CN185285

Overview
NameCN185285
Unique NameCN185285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.139e-58
Identity = 104/194 (53.61%), Postives = 129/194 (66.49%), Query Frame = 1
Query:  124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGS--IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGS-RTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            W  AHATFY              Y +   EGYG  T A+ST LF  G  CGAC+E+KCV+ P  C+ G+  + VTATN C          GGWCNPP++HFDLS P F QIAQ KAGIVP+SYRRVPC + GGIR+TI G+ YFNLV+++NVGGAGDV  +S+KG+ R  W P+ RNWGQ WQ++  L G+SL+
Sbjct:   42 WKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLT 235          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.035e-57
Identity = 102/195 (52.31%), Postives = 134/195 (68.72%), Query Frame = 1
Query:  121 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVN--DPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            GW+   ATFY              YGNLY  GYGTNTAALS+ALFN+G SCG C++I C +  +PRWC  G ++ +T TN C          GGWCNPP+ HFD+++P + QI  YKAGIVPV Y+RVPC ++GG+RFT+ G +YF LVLI+NV G+G +++V +KG  TD  P+SRNWG NWQS++ L GQ+L+
Sbjct:   31 GWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLT 225          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 5.920e-57
Identity = 105/194 (54.12%), Postives = 128/194 (65.98%), Query Frame = 1
Query:  124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDP--RWCRP-GSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            W  A ATFY              YGNLY +GYG   AALSTALFN+G +CG C+ I C  D   RWC+P G++ VTATN C          GGWCNPP++HFD+SQP +E+I  Y+AGIVPV YRRV C R+GG+RFT+ G  +F LVL+ NV G+G V AVS++G+ T W  MSRNWG NWQS + L GQ LS
Sbjct:   27 WIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRGAVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAGLAGQPLS 220          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 1.722e-56
Identity = 102/195 (52.31%), Postives = 130/195 (66.67%), Query Frame = 1
Query:  121 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRPGS-IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            GW    ATFY              YGNLY+ GYGTNTAALS+ LFN+G SCG C+ I C     P+WCR G+ + +TATN C          GGWCNPP+ HFD+++P + QI  YKAGI+PV Y++V C R+GGIRFT+ G ++F LVL++NV G+G VR+VS+KG  T W  ++RNWG NWQ NS L GQ+LS
Sbjct:   26 GWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQCNSGLVGQALS 220          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 1.458e-55
Identity = 105/194 (54.12%), Postives = 128/194 (65.98%), Query Frame = 1
Query:  124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVND--PRWCRPGS-IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            W+ A ATFY              YGNLY +GYG + AALS ALFN+G SCG C+ I C     P+WC+ G+ + VTATN C          GGWCNPP+ HFD+SQP +EQI  Y+AGIVPV Y+RV C R+GG+RFT+ G +YF LVLITNV G+G V +  IKG+ T W  MSRNWG NWQS + L GQ+LS
Sbjct:   28 WSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALS 221          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.487e-55
Identity = 97/191 (50.79%), Postives = 127/191 (66.49%), Query Frame = 1
Query:  124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            W  AHATFY              YGNL++ GYG +TAALST LFN+G  CG CF+I C   P      S  VTATN C          GGWCNPP+ HFD+++P F ++A ++AGI+PV+YRRVPC R GG+RF   G+SY+ L+ + NVGGAGD++++++KGSRT+W  MS NWG ++Q+ S L GQSLS
Sbjct:   37 WRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLS 227          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.045e-53
Identity = 102/196 (52.04%), Postives = 125/196 (63.78%), Query Frame = 1
Query:  115 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGS--IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            G  W  A ATFY              YGN+Y  GYG  T ALSTALFN G +CG CF++KCV+ P  C  GS    VTATN C          GGWCNPP+ HFDL++P F +IA +KAGI+PVSYRRV C + GGIRF   G+ Y+ LV + NVGG GD++ +++KGSRT W  MS NWG ++Q+ S L GQSLS
Sbjct:   28 GTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLS 222          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 1.971e-52
Identity = 99/192 (51.56%), Postives = 119/192 (61.98%), Query Frame = 1
Query:  124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            W  A AT+Y              YG+L   GYG  T  LS  LF  G  CGACFE++CV+D RWC PG SI +TATNFC          GG CNPP +HF L    FE+IA +KAG +PV YRR+ C ++G +RFT++G   F  VLITNV G+GD+ AV IKGSRT W PM RNWGQNW  N+ L  Q+LS
Sbjct:   40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALS 231          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 9.780e-52
Identity = 102/195 (52.31%), Postives = 122/195 (62.56%), Query Frame = 1
Query:  121 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVND--PRWCRPGS-IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            GW    ATFY              YGNLY +GYG N AALST LFNNG SCG C+ I C  D  P  CR G+ I VT TNFC          GGWCN  + HFD+SQP +E I  Y AGIVP+ Y++V C R GG+RFTI G +YF LVL+TN+ G+G + ++S+KGS T W  MSRNWG NWQ  + L GQ+LS
Sbjct:   22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNFCPPNYDLPY--GGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALS 214          
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.409e-50
Identity = 97/194 (50.00%), Postives = 122/194 (62.89%), Query Frame = 1
Query:  124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696
            W    ATFY              YGNLY +GYG N AALST LFN+G SCG C+ I C     P WC+ G +I VT TN+C          GGWCN  + HFD+SQP +E I  Y AGI+P+ Y++V C R GG+RFTING +YF LVL+TN+ G+G + ++S+KGS T W  M+RNWG NWQ  + L GQ+LS
Sbjct:   23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPY--GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALS 214          
The following BLAST results are available for this feature:
BLAST of CN185285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
EXP32_ORYSJ3.139e-5853.61Expansin-A32 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP15_ORYSJ2.035e-5752.31Expansin-A15 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP27_ORYSJ5.920e-5754.12Putative expansin-A27 OS=Oryza sativa subsp. japon... [more]
EXP25_ORYSJ1.722e-5652.31Expansin-A25 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP31_ORYSJ1.458e-5554.12Expansin-A31 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA7_ARATH2.487e-5550.79Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 ... [more]
EXP18_ARATH1.045e-5352.04Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=... [more]
EXP13_ARATH1.971e-5251.56Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=... [more]
EXP18_ORYSJ9.780e-5252.31Expansin-A18 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP19_ORYSJ2.409e-5050.00Expansin-A19 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001B16_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001B16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185285 ID=CN185285; Name=CN185285; organism=Citrus sinensis; type=EST; length=696bp
ATGAGAACCTCTCTTTCTCTCTTAAAAAAGATACGCAAGCAAAAGGGTTT
CAGGAACATGGCATTTCTTGGGCTGCTGTTGTTGGGGATTCTTTCTTTAG
TCTCATCTGTTTATGGCCAGGGATGGACTGATGCTCATGCCACTTTTTAT
GGTGGGGGTGATGCCTCTGGTACAATGGGTGGCGCTTGTGGGTATGGAAA
CTTATACAGCGAGGGATATGGGACAAACACAGCAGCTCTGAGCACTGCGC
TTTTCAACAATGGCATGAGCTGTGGGGCTTGTTTTGAGATCAAGTGTGTT
AATGACCCAAGATGGTGCCGTCCGGGCTCCATTTTTGTTACTGCCACAAA
TTTTTGCCCTCCAAATAATGCTCTCCCAAACAATGCCGGTGGCTGGTGCA
ATCCTCCCCAGCAACATTTTGACCTCTCTCAGCCTGTGTTTGAACAAATT
GCTCAGTACAAAGCTGGGATAGTACCTGTGTCTTACAGAAGGGTTCCATG
CAGTAGGAAGGGAGGCATCAGATTCACGATCAACGGCCATTCTTACTTCA
ACTTAGTCCTAATCACAAACGTCGGAGGCGCTGGTGATGTGCGTGCTGTT
TCAATCAAAGGGTCAAGAACTGATTGGCAACCCATGTCAAGGAACTGGGG
TCAAAACTGGCAAAGTAACAGTTACCTCAATGGCCAAAGCCTCTCA
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