CN185285
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.139e-58 Identity = 104/194 (53.61%), Postives = 129/194 (66.49%), Query Frame = 1 Query: 124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGS--IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGS-RTDWQPMSRNWGQNWQSNSYLNGQSLS 696 W AHATFY Y + EGYG T A+ST LF G CGAC+E+KCV+ P C+ G+ + VTATN C GGWCNPP++HFDLS P F QIAQ KAGIVP+SYRRVPC + GGIR+TI G+ YFNLV+++NVGGAGDV +S+KG+ R W P+ RNWGQ WQ++ L G+SL+ Sbjct: 42 WKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRRVPCVKVGGIRYTITGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLT 235
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 222.246 bits (565), Expect = 2.035e-57 Identity = 102/195 (52.31%), Postives = 134/195 (68.72%), Query Frame = 1 Query: 121 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVN--DPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696 GW+ ATFY YGNLY GYGTNTAALS+ALFN+G SCG C++I C + +PRWC G ++ +T TN C GGWCNPP+ HFD+++P + QI YKAGIVPV Y+RVPC ++GG+RFT+ G +YF LVLI+NV G+G +++V +KG TD P+SRNWG NWQS++ L GQ+L+ Sbjct: 31 GWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQGGVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLT 225
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 220.705 bits (561), Expect = 5.920e-57 Identity = 105/194 (54.12%), Postives = 128/194 (65.98%), Query Frame = 1 Query: 124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDP--RWCRP-GSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696 W A ATFY YGNLY +GYG AALSTALFN+G +CG C+ I C D RWC+P G++ VTATN C GGWCNPP++HFD+SQP +E+I Y+AGIVPV YRRV C R+GG+RFT+ G +F LVL+ NV G+G V AVS++G+ T W MSRNWG NWQS + L GQ LS Sbjct: 27 WIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRGAVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAGLAGQPLS 220
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 219.164 bits (557), Expect = 1.722e-56 Identity = 102/195 (52.31%), Postives = 130/195 (66.67%), Query Frame = 1 Query: 121 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRPGS-IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696 GW ATFY YGNLY+ GYGTNTAALS+ LFN+G SCG C+ I C P+WCR G+ + +TATN C GGWCNPP+ HFD+++P + QI YKAGI+PV Y++V C R+GGIRFT+ G ++F LVL++NV G+G VR+VS+KG T W ++RNWG NWQ NS L GQ+LS Sbjct: 26 GWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQVKCWRQGGIRFTMGGFNFFELVLVSNVAGSGSVRSVSVKGGSTGWITLNRNWGANWQCNSGLVGQALS 220
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 216.083 bits (549), Expect = 1.458e-55 Identity = 105/194 (54.12%), Postives = 128/194 (65.98%), Query Frame = 1 Query: 124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVND--PRWCRPGS-IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696 W+ A ATFY YGNLY +GYG + AALS ALFN+G SCG C+ I C P+WC+ G+ + VTATN C GGWCNPP+ HFD+SQP +EQI Y+AGIVPV Y+RV C R+GG+RFT+ G +YF LVLITNV G+G V + IKG+ T W MSRNWG NWQS + L GQ+LS Sbjct: 28 WSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQRVRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNWGANWQSLAGLAGQALS 221
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.487e-55 Identity = 97/191 (50.79%), Postives = 127/191 (66.49%), Query Frame = 1 Query: 124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696 W AHATFY YGNL++ GYG +TAALST LFN+G CG CF+I C P S VTATN C GGWCNPP+ HFD+++P F ++A ++AGI+PV+YRRVPC R GG+RF G+SY+ L+ + NVGGAGD++++++KGSRT+W MS NWG ++Q+ S L GQSLS Sbjct: 37 WRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRRVPCQRSGGMRFQFQGNSYWLLIFVMNVGGAGDIKSMAVKGSRTNWISMSHNWGASYQAFSSLYGQSLS 227
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.045e-53 Identity = 102/196 (52.04%), Postives = 125/196 (63.78%), Query Frame = 1 Query: 115 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGS--IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696 G W A ATFY YGN+Y GYG T ALSTALFN G +CG CF++KCV+ P C GS VTATN C GGWCNPP+ HFDL++P F +IA +KAGI+PVSYRRV C + GGIRF G+ Y+ LV + NVGG GD++ +++KGSRT W MS NWG ++Q+ S L GQSLS Sbjct: 28 GTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLS 222
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 205.682 bits (522), Expect = 1.971e-52 Identity = 99/192 (51.56%), Postives = 119/192 (61.98%), Query Frame = 1 Query: 124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696 W A AT+Y YG+L GYG T LS LF G CGACFE++CV+D RWC PG SI +TATNFC GG CNPP +HF L FE+IA +KAG +PV YRR+ C ++G +RFT++G F VLITNV G+GD+ AV IKGSRT W PM RNWGQNW N+ L Q+LS Sbjct: 40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRRINCRKEGSMRFTVDGGGIFISVLITNVAGSGDIAAVKIKGSRTGWLPMGRNWGQNWHINADLRNQALS 231
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 203.371 bits (516), Expect = 9.780e-52 Identity = 102/195 (52.31%), Postives = 122/195 (62.56%), Query Frame = 1 Query: 121 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVND--PRWCRPGS-IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696 GW ATFY YGNLY +GYG N AALST LFNNG SCG C+ I C D P CR G+ I VT TNFC GGWCN + HFD+SQP +E I Y AGIVP+ Y++V C R GG+RFTI G +YF LVL+TN+ G+G + ++S+KGS T W MSRNWG NWQ + L GQ+LS Sbjct: 22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGTAITVTGTNFCPPNYDLPY--GGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALS 214
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.409e-50 Identity = 97/194 (50.00%), Postives = 122/194 (62.89%), Query Frame = 1 Query: 124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKC--VNDPRWCRPG-SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLS 696 W ATFY YGNLY +GYG N AALST LFN+G SCG C+ I C P WC+ G +I VT TN+C GGWCN + HFD+SQP +E I Y AGI+P+ Y++V C R GG+RFTING +YF LVL+TN+ G+G + ++S+KGS T W M+RNWG NWQ + L GQ+LS Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPY--GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALS 214 The following BLAST results are available for this feature:
BLAST of CN185285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185285 ID=CN185285; Name=CN185285; organism=Citrus sinensis; type=EST; length=696bpback to top |