CN185314

Overview
NameCN185314
Unique NameCN185314
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185314 vs. ExPASy Swiss-Prot
Match: VATE1_MOUSE (V-type proton ATPase subunit E 1 OS=Mus musculus GN=Atp6v1e1 PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.586e-36
Identity = 80/175 (45.71%), Postives = 120/175 (68.57%), Query Frame = 3
Query:  174 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEY--AQKLQVHPPEIIVDHHIYLP 692
            ++DADV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEKQ+E +KKI+ S  +N +R+KVL+A+DDL+++++  A + +  V +D   Y+ LL GL++Q L +L EP +++RCRK D  LV++ ++ A   Y  A K  V   ++ +D   YLP
Sbjct:    3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQGLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKKDV---DVQIDQEAYLP 174          
BLAST of CN185314 vs. ExPASy Swiss-Prot
Match: VATE1_BOVIN (V-type proton ATPase subunit E 1 OS=Bos taurus GN=ATP6V1E1 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.586e-36
Identity = 80/175 (45.71%), Postives = 120/175 (68.57%), Query Frame = 3
Query:  174 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEY--AQKLQVHPPEIIVDHHIYLP 692
            ++DADV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEKQ+E +KKI+ S  +N +R+KVL+A+DDL+++++  A + +  V +D   Y+ LL GL++Q L +L EP +++RCRK D  LV++ ++ A   Y  A K  V   ++ +D   YLP
Sbjct:    3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQGLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPVYKVATKRDV---DVQIDQEAYLP 174          
BLAST of CN185314 vs. ExPASy Swiss-Prot
Match: VATE1_MACFA (V-type proton ATPase subunit E 1 OS=Macaca fascicularis GN=ATP6V1E1 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.705e-36
Identity = 80/175 (45.71%), Postives = 120/175 (68.57%), Query Frame = 3
Query:  174 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEY--AQKLQVHPPEIIVDHHIYLP 692
            ++DADV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEKQ+E +KKI+ S  +N +R+KVL+A+DDL+++++  A + +  V +D   Y+ LL GL++Q L +L EP +++RCRK D  LV++ ++ A   Y  A K  V   ++ +D   YLP
Sbjct:    3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQGLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDV---DVQIDQESYLP 174          
BLAST of CN185314 vs. ExPASy Swiss-Prot
Match: VATE1_HUMAN (V-type proton ATPase subunit E 1 OS=Homo sapiens GN=ATP6V1E1 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.705e-36
Identity = 80/175 (45.71%), Postives = 120/175 (68.57%), Query Frame = 3
Query:  174 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEY--AQKLQVHPPEIIVDHHIYLP 692
            ++DADV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEKQ+E +KKI+ S  +N +R+KVL+A+DDL+++++  A + +  V +D   Y+ LL GL++Q L +L EP +++RCRK D  LV++ ++ A   Y  A K  V   ++ +D   YLP
Sbjct:    3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQGLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKNDV---DVQIDQESYLP 174          
BLAST of CN185314 vs. ExPASy Swiss-Prot
Match: VATE1_RAT (V-type proton ATPase subunit E 1 OS=Rattus norvegicus GN=Atp6v1e1 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.532e-36
Identity = 80/175 (45.71%), Postives = 120/175 (68.57%), Query Frame = 3
Query:  174 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEY--AQKLQVHPPEIIVDHHIYLP 692
            ++DADV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEKQ+E +KKI+ S  +N +R+KVL+A+DDL+++++  A + +  V +D   Y+ LL GL++Q L +L EP +++RCRK D  LV++ ++ A   Y  A K  V   ++ +D   YLP
Sbjct:    3 LSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQIEQQKKIQMSNLMNQARLKVLRARDDLITDLLNEAKQRLSKVVKDTTRYQVLLDGLVLQGLYQLLEPRMIVRCRKQDFPLVKAAVQKAIPMYKIATKKDV---DVQIDLEAYLP 174          
BLAST of CN185314 vs. ExPASy Swiss-Prot
Match: VATE_HETSC (V-type proton ATPase subunit E OS=Heterodera schachtii PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.870e-36
Identity = 78/174 (44.83%), Postives = 115/174 (66.09%), Query Frame = 3
Query:  174 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLPP 695
            ++D DV KQ++ M+ FI QEA EKA EI   AEEEFNIEK +LV+ +++KI + YE+KEKQVE+++KI+ S   N SR+K L+A+DD + N++E A   +  +S D   Y  +LKGL++Q L +L E  V+LRCRK D  +V  +L    EE  Q+   +  E+ +D+  +L P
Sbjct:    3 ISDNDVQKQLRHMMAFIEQEANEKAEEIDAKAEEEFNIEKGKLVQLQRQKIMEYYEKKEKQVELQRKIQRSNMQNQSRLKCLKARDDHLKNVLEEARANLSKISADRERYPAILKGLLLQGLFQLLESKVVLRCRKKDEEMVARILPECLEE-VQRTWGNRSEVKIDNEHFLSP 175          
BLAST of CN185314 vs. ExPASy Swiss-Prot
Match: VATE2_HUMAN (V-type proton ATPase subunit E 2 OS=Homo sapiens GN=ATP6V1E2 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35
Identity = 79/172 (45.93%), Postives = 113/172 (65.70%), Query Frame = 3
Query:  174 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYL 689
            ++D DV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEKQ+E +KKI  S   N +R+KVL+A++DL+S+++  A   +  +  D   Y+ LL  L++Q LLRL EP +++RCR  D  LVE+ ++ A  EY    Q H  E+ +D   YL
Sbjct:    3 LSDVDVKKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQIEQQKKILMSTMRNQARLKVLRARNDLISDLLSEAKLRLSRIVEDPEVYQGLLDKLVLQGLLRLLEPVMIVRCRPQDLLLVEAAVQKAIPEYMTISQKH-VEVQIDKEAYL 173          
BLAST of CN185314 vs. ExPASy Swiss-Prot
Match: VATE2_BOVIN (V-type proton ATPase subunit E 2 OS=Bos taurus GN=ATP6V1E2 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.662e-35
Identity = 74/153 (48.37%), Postives = 106/153 (69.28%), Query Frame = 3
Query:  174 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEY 632
            ++D DV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI + YE+KEKQ+E +KKI+ S   N +R+KVL+A++DL+S ++  A   +  +  D   Y+ LL  L++Q LLRL EP V++RCR  DH LVE+ ++ A  +Y
Sbjct:    3 LSDVDVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMEYYEKKEKQIEQQKKIQMSTLRNQARLKVLRARNDLISELLNDAKLRLSRIVTDPEFYQGLLDKLVLQGLLRLLEPVVIVRCRPQDHFLVEAAVQRAIPQY 155          
BLAST of CN185314 vs. ExPASy Swiss-Prot
Match: VATE2_MOUSE (V-type proton ATPase subunit E 2 OS=Mus musculus GN=Atp6v1e2 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.701e-35
Identity = 79/173 (45.66%), Postives = 113/173 (65.32%), Query Frame = 3
Query:  174 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLP 692
            + D DV KQI+ M+ FI QEA EKA EI   AEEEFNIEK +LV+ ++ KI   +E+KEKQ+E +KKI+ S   N +RI VL+A+D+L+  +++ A   +  +  D   Y+ LL  L++Q+LLRL EP +++RCR  D HLVES +  A  +Y +  Q H  E+ VD   +LP
Sbjct:    3 LTDIDVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQTQRLKIMDYFEKKEKQIEQQKKIQLSTMRNQARITVLRARDNLILELLKDAKMRLSRIVSDEEIYQDLLDKLVLQALLRLLEPVMIVRCRPQDLHLVESAVLRAIPQYMRLCQKH-LEVQVDQTEHLP 174          
BLAST of CN185314 vs. ExPASy Swiss-Prot
Match: VATE_DICDI (V-type proton ATPase subunit E OS=Dictyostelium discoideum GN=vatE PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.217e-28
Identity = 66/176 (37.50%), Postives = 110/176 (62.50%), Query Frame = 3
Query:  174 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDLVSNMMEAASKEVLNVSRDHNSYKKLLKGLIVQSLLRLKEPAVLLRCRKDDHHLVESVLESAKEEYAQKLQVHPPEIIVDHHIYLPPGP 701
            M+D  V+ Q+ QM  FI QEA++KANEI   A +EF  EK ++ + EK KI +EYE+K+K +E++KKI  S +LN SR+ VL+ +++ + ++++ A K++  +S D + Y+ +LK LI Q  ++L E  + +  RK+D  L+E     A  +Y + +     ++ VD   +LP GP
Sbjct:    1 MDDTQVNAQLDQMKNFILQEAQDKANEIKTKATQEFTSEKGRIFQNEKIKIIKEYEKKQKLIEVQKKINLSNELNKSRLSVLKVREECLRDVIKEAQKKLATISDDKDKYQTILKNLIYQGFVKLNENKIQVVGRKEDAGLLEKATTEAAAQYKKNVG-KSIDVSVDKERFLPQGP 175          
The following BLAST results are available for this feature:
BLAST of CN185314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
VATE1_MOUSE1.586e-3645.71V-type proton ATPase subunit E 1 OS=Mus musculus G... [more]
VATE1_BOVIN1.586e-3645.71V-type proton ATPase subunit E 1 OS=Bos taurus GN=... [more]
VATE1_MACFA2.705e-3645.71V-type proton ATPase subunit E 1 OS=Macaca fascicu... [more]
VATE1_HUMAN2.705e-3645.71V-type proton ATPase subunit E 1 OS=Homo sapiens G... [more]
VATE1_RAT3.532e-3645.71V-type proton ATPase subunit E 1 OS=Rattus norvegi... [more]
VATE_HETSC7.870e-3644.83V-type proton ATPase subunit E OS=Heterodera schac... [more]
VATE2_HUMAN5.101e-3545.93V-type proton ATPase subunit E 2 OS=Homo sapiens G... [more]
VATE2_BOVIN6.662e-3548.37V-type proton ATPase subunit E 2 OS=Bos taurus GN=... [more]
VATE2_MOUSE8.701e-3545.66V-type proton ATPase subunit E 2 OS=Mus musculus G... [more]
VATE_DICDI1.217e-2837.50V-type proton ATPase subunit E OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001C08_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185314 ID=CN185314; Name=CN185314; organism=Citrus sinensis; type=EST; length=719bp
GCAGGAAACCAAGGGGACTCGTCACTCGTGATCGTAAATTATAGGAAGCA
GGAAAACCCACCTGTTACTAACCTTACCCGCACCGTCTGTCTCTCCTTAG
CGATCGAAGAAAGTCGAATCGCTCTTCTCATTTTGATATCAACAATCTAA
TCAAATCAAAAGATCCCGCGAAAATGAACGACGCTGATGTTTCGAAGCAG
ATCCAGCAGATGGTGCGGTTTATCCGCCAAGAAGCTGAAGAGAAAGCCAA
CGAGATCTCAGTTTCTGCCGAAGAAGAATTCAACATAGAGAAGTTGCAGC
TGGTGGAAGCAGAGAAGAAGAAGATCAGACAAGAGTACGAGCGGAAAGAG
AAGCAAGTCGAAATCAGAAAGAAGATTGAGTACTCCATGCAGCTGAATGC
TTCTCGGATCAAAGTTCTTCAAGCTCAGGATGATTTGGTCAGTAATATGA
TGGAGGCAGCATCAAAGGAGGTTTTGAATGTGAGTCGCGATCACAATTCA
TATAAGAAGCTTTTGAAGGGTCTTATTGTTCAGAGTTTGCTCAGGCTGAA
AGAGCCAGCTGTGTTACTGAGATGCCGCAAAGATGACCATCATTTGGTGG
AGTCTGTTTTGGAGTCAGCAAAAGAGGAATATGCACAGAAATTGCAGGTT
CACCCACCAGAGATAATTGTGGATCATCACATCTATCTTCCGCCTGGCCC
TGGACATCATAATGCCCAT
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