CN185285
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 9.712e-76 Identity = 130/196 (66.33%), Postives = 148/196 (75.51%), Query Frame = 1 Query: 115 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG--SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696 G W +AHATFY YGNLYS+GYG NTAALSTALFNNG+SCG+CFE+KC+NDP WC PG SI +TATNFC GGWCNPP++HFDL+ P+F IA+YKAGIVPVSYRR+PC +KGGIRFTING YFNLVL+TNV GAGDV VS+KGS T W +SRNWGQNWQSN+ L GQSLS Sbjct: 29 GGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLS 224
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 2.164e-75 Identity = 131/196 (66.84%), Postives = 147/196 (75.00%), Query Frame = 1 Query: 115 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG--SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696 G W +AHATFY YGNLYS+GYG NTAALSTALFNNG SCGACFEIKC +DPRWC PG SI VTATNFC GGWCNPP++HFDL+ P+F +I Y+AGIVPVSYRRVPC + GGIRFT+NG YFNLVL+TNV GAGD+ VS+KGS+TDW MSRNWGQNWQSN+ L GQSLS Sbjct: 33 GGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLS 228
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 281.567 bits (719), Expect = 2.826e-75 Identity = 129/193 (66.84%), Postives = 149/193 (77.20%), Query Frame = 1 Query: 121 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTD-WQPMSRNWGQNWQSNSYLNGQSLS 696 GW HATFY YGNL+S+GYG TAALSTALFN+G CGACFE++C +DP WC PGSI V+ATNFC GGWCNPP +HFDL++P F QIAQY+AGIVPV++RRVPC + GGIRFTING+ YF+LVLITNVGGAGD+RAVS+KGS+TD WQ MSRNWGQNWQSN+YL GQSLS Sbjct: 31 GWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLS 223
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 1.832e-74 Identity = 133/192 (69.27%), Postives = 148/192 (77.08%), Query Frame = 1 Query: 124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696 W +AHATFY YGNLYS+GYG TAALSTALF+ G+SCGACFE+ CVNDP+WC G SI VTATNFC GG C+PP HFDLSQP++E+IA YK+GI+PV YRRV C R GGIRFTINGHSYFNLVL+TNVGGAGDV +VS+KGSRT WQ MSRNWGQNWQSNSYLNGQSLS Sbjct: 38 WINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFCPP--------GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLS 221
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 276.944 bits (707), Expect = 6.960e-74 Identity = 126/196 (64.29%), Postives = 146/196 (74.49%), Query Frame = 1 Query: 115 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGS--IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696 G GW AHATFY YGNLYS+GYG NTAALSTALFNNG SCGACFE+KC +DP+WC GS IF+TATNFC GGWCNPP+ HFDL+ P+F +IA+Y+AGIVPVS+RRVPC ++GGIRFTING YFNLVL+TNV GAG++ + +KG+ T W MSRNWGQNWQSNS L GQSLS Sbjct: 28 GGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLS 223
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 2.645e-73 Identity = 131/200 (65.50%), Postives = 145/200 (72.50%), Query Frame = 1 Query: 112 YGQG-WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDP--RWCRPGS--IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696 YG G W AHATFY YGNLYS+GYG N AALSTALFN+G SCGACFEIKCVN P WC PGS I +TATNFC GGWCNPP+ HFDL+ P+F IA+Y+AGIVPVSYRRVPC +KGG+RFTING YFNLVLITNV GAGD+ S+KG+ T W PMSRNWGQNWQSNS L GQ+LS Sbjct: 31 YGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALS 230
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 273.092 bits (697), Expect = 1.005e-72 Identity = 129/198 (65.15%), Postives = 149/198 (75.25%), Query Frame = 1 Query: 115 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCV---NDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT-DWQPMSRNWGQNWQSNSYLNGQSLS 696 G GW+ AHATFY YGNLYS+GYGTNTAALSTALFNNG+SCGACFE++C C PGS+ VTATNFC GGWCNPP+ HFD+SQPVF++IA +KAGIVPVSYRRV C +KGGIRFTINGHSYFNLVL+TNVGGAGDV AV++K R+ WQ +SRNWGQNWQS + L+GQ+LS Sbjct: 61 GGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALS 258
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.150e-68 Identity = 120/200 (60.00%), Postives = 151/200 (75.50%), Query Frame = 1 Query: 124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRW-CRPG--SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTD------WQPMSRNWGQNWQSNSYLNGQSLS 696 W HATFY YGNLYS+GYGT+TAALSTALFN G+SCG+C+E++C D R C PG ++ VTATNFC GGWCNPP++HFDL++P F +IA++ AGIVPVS+RRV C+RKGG+RFT+NGH+YFNLVL+TNVGGAGDVR++++KGS + WQPMSRNWGQNWQSN+YL+G++LS Sbjct: 28 WQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALS 227
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 4.090e-66 Identity = 120/193 (62.18%), Postives = 136/193 (70.47%), Query Frame = 1 Query: 124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC-VNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696 WT A ATFY YG+LY GYGT TAALSTALFN G SCGACF I C +WC+PG SI VTATNFC GGWCNPP++HFD+SQP +E IA Y+AGIVPV+YRRVPC R GGIRF +NGHSYF LVL+TNVGG+G V + IKGS T W MSRNWG NWQSN+ L+GQ+LS Sbjct: 25 WTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGTSITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALS 217
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 251.136 bits (640), Expect = 4.090e-66 Identity = 116/192 (60.42%), Postives = 138/192 (71.88%), Query Frame = 1 Query: 121 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696 GW+ ATFY YGNLYS GYGT+TAALSTALFNNG SCGACFE++C C G++ VTATN C GGWCNPP+ HFD+++P F +IAQ +AG+VPV YRRV C+++GGIRFTI GHSYFNLVL+TNVGGAGDV AVS+KGSR+ WQ MS NWG NWQ+ + L+GQ LS Sbjct: 26 GWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAVTATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLS 216 The following BLAST results are available for this feature:
BLAST of CN185285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185285 ID=CN185285; Name=CN185285; organism=Citrus sinensis; type=EST; length=696bpback to top |