CN185285

Overview
NameCN185285
Unique NameCN185285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 9.712e-76
Identity = 130/196 (66.33%), Postives = 148/196 (75.51%), Query Frame = 1
Query:  115 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG--SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            G  W +AHATFY              YGNLYS+GYG NTAALSTALFNNG+SCG+CFE+KC+NDP WC PG  SI +TATNFC          GGWCNPP++HFDL+ P+F  IA+YKAGIVPVSYRR+PC +KGGIRFTING  YFNLVL+TNV GAGDV  VS+KGS T W  +SRNWGQNWQSN+ L GQSLS
Sbjct:   29 GGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLS 224          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.164e-75
Identity = 131/196 (66.84%), Postives = 147/196 (75.00%), Query Frame = 1
Query:  115 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG--SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            G  W +AHATFY              YGNLYS+GYG NTAALSTALFNNG SCGACFEIKC +DPRWC PG  SI VTATNFC          GGWCNPP++HFDL+ P+F +I  Y+AGIVPVSYRRVPC + GGIRFT+NG  YFNLVL+TNV GAGD+  VS+KGS+TDW  MSRNWGQNWQSN+ L GQSLS
Sbjct:   33 GGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLS 228          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 281.567 bits (719), Expect = 2.826e-75
Identity = 129/193 (66.84%), Postives = 149/193 (77.20%), Query Frame = 1
Query:  121 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTD-WQPMSRNWGQNWQSNSYLNGQSLS 696
            GW   HATFY              YGNL+S+GYG  TAALSTALFN+G  CGACFE++C +DP WC PGSI V+ATNFC          GGWCNPP +HFDL++P F QIAQY+AGIVPV++RRVPC + GGIRFTING+ YF+LVLITNVGGAGD+RAVS+KGS+TD WQ MSRNWGQNWQSN+YL GQSLS
Sbjct:   31 GWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRRVPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQSLS 223          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.832e-74
Identity = 133/192 (69.27%), Postives = 148/192 (77.08%), Query Frame = 1
Query:  124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            W +AHATFY              YGNLYS+GYG  TAALSTALF+ G+SCGACFE+ CVNDP+WC  G SI VTATNFC          GG C+PP  HFDLSQP++E+IA YK+GI+PV YRRV C R GGIRFTINGHSYFNLVL+TNVGGAGDV +VS+KGSRT WQ MSRNWGQNWQSNSYLNGQSLS
Sbjct:   38 WINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFCPP--------GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLS 221          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 276.944 bits (707), Expect = 6.960e-74
Identity = 126/196 (64.29%), Postives = 146/196 (74.49%), Query Frame = 1
Query:  115 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGS--IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            G GW  AHATFY              YGNLYS+GYG NTAALSTALFNNG SCGACFE+KC +DP+WC  GS  IF+TATNFC          GGWCNPP+ HFDL+ P+F +IA+Y+AGIVPVS+RRVPC ++GGIRFTING  YFNLVL+TNV GAG++  + +KG+ T W  MSRNWGQNWQSNS L GQSLS
Sbjct:   28 GGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIVRLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLS 223          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.645e-73
Identity = 131/200 (65.50%), Postives = 145/200 (72.50%), Query Frame = 1
Query:  112 YGQG-WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDP--RWCRPGS--IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            YG G W  AHATFY              YGNLYS+GYG N AALSTALFN+G SCGACFEIKCVN P   WC PGS  I +TATNFC          GGWCNPP+ HFDL+ P+F  IA+Y+AGIVPVSYRRVPC +KGG+RFTING  YFNLVLITNV GAGD+   S+KG+ T W PMSRNWGQNWQSNS L GQ+LS
Sbjct:   31 YGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALS 230          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.005e-72
Identity = 129/198 (65.15%), Postives = 149/198 (75.25%), Query Frame = 1
Query:  115 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCV---NDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT-DWQPMSRNWGQNWQSNSYLNGQSLS 696
            G GW+ AHATFY              YGNLYS+GYGTNTAALSTALFNNG+SCGACFE++C         C PGS+ VTATNFC          GGWCNPP+ HFD+SQPVF++IA +KAGIVPVSYRRV C +KGGIRFTINGHSYFNLVL+TNVGGAGDV AV++K  R+  WQ +SRNWGQNWQS + L+GQ+LS
Sbjct:   61 GGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALS 258          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.150e-68
Identity = 120/200 (60.00%), Postives = 151/200 (75.50%), Query Frame = 1
Query:  124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRW-CRPG--SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTD------WQPMSRNWGQNWQSNSYLNGQSLS 696
            W   HATFY              YGNLYS+GYGT+TAALSTALFN G+SCG+C+E++C  D R  C PG  ++ VTATNFC          GGWCNPP++HFDL++P F +IA++ AGIVPVS+RRV C+RKGG+RFT+NGH+YFNLVL+TNVGGAGDVR++++KGS +       WQPMSRNWGQNWQSN+YL+G++LS
Sbjct:   28 WQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHAAGIVPVSFRRVACARKGGVRFTVNGHAYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALS 227          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 4.090e-66
Identity = 120/193 (62.18%), Postives = 136/193 (70.47%), Query Frame = 1
Query:  124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC-VNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            WT A ATFY              YG+LY  GYGT TAALSTALFN G SCGACF I C     +WC+PG SI VTATNFC          GGWCNPP++HFD+SQP +E IA Y+AGIVPV+YRRVPC R GGIRF +NGHSYF LVL+TNVGG+G V  + IKGS T W  MSRNWG NWQSN+ L+GQ+LS
Sbjct:   25 WTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGTSITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALS 217          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 4.090e-66
Identity = 116/192 (60.42%), Postives = 138/192 (71.88%), Query Frame = 1
Query:  121 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            GW+   ATFY              YGNLYS GYGT+TAALSTALFNNG SCGACFE++C      C  G++ VTATN C          GGWCNPP+ HFD+++P F +IAQ +AG+VPV YRRV C+++GGIRFTI GHSYFNLVL+TNVGGAGDV AVS+KGSR+ WQ MS NWG NWQ+ + L+GQ LS
Sbjct:   26 GWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAVTATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQARAGVVPVQYRRVACAKQGGIRFTITGHSYFNLVLVTNVGGAGDVTAVSVKGSRSGWQAMSHNWGANWQNGANLDGQPLS 216          
The following BLAST results are available for this feature:
BLAST of CN185285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
EXPA9_ARATH9.712e-7666.33Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 ... [more]
EXPA3_ARATH2.164e-7566.84Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 ... [more]
EXPA2_ARATH2.826e-7566.84Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 ... [more]
EXPA5_ARATH1.832e-7469.27Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 ... [more]
EXPA6_ARATH6.960e-7464.29Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 ... [more]
EXPA7_ORYSJ2.645e-7365.50Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA5_ORYSJ1.005e-7265.15Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA6_ORYSJ1.150e-6860.00Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA8_ORYSJ4.090e-6662.18Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP11_ORYSJ4.090e-6660.42Expansin-A11 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001B16_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001B16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185285 ID=CN185285; Name=CN185285; organism=Citrus sinensis; type=EST; length=696bp
ATGAGAACCTCTCTTTCTCTCTTAAAAAAGATACGCAAGCAAAAGGGTTT
CAGGAACATGGCATTTCTTGGGCTGCTGTTGTTGGGGATTCTTTCTTTAG
TCTCATCTGTTTATGGCCAGGGATGGACTGATGCTCATGCCACTTTTTAT
GGTGGGGGTGATGCCTCTGGTACAATGGGTGGCGCTTGTGGGTATGGAAA
CTTATACAGCGAGGGATATGGGACAAACACAGCAGCTCTGAGCACTGCGC
TTTTCAACAATGGCATGAGCTGTGGGGCTTGTTTTGAGATCAAGTGTGTT
AATGACCCAAGATGGTGCCGTCCGGGCTCCATTTTTGTTACTGCCACAAA
TTTTTGCCCTCCAAATAATGCTCTCCCAAACAATGCCGGTGGCTGGTGCA
ATCCTCCCCAGCAACATTTTGACCTCTCTCAGCCTGTGTTTGAACAAATT
GCTCAGTACAAAGCTGGGATAGTACCTGTGTCTTACAGAAGGGTTCCATG
CAGTAGGAAGGGAGGCATCAGATTCACGATCAACGGCCATTCTTACTTCA
ACTTAGTCCTAATCACAAACGTCGGAGGCGCTGGTGATGTGCGTGCTGTT
TCAATCAAAGGGTCAAGAACTGATTGGCAACCCATGTCAAGGAACTGGGG
TCAAAACTGGCAAAGTAACAGTTACCTCAATGGCCAAAGCCTCTCA
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