CN185231
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: PRP31_YEAST (Pre-mRNA-processing factor 31 OS=Saccharomyces cerevisiae GN=PRP31 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.710e-12 Identity = 45/154 (29.22%), Postives = 77/154 (50.00%), Query Frame = 3 Query: 189 HNFIRDKYRLKFPELESLVHHPIDYARVVKKIGNE------MDLTLVDLEGL--LPSAIIMVVSVTASTTSGKPLPEDVFQRT--IXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 620 HNF+ Y +FPEL SL+ P+ Y++V+ + NE D LE L I+V++++ T+ P D+ RT + ++ S++S IAPN+ +VG +AA+L+ AGG+ +++P+CN+ +G K Sbjct: 113 HNFLISLYSRRFPELSSLIPSPLQYSKVISILENENYSKNESDELFFHLENKAKLTREQILVLTMSMKTSFKNKEPLDIKTRTQILEANSILENLWKLQEDIGQYIASKISIIAPNVCFLVGPEIAAQLIAHAGGVLEFSRIPSCNIASIGKNK 266
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: NOP58_YEAST (Nucleolar protein 58 OS=Saccharomyces cerevisiae GN=NOP58 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.710e-12 Identity = 42/140 (30.00%), Postives = 66/140 (47.14%), Query Frame = 3 Query: 201 RDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 620 ++ Y FPEL +V + YAR++ +G + DL +LP I V A + G + + ++ +RM IAPNL+ +VG V A+L+ +G L +LAK PA +Q+LGA+K Sbjct: 185 KEWYGWHFPELAKIVTDSVAYARIILTMGIRSKASETDLSEILPEEIEERVKTAAEVSMGTEITQTDLDNINALAEQIVEFAAYREQLSNYLSARMKAIAPNLTQLVGELVGARLIAHSGSLISLAKSPASTIQILGAEK 324
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: NOP58_YEAS7 (Nucleolar protein 58 OS=Saccharomyces cerevisiae (strain YJM789) GN=NOP58 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.710e-12 Identity = 42/140 (30.00%), Postives = 66/140 (47.14%), Query Frame = 3 Query: 201 RDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 620 ++ Y FPEL +V + YAR++ +G + DL +LP I V A + G + + ++ +RM IAPNL+ +VG V A+L+ +G L +LAK PA +Q+LGA+K Sbjct: 185 KEWYGWHFPELAKIVTDSVAYARIILTMGIRSKASETDLSEILPEEIEERVKTAAEVSMGTEITQTDLDNINALAEQIVEFAAYREQLSNYLSARMKAIAPNLTQLVGELVGARLIAHSGSLISLAKSPASTIQILGAEK 324
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: NOP5A_ARATH (Probable nucleolar protein 5-1 OS=Arabidopsis thaliana GN=NOP5-1 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 8.266e-12 Identity = 44/141 (31.21%), Postives = 68/141 (48.23%), Query Frame = 3 Query: 198 IRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 620 +R+ + FPEL +V I YA+ VK +GN ++ +D +L I + A + G + + +++SRM+ IAPNL+A+VG V A+L+ G L LAK P VQ+LGA+K Sbjct: 181 VREWFGWHFPELAKIVQDNILYAKAVKLMGNRINAAKLDFSEILADEIEAELKEAAVISMGTEVSDLDLLHIRELCDQVLSLAEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLISHGGSLLNLAKQPGSTVQILGAEK 321
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: NOP58_MACFA (Nucleolar protein 58 OS=Macaca fascicularis GN=NOP58 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.266e-12 Identity = 41/140 (29.29%), Postives = 67/140 (47.86%), Query Frame = 3 Query: 201 RDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 620 R+ Y FPEL ++ + Y + ++K+G+ + L LLP + V A + G + E+ + ++++RM IAPN++ +VG V A+L+ AG L LAK A VQ+LGA+K Sbjct: 184 REWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASAKLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEK 323
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: NOP58_HUMAN (Nucleolar protein 58 OS=Homo sapiens GN=NOP58 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.266e-12 Identity = 41/140 (29.29%), Postives = 67/140 (47.86%), Query Frame = 3 Query: 201 RDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 620 R+ Y FPEL ++ + Y + ++K+G+ + L LLP + V A + G + E+ + ++++RM IAPN++ +VG V A+L+ AG L LAK A VQ+LGA+K Sbjct: 184 REWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASAKLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEK 323
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: NOP58_ASHGO (Nucleolar protein 58 OS=Ashbya gossypii GN=NOP58 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.266e-12 Identity = 42/140 (30.00%), Postives = 66/140 (47.14%), Query Frame = 3 Query: 201 RDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 620 ++ Y FPEL +V + +AR++ +G + D+ +LP I V A + G + + ++ SRM IAPNL+ +VG V A+L+ AG L +LAK PA +Q+LGA+K Sbjct: 185 KEWYGWHFPELAKIVTDSVAFARIILTMGVRSNAAETDMSEILPEEIEERVKSAAEVSMGTEITQVDLDNIKSLAEQIVEFAAYREQLSNYLSSRMKAIAPNLTQLVGELVGARLIAHAGSLVSLAKAPASTIQILGAEK 324
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: NOP58_KLULA (Nucleolar protein 58 OS=Kluyveromyces lactis GN=NOP58 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.080e-11 Identity = 42/140 (30.00%), Postives = 66/140 (47.14%), Query Frame = 3 Query: 201 RDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 620 ++ Y FPEL +V + YAR++ +G ++ D+ +LP I V A + G + ++ SRM IAPNL+ +VG V A+L+ +G L +LAK PA +Q+LGA+K Sbjct: 185 KEWYGWHFPELAKIVTDSVAYARIILTMGIRVNAAETDMSEILPEEIEERVKTAAEVSMGTEITPVDLINIKCLAEQIVEFAAYREQLSNYLSSRMKAIAPNLTQLVGELVGARLIAHSGSLISLAKSPASTIQILGAEK 324
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: NOP58_CANGA (Nucleolar protein 58 OS=Candida glabrata GN=NOP58 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.080e-11 Identity = 43/140 (30.71%), Postives = 65/140 (46.43%), Query Frame = 3 Query: 201 RDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 620 ++ Y FPEL +V + YAR++ +G D+ +LP I V A + G + + ++ SRM IAPNL+ +VG V A+L+ AG L +LAK PA +Q+LGA+K Sbjct: 185 KEWYGWHFPELAKIVTDSVAYARLILTMGVRSKAAETDMSEILPEEIEERVKAAAEVSMGTEITDVDLINIRALADQIVEFAAYREQLSNYLSSRMKAIAPNLTQLVGELVGARLIAHAGSLISLAKSPASTIQILGAEK 324
BLAST of CN185231 vs. ExPASy Swiss-Prot
Match: NOP5B_ARATH (Probable nucleolar protein 5-2 OS=Arabidopsis thaliana GN=NOP5-2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.141e-11 Identity = 43/141 (30.50%), Postives = 68/141 (48.23%), Query Frame = 3 Query: 198 IRDKYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLPEDVFQRTIXXXXXXXXXXXXXXXXXXFVESRMSYIAPNLSAIVGSAVAAKLMGTAGGLSALAKMPACNVQLLGAKK 620 +R+ Y FPEL ++ I YA+ VK +GN ++ +D +L I + A + G + + +++SRM+ IAPNL+A+VG V A+L+ G L L+K P VQ+LGA+K Sbjct: 182 VREWYGWHFPELAKIISDNILYAKSVKLMGNRVNAAKLDFSEILADEIEADLKDAAVISMGTEVSDLDLLHIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLISHGGSLLNLSKQPGSTVQILGAEK 322 The following BLAST results are available for this feature:
BLAST of CN185231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185231 ID=CN185231; Name=CN185231; organism=Citrus sinensis; type=EST; length=637bpback to top |