CN185310

Overview
NameCN185310
Unique NameCN185310
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length583
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH1B_PAPHA (Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH1B PE=2 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 2.213e-50
Identity = 98/179 (54.75%), Postives = 126/179 (70.39%), Query Frame = 1
Query:   46 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            TAG+VI+CKAAV WE  KP  IE+VEVAPP+  EVR+K++   +C TD +       +PL P I GHEA GIVESVGEGVT ++PGD V+P+FT +C +C  C S E N C    ++  RG +  DG  RF+ +GKPI+HFVGTSTFS+YTV     VAKI+ A+PL+KVC++ CG ST
Sbjct:    3 TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVSPL-PAILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKSPEGNYCVKNDLSNPRGTL-QDGTRRFTCRGKPIHHFVGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 179          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH1B_PANTR (Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH1B PE=2 SV=3)

HSP 1 Score: 198.364 bits (503), Expect = 2.213e-50
Identity = 98/179 (54.75%), Postives = 126/179 (70.39%), Query Frame = 1
Query:   46 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            TAG+VI+CKAAV WE  KP  IE+VEVAPP+  EVR+K++   +C TD +       TPL P I GHEA GIVESVGEGVT ++PGD V+P+FT +C +C  C + ESN C    +   RG +  DG  RF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG ST
Sbjct:    3 TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PAILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTL-QDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 179          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH1E_HORSE (Alcohol dehydrogenase E chain OS=Equus caballus PE=1 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 3.774e-50
Identity = 99/179 (55.31%), Postives = 128/179 (71.51%), Query Frame = 1
Query:   46 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            TAG+VI+CKAAV WE  KP  IEEVEVAPP+ +EVR+K++ T +C +D +       TPL P I GHEA GIVES+GEGVT ++PGD V+P+FT +C +C  C   E N C    ++  RG M  DG SRF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG ST
Sbjct:    3 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 179          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH1B_HUMAN (Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B PE=1 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 3.774e-50
Identity = 98/179 (54.75%), Postives = 126/179 (70.39%), Query Frame = 1
Query:   46 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            TAG+VI+CKAAV WE  KP  IE+VEVAPP+  EVR+K++   +C TD +       TPL P I GHEA GIVESVGEGVT ++PGD V+P+FT +C +C  C + ESN C    +   RG +  DG  RF+ +GKPI+HF+GTSTFS+YTV     VAKI+ A+PL+KVC++ CG ST
Sbjct:    3 TAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTL-QDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 179          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHX_MYXGL (Alcohol dehydrogenase class-3 OS=Myxine glutinosa PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.930e-50
Identity = 91/177 (51.41%), Postives = 123/177 (69.49%), Query Frame = 1
Query:   52 GQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            GQVI CKAAVAWEA KPL +EE+EVAPP+ +EVR+K+L T++CHTD Y          FP + GHE  GIVESVGEGVT  +PGD V+P++  +C EC  C + ++N+C  + +   +G M+ DG SR + +GK +YHF+G STFSEY V     + ++ P AP D+VC+L CG+ST
Sbjct:    5 GQVIHCKAAVAWEAKKPLSLEEIEVAPPKAHEVRMKVLATAVCHTDAYTLSGVDPEGSFPVVLGHEGAGIVESVGEGVTKFKPGDSVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-MMPDGTSRLTCRGKSLYHFMGASTFSEYAVVADISLCRVAPEAPPDRVCLLGCGVST 180          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH1_STRCA (Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH1 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 4.930e-50
Identity = 100/179 (55.87%), Postives = 125/179 (69.83%), Query Frame = 1
Query:   46 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            TAG+VI+CKAAV WE  KP  IEEVEVAPP+ +EVR+KI+ T +C +D +        P FP I GHEA G+VESVGEGVT ++PGD V+P+F  +C EC  C S + N+C    I     +M  DG SRF+ KGK I+HF GTSTF+EYTV H   VAKI+ AAPL+KVC++ CG ST
Sbjct:    2 TAGKVIKCKAAVLWEPKKPFSIEEVEVAPPKAHEVRVKIIATGICRSDDHVISGVLVMP-FPIILGHEAAGVVESVGEGVTSVKPGDKVIPLFVPQCGECSVCLSTKGNLCRKNDIGPASALM-PDGTSRFTCKGKAIHHFAGTSTFTEYTVLHETAVAKIDAAAPLEKVCLIGCGFST 178          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH7_HUMAN (Alcohol dehydrogenase class 4 mu/sigma chain OS=Homo sapiens GN=ADH7 PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 6.438e-50
Identity = 98/180 (54.44%), Postives = 128/180 (71.11%), Query Frame = 1
Query:   43 GTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            GTAG+VI+CKAAV WE  +P  IEE+EVAPP+  EVR+KIL T +C TD +  +       FP I GHEA GIVES+GEGVT ++PGD V+P+F  +C+EC  C + + N+C    I T RGV+  DG +RF+ KGKP++HF+ TSTF+EYTV     VAKI+ AAP +KVC++ CG ST
Sbjct:    2 GTAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGT-MVSKFPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDI-TGRGVLA-DGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFST 178          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH1_GEOAT (Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH1 PE=2 SV=3)

HSP 1 Score: 196.823 bits (499), Expect = 6.438e-50
Identity = 97/179 (54.19%), Postives = 127/179 (70.95%), Query Frame = 1
Query:   46 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            TAG+VI+C+AAV WE  KP  IEEVEVAPP+  EVR+KI+ T +C +D +       TPL P I GHEAGGIVES+GEGVT ++PGD V+P+F  +C +C  C   ESN+C    +   +G ++ DG SRF+ KGKPI+HF+G +TFSEYTV     V KI+ A+PL+KVC++ CG ST
Sbjct:    3 TAGKVIKCRAAVLWEKNKPFSIEEVEVAPPKAYEVRIKIVATGICRSDDHVVNGSIITPL-PAILGHEAGGIVESIGEGVTTVKPGDKVIPLFVPQCGKCRACKHPESNLCTHGDLGRAQGTLM-DGTSRFTCKGKPIHHFLGVTTFSEYTVVSEISVTKIDAASPLEKVCLIGCGFST 179          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH1_COTJA (Alcohol dehydrogenase 1 OS=Coturnix coturnix japonica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 6.438e-50
Identity = 96/179 (53.63%), Postives = 127/179 (70.95%), Query Frame = 1
Query:   46 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            TAG+VI+CKAAV WEA KP  +EEVEVAPP+ +EVR+KI+ T +C +D +        P FP I GHEA G+VESVGE VT L+PGD V+P+F  +C EC  C S + N+C    +++    ++ DG +RF+ KGK I+HF+GTSTF+EYTV H    AKI+ AAPL+KVC++ CG ST
Sbjct:    2 TAGKVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMP-FPVILGHEAAGVVESVGEKVTLLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRFTCKGKAIHHFIGTSTFTEYTVVHETAAAKIDSAAPLEKVCLIGCGFST 179          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH1_CHICK (Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 PE=1 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 6.438e-50
Identity = 95/179 (53.07%), Postives = 126/179 (70.39%), Query Frame = 1
Query:   46 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            T G+VI+CKAAV WEA KP  +EEVEVAPP+ +EVR+KI+ T +C +D +        P FP I GHEA G++ESVGE VT L+PGD V+P+F  +C EC  C S + N+C    +++    ++ DG +RF+ KGK I+HFVGTSTF+EYTV H    AKI+ AAPL+KVC++ CG ST
Sbjct:    3 TVGKVIKCKAAVLWEANKPFSLEEVEVAPPKAHEVRIKIVATGICRSDDHVVTGALAMP-FPIILGHEAAGVIESVGEKVTSLKPGDAVIPLFVPQCGECRSCLSTKGNLCIKNDLSSSPTGLMADGTTRFTCKGKAIHHFVGTSTFTEYTVVHETAAAKIDSAAPLEKVCLIGCGFST 180          
The following BLAST results are available for this feature:
BLAST of CN185310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
ADH1B_PAPHA2.213e-5054.75Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH... [more]
ADH1B_PANTR2.213e-5054.75Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH... [more]
ADH1E_HORSE3.774e-5055.31Alcohol dehydrogenase E chain OS=Equus caballus PE... [more]
ADH1B_HUMAN3.774e-5054.75Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B ... [more]
ADHX_MYXGL4.930e-5051.41Alcohol dehydrogenase class-3 OS=Myxine glutinosa ... [more]
ADH1_STRCA4.930e-5055.87Alcohol dehydrogenase 1 OS=Struthio camelus GN=ADH... [more]
ADH7_HUMAN6.438e-5054.44Alcohol dehydrogenase class 4 mu/sigma chain OS=Ho... [more]
ADH1_GEOAT6.438e-5054.19Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH... [more]
ADH1_COTJA6.438e-5053.63Alcohol dehydrogenase 1 OS=Coturnix coturnix japon... [more]
ADH1_CHICK6.438e-5053.07Alcohol dehydrogenase 1 OS=Gallus gallus GN=ADH1 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001C06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185310 ID=CN185310; Name=CN185310; organism=Citrus sinensis; type=EST; length=583bp
AGGCAGGTGTTGAGAGTATCATCATTCATCATCAATATGTCTGGCACAGC
TGGTCAAGTTATTCGCTGCAAAGCGGCGGTGGCATGGGAGGCGGGGAAGC
CACTGGTGATTGAAGAAGTGGAGGTGGCTCCACCACAGAAAAATGAAGTT
CGATTGAAGATCCTCTTCACCTCTTTATGCCATACTGATGTTTACTTCTG
GGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCATTTTTGGTCACGAAG
CTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTAACTGATCTCCAACCA
GGAGACCATGTTCTTCCTGTGTTCACAGGAGAGTGCAAGGAATGTCCTCA
CTGTCATTCAGAGGAAAGCAATATGTGTGACCTCCTCACGATCAATACTG
ACAGGGGTGTTATGATTAATGATGGTCAGTCGAGATTCTCGATTAAGGGG
AAGCCAATTTACCATTTTGTGGGCACTTCTACCTTCAGTGAATACACTGT
TACCCATGTCGGTTGTGTTGCTAAGATCAATCCTGCTGCCCCTCTTGACA
AAGTTTGTGTGCTTAGCTGTGGAATCTCCACAG
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