CN185317

Overview
NameCN185317
Unique NameCN185317
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: RBA1_CAEEL (Probable histone-binding protein rba-1 OS=Caenorhabditis elegans GN=rba-1 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.837e-50
Identity = 92/188 (48.94%), Postives = 128/188 (68.09%), Query Frame = 1
Query:  313 NEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCAN-GKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQIC 873
            ++E++IWKKN P+LYD V+T  +EWPSL+V+W+PD  +    D S+ +MI GTHT     N+LM+++  +  D  E D   +D +R +FGG+G  +  K     +INH GEV+RARYMP NPF+IA++  S +VY+FDY+KHPS+P  D    P LRL+GH  E YG+SWS  +EGHLL+  DD  IC
Sbjct:   11 SKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDSSMHRMIHGTHTCGGVQNHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSAAKWDTEIKINHPGEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPK-DTKFRPQLRLKGHEGEGYGMSWSNTREGHLLTAGDDGMIC 197          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: MSI3_ARATH (WD-40 repeat-containing protein MSI3 OS=Arabidopsis thaliana GN=MSI3 PE=1 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 3.293e-48
Identity = 98/191 (51.31%), Postives = 125/191 (65.45%), Query Frame = 1
Query:  310 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD--YSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876
            + EE+ IWK+NTPFLYDL+I+H LEWPSLT+ W+P    P  KD  ++V K+ILGTHTS    ++LM+A V +P  D+E      D +            KV+I Q+I  DGEVNRAR MPQ P L+  KT  +EV++FDY++   KP     C PDLRL GH  E YGL+WS FKEG+LLSGS D +ICL
Sbjct:   15 VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHTSGGAQDFLMVADVVIPTPDAEPGLGGRDQEP--------IVPKVEIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQ-TSECDPDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICL 196          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: MSI2_ARATH (WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana GN=MSI2 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.617e-48
Identity = 101/196 (51.53%), Postives = 125/196 (63.78%), Query Frame = 1
Query:  310 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD--YSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCAN-----GKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876
            + E++ +WKKNTPFLYDL+I+H LEWPSLTV W+P    P   D  + V K+ILGTHTS +  ++LM+A V  P  ++E              G G AN      KV+I Q+I  DGEVNRAR MPQ P L+  KT   EV++FDY+KH +K      C PDLRL GH  E YGLSWS FKEG+LLSGS D +ICL
Sbjct:   14 VEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGVHKLILGTHTSGSAQDFLMVADVVTPTPNAE-------------PGIGGANQDPFIPKVEIRQRIRVDGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQ-TSECDPDLRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICL 195          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: HAT2_SCHPO (Histone acetyltransferase type B subunit 2 OS=Schizosaccharomyces pombe GN=mis16 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 7.336e-48
Identity = 94/197 (47.72%), Postives = 128/197 (64.97%), Query Frame = 1
Query:  304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDF------GGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876
            + I EEYK+WK+N PFLYDLVITHALEWPSLT++WLPD++  PG DYS+Q++ILGTHTS N+ NYL +A VQLP         ++D+D ++F            +  ++I Q+I HDG+VNRARYMPQ P +IAT       Y+FD + H +     G   P   L+GH+ E +GL W+    G+L +G++D  ICL
Sbjct:   24 KTIQEEYKLWKQNVPFLYDLVITHALEWPSLTIQWLPDKKTIPGTDYSIQRLILGTHTSGNDQNYLQIASVQLP---------NFDEDTTEFTPSTIRRAQATGSYTIEISQKIPHDGDVNRARYMPQKPEIIATMGEGGNAYIFDTTCHDAL--TTGEALPQAVLKGHTAEGFGLCWNPNLPGNLATGAEDQVICL 209          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: HAT2_GIBZE (Histone acetyltransferase type B subunit 2 OS=Gibberella zeae GN=HAT2 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 9.581e-48
Identity = 92/195 (47.18%), Postives = 127/195 (65.13%), Query Frame = 1
Query:  304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANG----KVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876
            RLINEEYK WKKN+PFL       AL WP+LTV+W PD +EP GK+Y + +++LGTHTS+  PNYL +A VQ+P   + N    YD++R + GG+G +      K  I+Q+I H GEVN+ARY PQNP ++AT  V  ++ +FD +KHP  P   G  +  + L GH  E +GL+W+  +EG L SGS+D  + L
Sbjct:   16 RLINEEYKTWKKNSPFLT------ALTWPTLTVQWFPDVKEPEGKNYKIHRLLLGTHTSDESPNYLQIADVQIPKVVAPNPD-DYDEERGEIGGYGKSGDVAAIKCDIVQRIEHPGEVNKARYQPQNPDILATLCVDGKILIFDRTKHPLDPTSTGKVNAQIELVGHEAEGFGLNWNPHEEGCLASGSEDTTMRL 203          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: YEC6_SCHPO (Uncharacterized WD repeat-containing protein C25H1.06 OS=Schizosaccharomyces pombe GN=SPAC25H1.06 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.122e-35
Identity = 75/191 (39.27%), Postives = 121/191 (63.35%), Query Frame = 1
Query:  310 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSE---NDARHYDDDRSDFGGFGCANG-KVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQI 870
            I+E++  WKKN+  LY+L+IT  L WPSL+++WL   E    K     +++LGTH +E  PN+L LA + LP D ++   +  +HY++D  + GG+   +  K QI Q+I H+G+VNR R+MPQNP +IAT +     Y+FD +K+ S P  +    P++ L GH  E +GLSW++ +   L++ ++D++I
Sbjct:   20 ISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAMESITEKAVLKNRLLLGTHAAEGMPNFLQLADLDLP-DFNQTILDPVKHYNEDTGELGGYSMQHSCKFQISQRILHNGDVNRVRHMPQNPNIIATMSSCGNAYIFDRTKYTSMPAEE--FLPNISLIGHKKEGFGLSWNRQQNCRLVTAANDSKI 207          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: HAT2_ENCCU (Histone acetyltransferase type B subunit 2 OS=Encephalitozoon cuniculi GN=HAT2 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.122e-35
Identity = 76/195 (38.97%), Postives = 122/195 (62.56%), Query Frame = 1
Query:  304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPD--REEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLP--LDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876
            +++NEEYKIWKKN P+LYDL+ +H LEWPSL+V+W PD  R+E  G+  + Q+++L THTS +E  Y+++A+V+ P   D+S N+         + GG    + +++IIQ+I+   E NR RY P    ++A ++   +++V+DY+KH S   +     PD+ LRGHS   +GLSW+    G L    +  ++C+
Sbjct:    9 KIVNEEYKIWKKNVPYLYDLMFSHTLEWPSLSVQWFPDVRRDEEAGR--TTQRLLLSTHTSGSEEEYILIAKVEFPDEFDESLNE---------EVGG----DMRLKIIQRISIMDEANRVRYNPSACNVLAVRSDLPDIHVYDYTKHLSHEKIP---RPDMVLRGHSAGGFGLSWNHLNPGELAGCGEGGEVCV 185          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: HAT2_CANGA (Histone acetyltransferase type B subunit 2 OS=Candida glabrata GN=HAT2 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.257e-31
Identity = 74/189 (39.15%), Postives = 111/189 (58.73%), Query Frame = 1
Query:  310 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876
            ++EEY++WK N P LYD V    L WP+LTVEWLP +     +  + Q++ILGTHTS  E NYL +  V LP++ +EN  +  + D  D          V+I+++  HDGE+ RARYMPQ+  +IAT     +++++D SK+  +  L         L  H+   YGL+++  ++  LLSGSDD+ I L
Sbjct:   30 VDEEYELWKSNVPMLYDFVSETRLTWPTLTVEWLPQKNLVAAR--TRQQLILGTHTSGEEQNYLKIGAVDLPVEVTENSKKDREIDEED---EDMVLSNVKIVKKFPHDGEITRARYMPQDDNIIATINGEGKIFIYDRSKNGVEALLS-------TLEYHTENGYGLAFNANEKYSLLSGSDDSNIAL 206          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: HAT2_KLULA (Histone acetyltransferase type B subunit 2 OS=Kluyveromyces lactis GN=HAT2 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.537e-29
Identity = 73/192 (38.02%), Postives = 107/192 (55.73%), Query Frame = 1
Query:  310 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEP---PGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876
            INEEY +W  N P +YD V    L WPSLTV+WLP   +P    G+    Q++++GT T++NEPNYL +A + LP + + +     DD + +         K++I+++  H+ EV RARYMPQ+P +IAT   +  VY+FD +    K    GA +       H    YGL+++    G LLS SDD  + L
Sbjct:   13 INEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQELLIGTLTTDNEPNYLKIAAIDLPENVTSSKPSVSDDAKEN--ELSHRQSKIKIVRKFKHEQEVTRARYMPQSPNIIATLNGAGIVYIFDRN---IKEKDHGAIA---SFSYHKENGYGLAFNPTVSGQLLSASDDGTVAL 196          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: HAT2_DEBHA (Histone acetyltransferase type B subunit 2 OS=Debaryomyces hansenii GN=HAT2 PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.301e-28
Identity = 65/189 (34.39%), Postives = 107/189 (56.61%), Query Frame = 1
Query:  310 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876
            I EEY++W+KN  ++Y+ V   AL WPSLT++WLP+ +    +     K++LGTHTS  + NYL LA  Q+PL +S N      +++S+         +++I ++  ++ E+NRARYMPQ+P +++T   + E+ +++              +       H    YGLSWS  K+G+LL+ SDD  + L
Sbjct:   21 IKEEYQLWRKNCRYMYEFVSETALTWPSLTIQWLPENKTNEAEGLIDAKLLLGTHTSGEDTNYLKLASTQIPLSNSSN-----TEEKSN----KKVTSRIKITKKFENNFEINRARYMPQDPSIVSTINGAGEIDLYNLGGDQK--------TAIAHFTPHEDNGYGLSWSPHKKGYLLTASDDKTVVL 192          
The following BLAST results are available for this feature:
BLAST of CN185317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
RBA1_CAEEL7.837e-5048.94Probable histone-binding protein rba-1 OS=Caenorha... [more]
MSI3_ARATH3.293e-4851.31WD-40 repeat-containing protein MSI3 OS=Arabidopsi... [more]
MSI2_ARATH5.617e-4851.53WD-40 repeat-containing protein MSI2 OS=Arabidopsi... [more]
HAT2_SCHPO7.336e-4847.72Histone acetyltransferase type B subunit 2 OS=Schi... [more]
HAT2_GIBZE9.581e-4847.18Histone acetyltransferase type B subunit 2 OS=Gibb... [more]
YEC6_SCHPO7.122e-3539.27Uncharacterized WD repeat-containing protein C25H1... [more]
HAT2_ENCCU7.122e-3538.97Histone acetyltransferase type B subunit 2 OS=Ence... [more]
HAT2_CANGA1.257e-3139.15Histone acetyltransferase type B subunit 2 OS=Cand... [more]
HAT2_KLULA1.537e-2938.02Histone acetyltransferase type B subunit 2 OS=Kluy... [more]
HAT2_DEBHA1.301e-2834.39Histone acetyltransferase type B subunit 2 OS=Deba... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001C10_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185317 ID=CN185317; Name=CN185317; organism=Citrus sinensis; type=EST; length=878bp
GGGGGGGAAGCTAGCGGGCCCCCTCGCTTCTTTGTCGTTTTTTGGGTTCT
ATTTCGTCGAGAGAAAGGGAGCAATCGGTTCATCTGCTGAGATAGAGGTT
TTGGCGCCGTTTCCTCCTCCGCTCGCCAGTTCCATTTTAATAATAATTTA
CCGTTAGGGGAAGCAAATAATTGTAAAAGCAGATGAATGGAGTTGCATCT
ACCTCAGTTGCAGAAGTAGGACTTTGGCGGCAACAAAACTTAAGAAATTG
AGCGAAGAGCAATGGGAAAAGACGAGGAAGAGATGAGGGGAGAGATAGAA
GAGAGGTTGATAAATGAAGAATACAAGATTTGGAAGAAGAACACTCCGTT
TCTGTATGATCTTGTCATCACACATGCCCTTGAATGGCCTTCTCTGACTG
TTGAGTGGTTGCCTGATAGAGAAGAACCCCCTGGCAAAGACTATTCTGTT
CAGAAAATGATCCTTGGGACACACACATCTGAGAATGAGCCCAACTATCT
CATGCTTGCTCAGGTCCAGCTTCCTCTTGATGACTCAGAGAATGATGCCC
GCCATTACGATGATGACCGCTCTGATTTTGGTGGCTTTGGCTGTGCCAAT
GGCAAGGTGCAAATAATTCAGCAAATAAACCATGATGGAGAGGTTAACCG
GGCCCGTTATATGCCTCAGAATCCATTTCTTATTGCCACGAAGACTGTTA
GTGCTGAGGTCTATGTTTTTGATTATAGCAAACACCCTTCTAAACCTCCT
CTGGATGGTGCATGTAGTCCTGATCTGAGGCTGAGGGGCCATAGCACTGA
ANGATACGGTTTATCGTGGAGCAAGTTCAAGGAAGGTCATCTGTTAAGTG
GTTCTGATGATGCTCAAATATGTTTATG
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