CN185285
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.989e-17 Identity = 58/200 (29.00%), Postives = 88/200 (44.00%), Query Frame = 1 Query: 121 GWTDAHATFYXXXXXXXXXXXXXXY-GNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQ-------YKAGIVPVSYRRVPCSRKG---GIRFTINGHSYFNLVLITNVGGAGDVRAVSI-----KGSRTDWQPMSRNWGQNWQSNS 672 GW+ AT+Y Y G++ + + AA S +++ +G CG+C+++KC +P C + V T+ C GG C HFDLS F +A+ AG +PV Y RVPC +G R + Y+ VL+ + G GD+ AV + G W M ++WG W+ NS Sbjct: 37 GWSIGGATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPS-CSGKPVTVVLTDLC---------PGGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYNS 226
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16 Identity = 61/195 (31.28%), Postives = 85/195 (43.59%), Query Frame = 1 Query: 121 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEG-YGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQ-------YKAGIVPVSYRRVPCSRKG-GIRFTIN--GHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNS 672 GW A AT+Y Y + + + AA S +L+ G CGAC+E+KC + C V T+ C GG C HFD+S +A+ AGI+ V YRRVPC G I F ++ + ++ VLI G GD+ AV + + W PM +NWG W+ NS Sbjct: 63 GWAAAGATYYGAPNGDGSDGGACGYQTAVGQRPFSSMIAAGSPSLYKGGKGCGACYEVKCTTNAA-CSGQPATVVITDECP---------GGICLAGAAHFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWGALWRYNS 247
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.249e-14 Identity = 52/197 (26.40%), Postives = 89/197 (45.18%), Query Frame = 1 Query: 124 WTDAHATFYXXXXXXXXXXXXXXY-GNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQ-------YKAGIVPVSYRRVPCSRKGGIRFT----INGHSYFNLVLITNVGGAGDVRAVSI--KGSRTDWQPMSRNWGQNWQSNS 672 W++ AT+Y Y G ++ + + AA S +++ +G+ CG+C+++KC + C + V T+ C GG C HFDLS F +A AG++ + Y RVPC+ GG++ T + + + VL+ G GD+ V + G+ W M ++WG W+ N+ Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQGAVFQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCTGNSA-CSGNPVTVVLTDEC---------PGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCN-WGGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNA 222
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14 Identity = 57/192 (29.69%), Postives = 86/192 (44.79%), Query Frame = 1 Query: 124 WTDAHATFYXXXXXXXXXXXXXXYGNLYS-EGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIA-------QYKAGIVPVSYRRVPCSRKG-GIRFTINGHS--YFNLVLITNVGGAGDVRAVSIK--GSRTDWQPMSRNWGQNW 660 W A AT+Y YG L + A++ LF NG CGAC++++C+ D C ++ V T+ C C+ HFDLS VF ++A G++PV YRR C +G I F +N S ++ +L+ G GD+ ++ I+ G+R +W M WG NW Sbjct: 36 WLPAVATWYGSPNGDGSDGGACGYGTLVDVKPLHARVGAVNPILFKNGEGCGACYKVRCL-DKSICSRRAVTVIITDECPG-----------CSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGSTDFWLSLLVEFEDGEGDIGSMHIRQAGAR-EWLEMKHVWGANW 214
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXB11_MAIZE (Expansin-B11 OS=Zea mays GN=EXPB11 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.094e-14 Identity = 55/201 (27.36%), Postives = 91/201 (45.27%), Query Frame = 1 Query: 112 YGQGWTDAHATFYXXXXXXXXXXXXXX--YGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWC--RPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQ-------YKAGIVPVSYRRVPCSRKGGIRFTING--HSYFNLVLITNVGGAGDVRAVSIKGSRTD-WQPMSRNWGQNWQSNS 672 YG W DA AT+Y Y ++ + + A + +F +G+ CG+CFEIKC + P C +P +++T N+ HFDL+ F +A+ KAGI+ + +RRV C + F + + + +L+ V G GD+ AV IK +D ++P+ +WG W+ +S Sbjct: 45 YGSDWLDAKATWYGKPTGAGPDDNGGGCGYKDVNKAPFNSMGACGNVPIFKDGLGCGSCFEIKC-DKPAECSGKPVVVYITDMNYEPI--------------AAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKYGSKVTFHLEKGCNPNYLALLVKYVDGDGDIVAVDIKEKGSDTYEPLKHSWGAIWRKDS 230
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXB10_MAIZE (Expansin-B10 OS=Zea mays GN=EXPB10 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.057e-13 Identity = 57/202 (28.22%), Postives = 92/202 (45.54%), Query Frame = 1 Query: 112 YGQGWTDAHATFYXXXXXXXXXXXXXX--YGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWC--RPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQ-------YKAGIVPVSYRRVPCSRKGGIRFTIN---GHSYFNLVLITNVGGAGDVRAVSIKGSRTD-WQPMSRNWGQNWQSNS 672 YG+ W DA AT+Y Y ++ + + A + +F +G+ CG+CFEIKC + P C +P + +T N+ HFDL+ F +A+ KAGI+ + +RRV C + F + G +Y L L+ V G GD+ AV +K +D ++P+ +WG W+ +S Sbjct: 46 YGKDWLDAKATWYGKPTGAGPDDNGGGCGYKDVNKPPFNSMGACGNIPIFKDGLGCGSCFEIKC-DKPVECSGKPVVVHITDMNYEPI--------------AAYHFDLAGTAFGAMAKKGEEEKLRKAGIIDMQFRRVKCKYDSKVTFHLEKGCGPNYLAL-LVKYVDGDGDIVAVDVKEKGSDTYEPLKHSWGAIWRKDS 231
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13 Identity = 53/195 (27.18%), Postives = 86/195 (44.10%), Query Frame = 1 Query: 124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSEG-YGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQ-------YKAGIVPVSYRRVPCSRKGGIRFTI-----NGHSYFNLVLITNVGGAGDVRAVSI--KGSRTDWQPMSRNWGQNWQ 663 W++ AT+Y Y + + + AA S +++ +G+ CG+C+++KC + C + V T+ C GG C HFDLS F +A AG++ + Y RVPC+ GG+ T + SYF VL+ G GD+ + + G+ W PM ++WG W+ Sbjct: 37 WSNGGATWYGAANGAGSDGGACGYQAAVDQAPFSSMIAAGSPSIYKSGLGCGSCYQVKCSGNSA-CSGNPVTVVLTDEC---------PGGPCLSEPVHFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCN-WGGVMLTFAVDAGSNPSYF-AVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWGAVWK 219
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.246e-13 Identity = 58/191 (30.37%), Postives = 80/191 (41.88%), Query Frame = 1 Query: 124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSE-GYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIA-------QYKAGIVPVSYRRVPCSRKG-GIRFTIN-GHSYFNLVLITNV-GGAGDVRAVSIK-GSRTDWQPMSRNWGQNW 660 W A AT+Y YG L T A+S LF G CGAC++++C+ D C ++ V T+ C GG C + HFDLS F ++A G + V YRR C G I F +N G + F L L+ G GD+ ++ +K + WQ M WG W Sbjct: 45 WHPATATWYGSADGDGSDGGACGYGTLVDVVPMKTRVGAVSPVLFKGGEGCGACYKVRCL-DASICSRRAVTVIVTDEC---------PGGVCAFGRTHFDLSGAAFARLAVAGHGGQLQNRGEISVVYRRTACKYGGKNIAFHVNEGSTTFWLSLLVEFEDGDGDIGSMQLKQANSAQWQDMKHIWGATW 225
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXB17_ORYSJ (Expansin-B17 OS=Oryza sativa subsp. japonica GN=EXPB17 PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.526e-12 Identity = 58/191 (30.37%), Postives = 82/191 (42.93%), Query Frame = 1 Query: 124 WTDAHATFYXXXXXXXXXXXXXXYGNLYSE-GYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKA-------GIVPVSYRRVPCSRKG-GIRFTIN-GHSYFNLVLITNV-GGAGDVRAVSIK-GSRTDWQPMSRNWGQNW 660 W A AT+Y YG+L ++S LF +G CGAC+++KC+ D C ++ V T+ C GG C + HFDLS F ++A A G + V YRR C G I F +N G + F L L+ G GD+ ++ IK + +W M WG W Sbjct: 48 WRPATATWYGDAEGDGSTGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKVKCL-DHGICSRRAVTVIVTDEC---------PGGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSVVYRRTACKYGGKNIAFRVNEGSTNFWLSLLVEFEDGQGDIGSMQIKQANSVEWLDMKHVWGATW 228
BLAST of CN185285 vs. ExPASy Swiss-Prot
Match: EXB10_ORYSJ (Expansin-B10 OS=Oryza sativa subsp. japonica GN=EXPB10 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 55/200 (27.50%), Postives = 87/200 (43.50%), Query Frame = 1 Query: 112 YGQGWTDAHATFYXXXXXXXXXXXXXX--YGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQ-------YKAGIVPVSYRRVPCSRKGGIRFTI-----NGHSYFNLVLITNVGGAGDVRAVSI--KGSRTDWQPMSRNWGQNWQ 663 YG+ W +A T+Y Y ++ + + + +F +G CG+CFE+KC + P C + + T+ HFDLS F +A+ KAGI+ + +RRV C G + T + +YF VL+ VGG GDV V + KGS +W+P++ +WG W+ Sbjct: 37 YGKQWLEARGTWYGKPKGAGPDDNGGACGYKDIDKAPFLGMNSCGNDPIFKDGKGCGSCFEVKC-SKPEACSDKPVIIHITDMNTEPI------------AAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQFRRVRCKYPGETKVTFHVEKGSNPNYF-AVLVKYVGGDGDVVKVELKEKGSE-EWKPLNESWGAIWR 221 The following BLAST results are available for this feature:
BLAST of CN185285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185285 ID=CN185285; Name=CN185285; organism=Citrus sinensis; type=EST; length=696bpback to top |