CN185285

Overview
NameCN185285
Unique NameCN185285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 4.680e-62
Identity = 110/195 (56.41%), Postives = 134/195 (68.72%), Query Frame = 1
Query:  124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVND--PRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSR-TDWQPMSRNWGQNWQSNSYLNGQSLS 696
            W  AHATFY              Y +LYS+GYGT  AALSTALFN+G SCG C++I C     P+WC+PG ++ VTATNFC          GGWCNPP+ HFD++QP +E+I  Y+AGI+PV Y+RVPC +KGG+RFTINGH YFNLVL+TNV   G ++++ I GS  TDW PM RNWG NW S SYL GQ LS
Sbjct:   50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTVTATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQMLS 244          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.112e-62
Identity = 112/195 (57.44%), Postives = 136/195 (69.74%), Query Frame = 1
Query:  121 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVN--DPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            G T+ HATFY              YG+LYS GYGT TAALSTALFN+G SCG C+ I C +  D RWC  G S+ +TATNFC          GGWCNPP +HFD++QP +E+I  Y+ GIVPV ++RV C +KGG+RF ING  YF LV I NVGGAG +++VSIKGS+T W  MSRNWG NWQSN+YL+GQ+LS
Sbjct:   25 GLTNGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKGASVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIKGSKTGWLAMSRNWGANWQSNAYLDGQALS 219          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 3.033e-61
Identity = 110/195 (56.41%), Postives = 133/195 (68.21%), Query Frame = 1
Query:  118 QGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC-VNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            Q WT A ATFY              YGN+YS GYGTNT ALS+AL+ +G SCGAC+ + C  +  RWC+ G S+ VTATN+C          GGWCNPP++HFD+SQP +E IA Y +GIVPV Y R PC R GGIRF I GH Y+ LVL+TNV G+G V A  +KGS T+W  MSRNWG+NWQSN+YL GQ+LS
Sbjct:   25 QQWTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALS 219          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 3.962e-61
Identity = 109/197 (55.33%), Postives = 135/197 (68.53%), Query Frame = 1
Query:  121 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVN--DPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSR--TDWQPMSRNWGQNWQSNSYLNGQSLS 696
            GW+   ATFY              YGNLY++GYGT TAALSTALF++G SCG C+ + C    DPRWCR G S+ VTATNFC          GGWCNPP+ HFD++QP +E+I  Y+ GIVPV++RRVPC R+GG+RFT+ G  YF LVL+TNV  AG VR++ ++GSR    W  MSRNWG NWQS +YL+GQ LS
Sbjct:   33 GWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAGASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSRRGAGWMAMSRNWGANWQSLAYLDGQGLS 229          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 8.825e-61
Identity = 103/191 (53.93%), Postives = 131/191 (68.59%), Query Frame = 1
Query:  124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            W DA ATFY              YG+L+ +GYG  TAALSTALFN G +CGAC++I CVNDP+WC PGS+ +TATNFC          G WCNPPQ+HFDLS P+F +IAQYKAG+VPV YRR+ C+R GG++F   G+ YF ++L  NVGGAGD++ + +KG +T W  M +NWGQNW +   L GQ +S
Sbjct:   48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPDYSKTE--GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGIS 236          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 8.825e-61
Identity = 105/191 (54.97%), Postives = 132/191 (69.11%), Query Frame = 1
Query:  124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            W DA ATFY              YGNL+ +GYG  TAALSTALFN+G +CGAC+EI C  DP+WC PGS+ +TATNFC            WCNPPQ+HFDLS  +F +IA+YKAG+VPV YRR+PCS+ GG++F   G+ YF +VLI NVGGAGD++ V +KG++T W  M +NWGQNW + + L GQ LS
Sbjct:   52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLS 240          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 2.568e-60
Identity = 104/191 (54.45%), Postives = 132/191 (69.11%), Query Frame = 1
Query:  124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            W DA ATFY              YGNL+ +GYG  TAALSTALFN+G +CGAC+EI C  DP+WC PGS+ +TATNFC            WCNPPQ+HFDLS  +F +IA+YKAG+VPV YRR+PCS+ GG++F   G+ YF +VLI NVGGAGD++ V +K ++T W  M +NWGQNW +++ L GQ LS
Sbjct:   58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVKFETKGNPYFLMVLIYNVGGAGDIKYVQVKENKTGWITMKKNWGQNWTTSTVLTGQGLS 246          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 5.720e-60
Identity = 102/191 (53.40%), Postives = 131/191 (68.59%), Query Frame = 1
Query:  124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            W DA ATFY              YG+L+ +GYG  TAALSTALFN G +CGAC++I CV+DP+WC PG+I +TATNFC          G WCNPPQ+HFDLS P+F +IAQYKAG+VPV YRR+ C+R GG++F   G+ YF ++L  NVGGAGD++ + +KG +T W  M +NWGQNW +   L GQ +S
Sbjct:   55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNFCPPDYSKTE--GVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGIS 243          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 8.260e-59
Identity = 105/192 (54.69%), Postives = 130/192 (67.71%), Query Frame = 1
Query:  121 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            GW    ATFY              YG+L+ +GYG  TAALSTALFNNG  CGAC+EI C + P+WC PGSI +TATNFC            WCNPPQ+HFDLSQP+F +IA+YKAG+VPV +RRVPC++ GG++F I G+ +F ++L  NVGGAG VRA+ IKG+RT W  M +NWGQ W +   L GQ LS
Sbjct:   89 GWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNFCPPDFTKPND--NWCNPPQKHFDLSQPMFLKIAKYKAGVVPVKFRRVPCAKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTGVVLTGQCLS 278          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2)

HSP 1 Score: 226.098 bits (575), Expect = 1.409e-58
Identity = 105/195 (53.85%), Postives = 131/195 (67.18%), Query Frame = 1
Query:  121 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRPGS-IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            GW    ATFY              YGNLY++GYG   AALSTALFN G SCG C+ I C     P WC+ G+ + +TATN C          GGWCNPP+ HFD+SQP +E I  Y+AGIVPV Y++V C R+GG+RFT++G +YF LVLITNV G+G V+A+S+KGS+T W P++RNWG NWQ NS L GQ+LS
Sbjct:   26 GWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGTAVTITATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQVKCWRQGGVRFTVSGFNYFELVLITNVAGSGSVQAMSVKGSKTGWIPLARNWGANWQCNSALVGQALS 220          
The following BLAST results are available for this feature:
BLAST of CN185285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
EXP24_ORYSJ4.680e-6256.41Expansin-A24 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP11_ARATH6.112e-6257.44Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=... [more]
EXPA9_ORYSJ3.033e-6156.41Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP29_ORYSJ3.962e-6155.33Expansin-A29 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP23_ARATH8.825e-6153.93Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=... [more]
EXP22_ARATH8.825e-6154.97Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=... [more]
EXP26_ARATH2.568e-6054.45Putative expansin-A26 OS=Arabidopsis thaliana GN=E... [more]
EXP25_ARATH5.720e-6053.40Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=... [more]
EXP24_ARATH8.260e-5954.69Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=... [more]
EXP28_ORYSJ1.409e-5853.85Expansin-A28 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001B16_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001B16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185285 ID=CN185285; Name=CN185285; organism=Citrus sinensis; type=EST; length=696bp
ATGAGAACCTCTCTTTCTCTCTTAAAAAAGATACGCAAGCAAAAGGGTTT
CAGGAACATGGCATTTCTTGGGCTGCTGTTGTTGGGGATTCTTTCTTTAG
TCTCATCTGTTTATGGCCAGGGATGGACTGATGCTCATGCCACTTTTTAT
GGTGGGGGTGATGCCTCTGGTACAATGGGTGGCGCTTGTGGGTATGGAAA
CTTATACAGCGAGGGATATGGGACAAACACAGCAGCTCTGAGCACTGCGC
TTTTCAACAATGGCATGAGCTGTGGGGCTTGTTTTGAGATCAAGTGTGTT
AATGACCCAAGATGGTGCCGTCCGGGCTCCATTTTTGTTACTGCCACAAA
TTTTTGCCCTCCAAATAATGCTCTCCCAAACAATGCCGGTGGCTGGTGCA
ATCCTCCCCAGCAACATTTTGACCTCTCTCAGCCTGTGTTTGAACAAATT
GCTCAGTACAAAGCTGGGATAGTACCTGTGTCTTACAGAAGGGTTCCATG
CAGTAGGAAGGGAGGCATCAGATTCACGATCAACGGCCATTCTTACTTCA
ACTTAGTCCTAATCACAAACGTCGGAGGCGCTGGTGATGTGCGTGCTGTT
TCAATCAAAGGGTCAAGAACTGATTGGCAACCCATGTCAAGGAACTGGGG
TCAAAACTGGCAAAGTAACAGTTACCTCAATGGCCAAAGCCTCTCA
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