DC887797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS19_ICTPU (40S ribosomal protein S19 OS=Ictalurus punctatus GN=rps19 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 2.667e-35 Identity = 70/127 (55.12%), Postives = 90/127 (70.87%), Query Frame = -3 Query: 140 RPYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRIAVVA 520 R AA LK+SGK+++P W DIVK KELAP D +W+YIRAAS R +Y RGG+GVGS +IYGG KRNG CP HFS S +VAR +L L+ ++E D GGRR+T G RDLD++AG++A + Sbjct: 18 RALAAFLKKSGKLKVPDWVDIVKLAKHKELAPCDDNWFYIRAASTVRHLYLRGGVGVGSMIKIYGGRKRNGVCPSHFSVGSKNVARKVLQALEALKMVEKDPNGGRRLTPQGTRDLDRIAGQVAAAS 144
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS19_RAT (40S ribosomal protein S19 OS=Rattus norvegicus GN=Rps19 PE=2 SV=3) HSP 1 Score: 147.517 bits (371), Expect = 3.483e-35 Identity = 69/124 (55.65%), Postives = 89/124 (71.77%), Query Frame = -3 Query: 149 RPYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRIA 520 R AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +Y RGG GVGS +IYGG +RNG P HFS+ S SVAR +L L+ ++E D GGR++T GQRDLD++AG++A Sbjct: 16 RALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVA 139
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS19_MOUSE (40S ribosomal protein S19 OS=Mus musculus GN=Rps19 PE=1 SV=3) HSP 1 Score: 147.517 bits (371), Expect = 3.483e-35 Identity = 69/124 (55.65%), Postives = 89/124 (71.77%), Query Frame = -3 Query: 149 RPYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRIA 520 R AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +Y RGG GVGS +IYGG +RNG P HFS+ S SVAR +L L+ ++E D GGR++T GQRDLD++AG++A Sbjct: 16 RALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVA 139
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS19_GILMI (40S ribosomal protein S19 OS=Gillichthys mirabilis GN=rps19 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 3.483e-35 Identity = 68/127 (53.54%), Postives = 92/127 (72.44%), Query Frame = -3 Query: 140 RPYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRIAVVA 520 R AA LK+SGK+++P W D+VK G KELAP D +W+YIRAAS R +Y RGG GVGS +IYGG +RNG CP H+S+ S +VAR +L L+ +IE D GGRR+T+ G RDLD++AG+++ + Sbjct: 16 RALAAFLKKSGKLKVPDWVDLVKLGRHKELAPSDENWFYIRAASTVRHLYLRGGAGVGSMTKIYGGRQRNGVCPAHYSEGSKNVARKVLQALELLKMIEKDPNGGRRLTAQGTRDLDRIAGQVSAAS 142
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS19_PIG (40S ribosomal protein S19 (Fragment) OS=Sus scrofa GN=RPS19 PE=2 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 1.728e-34 Identity = 68/121 (56.20%), Postives = 86/121 (71.07%), Query Frame = -3 Query: 158 RPYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAG 520 R AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +Y RGG GVGS +IYGG +RNG P HFS+ S SVAR +L L+ ++E D GGR++T GQRDLD++AG Sbjct: 16 RALAAFLKKSGKLKVPEWVDTVKLAXHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAG 136
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS19_PAGMA (40S ribosomal protein S19 OS=Pagrus major GN=rps19 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 5.029e-34 Identity = 67/124 (54.03%), Postives = 89/124 (71.77%), Query Frame = -3 Query: 149 RPYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRIA 520 R AA LK+SGK+++P W D+VK G KELAP D +W+YIR+AS R +Y RGG GVGS +IYG +RNG CP H+S S +VAR +L L+ +IE D GGRR+T+ G RDLD++AG++A Sbjct: 16 RALAAFLKKSGKLKVPDWVDLVKLGKHKELAPSDENWFYIRSASTVRHLYLRGGAGVGSMTKIYGSRQRNGVCPAHYSVGSKNVARKVLQALELLKMIEKDPNGGRRLTAQGTRDLDRIAGQVA 139
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS19B_SCHPO (40S ribosomal protein S19-B OS=Schizosaccharomyces pombe GN=rps19b PE=2 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 3.260e-33 Identity = 66/118 (55.93%), Postives = 81/118 (68.64%), Query Frame = -3 Query: 161 YAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVA 514 YAA LKRSGK+ P W DIVKTGT KELAPYDPDWYY+RAA++AR IY R +GVG ++YGG G P H SGSV R ++ L+ ++E GGRRI+ GQRDLD++A Sbjct: 18 YAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRIA 135
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS19A_SCHPO (40S ribosomal protein S19-A OS=Schizosaccharomyces pombe GN=rps19a PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.260e-33 Identity = 66/118 (55.93%), Postives = 81/118 (68.64%), Query Frame = -3 Query: 161 YAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVA 514 YAA LKRSGK+ P W DIVKTGT KELAPYDPDWYY+RAA++AR IY R +GVG ++YGG G P H SGSV R ++ L+ ++E GGRRI+ GQRDLD++A Sbjct: 18 YAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRIA 135
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS19_DICDI (40S ribosomal protein S19 OS=Dictyostelium discoideum GN=rps19 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.560e-33 Identity = 64/122 (52.46%), Postives = 90/122 (73.77%), Query Frame = -3 Query: 152 YAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDS-KGGRRITSSGQRDLDQVAGRI 514 YA LK++G++++P WNDI KT T +EL P +PDW Y R A++ARK+Y RGG GV + RR++GG +RNG P HF+ +G R+ L QLQN +IE D+ KGGR IT++G+RDLD++A +I Sbjct: 20 YARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLARKVYIRGGDGVATYRRVFGGNRRNGVRPNHFADVNGGNIRYCLKQLQNLKVIETDAVKGGRTITATGRRDLDRIAKQI 141
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS19_AEQIR (40S ribosomal protein S19 OS=Aequipecten irradians GN=RPS19 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.618e-32 Identity = 60/120 (50.00%), Postives = 86/120 (71.67%), Query Frame = -3 Query: 152 AAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRI 511 AA LK+SGK+++P W I+K EL+PYD DW+Y RAAS+ R +Y R GVG+ +IYG KRNG+ P H+ +SSGSVAR +L L+ ++E D+ GGR++TS GQ+DLD++A ++ Sbjct: 18 AAFLKKSGKMKIPEWATIIKLSKFNELSPYDEDWFYTRAASICRHLYIRSPAGVGALTKIYGDRKRNGTVPSHYCRSSGSVARRVLQALETQKLVEKDANGGRKLTSQGQKDLDRIAAQV 137 The following BLAST results are available for this feature:
BLAST of DC887797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887797 ID=DC887797; Name=DC887797; organism=Citrus sinensis; type=EST; length=522bpback to top |