CN185317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: RBP4B_XENLA (Histone-binding protein RBBP4-B OS=Xenopus laevis GN=rbbp4-B PE=1 SV=3) HSP 1 Score: 277.33 bits (708), Expect = 7.783e-74 Identity = 127/191 (66.49%), Postives = 155/191 (81.15%), Query Frame = 1 Query: 304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876 R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S +V VFDY+KHPSKP G C+PDLRLRGH E YGLSW+ G+LLS SDD ICL Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSCDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICL 204
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: RBBP4_DANRE (Histone-binding protein RBBP4 OS=Danio rerio GN=rbbp4 PE=2 SV=3) HSP 1 Score: 273.092 bits (697), Expect = 1.468e-72 Identity = 126/191 (65.97%), Postives = 154/191 (80.63%), Query Frame = 1 Query: 304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876 R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+SV +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT +++V VFDY+KHPSKP G C+PDLRLRGH E YGLSW+ LLS SDD ICL Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSVHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLRSCLLSASDDHTICL 204
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: RBP4A_XENLA (Histone-binding protein RBBP4-A OS=Xenopus laevis GN=rbbp4-A PE=1 SV=3) HSP 1 Score: 270.781 bits (691), Expect = 7.285e-72 Identity = 124/191 (64.92%), Postives = 154/191 (80.63%), Query Frame = 1 Query: 304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876 R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WL D P GKD+S+ +++LGTHTS+ E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +I HDGEVNRARYMPQNP +IATKT +++V VFDY+KHPSKP G C+P+LRLRGH E YGLSW+ G+LLS SDD ICL Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLSDVTRPDGKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKITHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPNLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICL 204
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: RBBP7_DANRE (Histone-binding protein RBBP7 OS=Danio rerio GN=rbbp7 PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 7.285e-72 Identity = 126/192 (65.62%), Postives = 155/192 (80.73%), Query Frame = 1 Query: 304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDR-SDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876 R+INEEYKIWKKNTPFLYDLV+THALEWPSLTV+WLPD P GKDY V +++LGTHTS+ E N+L++A Q+P DD++ DA HYD ++ ++FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT +++V FDY+KHPSKP G CSPDLRLRGH E YGLSW+ G+LLS SDD ICL Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTSD-EQNHLVIASAQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLAFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICL 204
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: CAF1_DROME (Probable histone-binding protein Caf1 OS=Drosophila melanogaster GN=Caf1 PE=1 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 9.514e-72 Identity = 126/191 (65.97%), Postives = 153/191 (80.10%), Query Frame = 1 Query: 304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876 R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD + GKDYSV ++ILGTHTS+ E N+L++A VQLP +D++ D HYD+++ +FGGFG GK++I +INH+GEVNRARYMPQN +IATKT S++V VFDY+KHPSKP G C PDLRLRGH E YGLSW+ G+LLS SDD ICL Sbjct: 19 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSD-EQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICL 208
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: RBBP7_RAT (Histone-binding protein RBBP7 OS=Rattus norvegicus GN=Rbbp7 PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.623e-71 Identity = 122/191 (63.87%), Postives = 154/191 (80.63%), Query Frame = 1 Query: 304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876 R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+ E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH E YGLSW+ GHLLS SDD +CL Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCL 203
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: RBBP7_MOUSE (Histone-binding protein RBBP7 OS=Mus musculus GN=Rbbp7 PE=1 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.623e-71 Identity = 122/191 (63.87%), Postives = 154/191 (80.63%), Query Frame = 1 Query: 304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876 R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+ E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH E YGLSW+ GHLLS SDD +CL Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCL 203
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: RBBP7_MACFA (Histone-binding protein RBBP7 OS=Macaca fascicularis GN=RBBP7 PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.623e-71 Identity = 122/191 (63.87%), Postives = 154/191 (80.63%), Query Frame = 1 Query: 304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876 R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+ E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH E YGLSW+ GHLLS SDD +CL Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCL 203
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: RBBP7_HUMAN (Histone-binding protein RBBP7 OS=Homo sapiens GN=RBBP7 PE=1 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.623e-71 Identity = 122/191 (63.87%), Postives = 154/191 (80.63%), Query Frame = 1 Query: 304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876 R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+ E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH E YGLSW+ GHLLS SDD +CL Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCL 203
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: RBBP7_CHICK (Histone-binding protein RBBP7 OS=Gallus gallus GN=RBBP7 PE=1 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 2.768e-71 Identity = 124/191 (64.92%), Postives = 154/191 (80.63%), Query Frame = 1 Query: 304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876 R+I+EEYKIWKKNTPFLYDLV+THALEWPSLTV+WLPD P GKDY++ ++LGTHTS+ E N+L++A+VQ+P DD + D YD ++ +FGGFG GK++ +INH+GEVNRARYMPQNP++IATKT SA+V VFDY+KHPSKP G C+PDLRLRGH E YGLSW+ +GHLLS SDD +CL Sbjct: 14 RVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLGTHTSD-EQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCL 202 The following BLAST results are available for this feature:
BLAST of CN185317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185317 ID=CN185317; Name=CN185317; organism=Citrus sinensis; type=EST; length=878bpback to top |