.57%), Query Frame = 2 Query: 146 QLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKD-KYLPKLISGEHVGALAMSEPNAGSDVVGMKCKA--DRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 ++ +++ + +E++ PR +++ F +++ MG + G T +A E+ R + S+L ++ + +GS Q+ KYLP+L GE +G ++EPN GSD M+ +A + + Y +NG K W TN PVA VV+A+ + I F++EKGM G S + K +R S T Sbjct: 33 EILIRDTFRTYCQEHLMPRIVLANRNEVFHREII--SEMGELGVLGPTIKGYGCAGVSSVAYGLLA-RELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQQQQKYLPRLAKGELLGCFGLTEPNHGSDPGSMETRALHNPSNRSYTLNGAKTWITNSPVADLFVVWARCE----DNCIRGFLLEKGMRGLSAPKIEGKFSLRASAT 231
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACAD8_HUMAN (Isobutyryl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACAD8 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.225e-15 Identity = 54/210 (25.71%), Postives = 91/210 (43.33%), Query Frame = 2 Query: 125 SLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 S+ ++ Q +F++ FA +AP A+ DQ FP DV + G+ + + E ++ S H N+C + G+ Q+ K+ P L + E + ++EP +GSD + A + YI+NG+K + + + VV +T G KGI+ ++EKG PG S +K K+G T Sbjct: 38 SMGLNEEQKEFQKVAFDFAAREMAPNMAEWDQKELFPVDV--MRKAAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATGCTSTTAYISIH-NMCAWMIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGAGESDIYVVMCRTG-GPGPKGISCIVVEKGTPGLSFGKKEKKVGWNSQPT 243
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: Y897_MYCBO (Uncharacterized protein Mb0897 OS=Mycobacterium bovis GN=fadE10 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13 Identity = 48/168 (28.57%), Postives = 83/168 (49.40%), Query Frame = 2 Query: 254 KLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVR-HGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKTDIKAGSK-GITAFIIEKGMPGFSTAQKLDKLGMRG 745 K + G+ P E + + ++ S+G AH ++ + + ++ G+ QK ++LP+ +G + A ++EP+ GSD M A +D G Y + G K+W TNG VA LVV A+ G + GI+AF++E PG + ++ +G+RG Sbjct: 88 KGLAELGCFGLKIPSEYGGLNMSQVAYNRVLMMVTTVHSSLGALLSAHQSIGVPEPLKLAGTAEQKRRFLPRCAAGA-ISAFLLTEPDVGSDPARMASTATPIDDGQAYELEGVKLWTTNGVVADLLVVMARVPRSEGHRGGISAFVVEADSPGITVERRNKFMGLRG 254
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: Y873_MYCTU (Uncharacterized protein Rv0873/MT0896 OS=Mycobacterium tuberculosis GN=fadE10 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13 Identity = 48/168 (28.57%), Postives = 83/168 (49.40%), Query Frame = 2 Query: 254 KLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVR-HGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKTDIKAGSK-GITAFIIEKGMPGFSTAQKLDKLGMRG 745 K + G+ P E + + ++ S+G AH ++ + + ++ G+ QK ++LP+ +G + A ++EP+ GSD M A +D G Y + G K+W TNG VA LVV A+ G + GI+AF++E PG + ++ +G+RG Sbjct: 88 KGLAELGCFGLKIPSEYGGLNMSQVAYNRVLMMVTTVHSSLGALLSAHQSIGVPEPLKLAGTAEQKRRFLPRCAAGA-ISAFLLTEPDVGSDPARMASTATPIDDGQAYELEGVKLWTTNGVVADLLVVMARVPRSEGHRGGISAFVVEADSPGITVERRNKFMGLRG 254 The following BLAST results are available for this feature:
BLAST of CN185353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185353 ID=CN185353; Name=CN185353; organism=Citrus sinensis; type=EST; length=757bpback to top |