CN185229
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACTT1_MOUSE (Actin-related protein T1 OS=Mus musculus GN=Actrt1 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.634e-48 Identity = 97/186 (52.15%), Postives = 125/186 (67.20%), Query Frame = 3 Query: 99 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 656 D ++ DNG+G+ K G +G+ PR V S+VG P+ +K +VG+EAQ L L YPIE G+V+ WDDMEK+W F EL V P E PV +TE LNP+ REK T+IMFE FNVPA+Y+ AV +L AS TG+VLDSGDGV+ TVP+YEGY+LPHAI +L +AGRD+T+ L Sbjct: 8 DNPAVIFDNGSGLCKVGISGEIEPRHVINSVVGHPKFNIPSARSNRKRYFVGEEAQCMYDGLYLHYPIERGLVTRWDDMEKLWKDLFEWELGVKPNEQPVFMTEPSLNPQETREKTTEIMFEKFNVPALYLCNHAVGALCASACITGLVLDSGDGVTCTVPVYEGYSLPHAITKLYVAGRDITEHL 193
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARPM1_HUMAN (Actin-related protein M1 OS=Homo sapiens GN=ARPM1 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.493e-48 Identity = 90/183 (49.18%), Postives = 132/183 (72.13%), Query Frame = 3 Query: 108 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 656 P+V DNG+GM+KAG AG P+ ++P+I+GR + G + VGD+AQ R L + YP+E G++++W+DME +W H + L++ P + PVL+TE LNP ANR+++T++ FE VPA Y++IQAVL+L+A+G TTG+VL+SG GV+ +VPI+EGY LPH + +LDLAG DLT+ L Sbjct: 7 PVVIDNGSGMIKAGVAGCREPQFIYPNIIGRAKGQS-RAAQGGLELCVGDQAQDWRSSLFISYPVERGLITSWEDMEIMWKHIYDYNLKLKPCDGPVLITEPALNPLANRQQITEMFFEHLGVPAFYMSIQAVLALFAAGFTTGLVLNSGAGVTQSVPIFEGYCLPHGVQQLDLAGLDLTNYL 188
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACTT1_RAT (Actin-related protein T1 OS=Rattus norvegicus GN=Actrt1 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.001e-47 Identity = 97/186 (52.15%), Postives = 124/186 (66.67%), Query Frame = 3 Query: 99 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 656 D ++ DNG+G+ K G +G+ PR V S+VG P+ +K +VG+EAQ L L YPIE G+V+ WDDMEK+W F EL V P E PV +TE LNP+ REK T+IMFE FNVPA+Y+ AV +L AS TG+VLDSGDGV+ TVPIYEGY+LP AI +L +AGRD+T+ L Sbjct: 8 DNPAVIFDNGSGLCKVGISGEIVPRHVINSVVGHPKFNIPSARSNRKRYFVGEEAQCMYDGLYLHYPIERGLVTRWDDMEKLWKDLFEWELGVKPNEQPVFMTEPSLNPRETREKTTEIMFEKFNVPALYLCNHAVGALCASACITGLVLDSGDGVTCTVPIYEGYSLPRAITKLYVAGRDITEHL 193
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARP2_YEAST (Actin-related protein 2 OS=Saccharomyces cerevisiae GN=ARP2 PE=1 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 4.968e-47 Identity = 91/184 (49.46%), Postives = 123/184 (66.85%), Query Frame = 3 Query: 108 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP---RHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEH-PVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 647 P+V D GTG VK G AG++ P FPSIVGRP V KD +GDEA R L + YP+E+GI+ NW DME +W + F+ ++++ + +LLTE P+NP NREKM ++MFE ++ +YVAIQAVL+LYA G ++G+V+DSGDGV+H VP+YE L H RLD+AGRD+T Sbjct: 6 PIVLDQGTGFVKIGRAGENFPDYTFPSIVGRPILRAEERASVATPLKDIMIGDEASEVRSYLQISYPMENGIIKNWTDMELLWDYAFFEQMKLPSTSNGKILLTEPPMNPLKNREKMCEVMFEKYDFGGVYVAIQAVLALYAQGLSSGVVVDSGDGVTHIVPVYESVVLSHLTRRLDVAGRDVT 189
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACTT1_MACFA (Actin-related protein T1 OS=Macaca fascicularis GN=ACTRT1 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.224e-45 Identity = 90/186 (48.39%), Postives = 125/186 (67.20%), Query Frame = 3 Query: 99 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 656 D+ ++ DNG+G+ KAG +G+ PR V S++G + + Q +VG EA K L L YPI+ G+V+ WDDMEK+W H F EL V P + PVL+TE LNP+ REK+ ++MFE F+VP Y++ AV +LYAS TG+V+DSGDGV+ VPI+EGY+LPHA+ +L AGRD+T+ L Sbjct: 8 DVPAVIFDNGSGLCKAGVSGEIGPRHVINSVLGHRKFNMPSARLNQY--FVGQEALYKFDALHLHYPIKRGLVTGWDDMEKLWKHLFEWELGVKPSQQPVLMTEPSLNPREIREKLAEMMFENFSVPGFYLSNHAVAALYASACVTGLVVDSGDGVTCAVPIFEGYSLPHAVTKLYTAGRDITEHL 191
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ARPM1_MOUSE (Actin-related protein M1 homolog OS=Mus musculus GN=Arpm1 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 7.931e-45 Identity = 85/184 (46.20%), Postives = 129/184 (70.11%), Query Frame = 3 Query: 108 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR-HTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 656 P+V DNG+GM+KAG AG P+ V+P+I+GR + HT +++ VGD+AQ +R L++ YP+E G++S+W DME +W H + L + + PVL+TE LNP A+R+ ++++ FE VPA Y++ QAVL+L+A+G TTG+VL+SG G++ VPI+EGY L H + +L++AG DLT L Sbjct: 7 PVVIDNGSGMIKAGLAGTREPQFVYPNILGRSKGHTAD----SRQELCVGDQAQERRSFLSISYPVERGLISSWGDMEIMWKHIYDYNLNLNASDGPVLVTEPALNPLADRQHISEVFFENLGVPAFYMSAQAVLALFAAGFTTGLVLNSGAGITQCVPIFEGYCLSHGVKQLNVAGSDLTSYL 186
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACT_CHERU (Actin (Fragment) OS=Chenopodium rubrum PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.145e-43 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 3 Query: 339 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 593 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG Sbjct: 1 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 85
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACL7A_MACFA (Actin-like protein 7A OS=Macaca fascicularis GN=ACTL7A PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.332e-43 Identity = 84/184 (45.65%), Postives = 119/184 (64.67%), Query Frame = 3 Query: 96 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 647 E + +V D GTG K GFAG P ++VG+P G +K+ +VG E + L L P+ HGI+ +WD ++ IW + F E+++APEEH VL+++ PL+P NREK +++FE FN PAM++A Q+ LS+Y+ GRT+G+V++ G GVS+ VPIYEGY LP RLD AG DLT Sbjct: 67 EVTKAVVVDLGTGYCKCGFAGLPRPTHKISTMVGKPYMETAKTGDNRKETFVGQELNNTNVHLKLVNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFEAFNTPAMHIAYQSRLSMYSYGRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSDLT 250
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACL7A_RAT (Actin-like protein 7A OS=Rattus norvegicus GN=Actl7a PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.352e-43 Identity = 86/187 (45.99%), Postives = 121/187 (64.71%), Query Frame = 3 Query: 96 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 656 E + +V D GTG K GFAG P + VG+P G +K+ +VG E + L L P+ HGI+ +WD ++ IW + F E+++APEEH VL+++ PL+P NREK +++FETFN PAM++A Q+ LS+Y+ GRT+G+V++ G GVS+ VPIYEGY LP RLD AG DLT+ L Sbjct: 72 EVTKAVVVDLGTGFCKCGFAGLPKPTHKISTTVGKPYMETAKTGDNRKETFVGRELFNPDIHLKLVNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFETFNTPAMHIAYQSRLSMYSYGRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSDLTNYL 258
BLAST of CN185229 vs. ExPASy Swiss-Prot
Match: ACL7A_MOUSE (Actin-like protein 7A OS=Mus musculus GN=Actl7a PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.684e-43 Identity = 86/187 (45.99%), Postives = 120/187 (64.17%), Query Frame = 3 Query: 96 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 656 E + +V D GTG K GFAG P + VG+P G +K+ +VG E + L L P+ HGI+ +WD ++ IW + F E+++APEEH VL+++ PL+P NREK +++FETFN PAM++A Q+ LS+Y+ GRT+G+V++ G GVS+ VPIYEGY LP RLD AG DLT L Sbjct: 72 EVTKAVVVDLGTGFCKCGFAGLPKPTHKISTTVGKPYMETAKTGDNRKETFVGHELFNPDIHLKLVNPLRHGIIVDWDTVQDIWEYLFRQEMKIAPEEHAVLVSDPPLSPHTNREKYAEMLFETFNTPAMHIAYQSRLSMYSYGRTSGLVVEVGHGVSYVVPIYEGYPLPSITGRLDYAGSDLTTYL 258 The following BLAST results are available for this feature:
BLAST of CN185229 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 473
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185229 ID=CN185229; Name=CN185229; organism=Citrus sinensis; type=EST; length=656bpback to top |